Merge pull request #21790 from github/redsun82/codeql-cli-2.25.3

Fix `build mode` to `build-mode` in docs

.bazelrc

@@ -11,6 +11,8 @@ build --compilation_mode opt
 common --override_module=semmle_code=%workspace%/misc/bazel/semmle_code_stub
 
 build --repo_env=CC=clang --repo_env=CXX=clang++
+# Disable Android SDK auto-detection (we don't use it, and rules_android has Bazel 9 compatibility issues)
+build --repo_env=ANDROID_HOME=
 
 # print test output, like sembuild does.
 # Set to `errors` if this is too verbose.
@@ -30,8 +32,11 @@ common --registry=https://bcr.bazel.build
 
 common --@rules_dotnet//dotnet/settings:strict_deps=false
 
+# we only configure a nightly toolchain
+common --@rules_rust//rust/toolchain/channel=nightly
+
 # Reduce this eventually to empty, once we've fixed all our usages of java, and https://github.com/bazel-contrib/rules_go/issues/4193 is fixed
-common --incompatible_autoload_externally="+@rules_java,+@rules_shell"
+common --incompatible_autoload_externally="+@rules_cc,+@rules_java,+@rules_shell"
 
 build --java_language_version=17
 build --tool_java_language_version=17

.bazelversion

@@ -1 +1 @@
-8.1.1
+9.0.0

.gitattributes

@@ -82,9 +82,6 @@
 /csharp/paket.main.bzl linguist-generated=true
 /csharp/paket.main_extension.bzl linguist-generated=true
 
-# ripunzip tool
-/misc/ripunzip/ripunzip-* filter=lfs diff=lfs merge=lfs -text
-
 # swift prebuilt resources
 /swift/third_party/resources/*.zip filter=lfs diff=lfs merge=lfs -text
 /swift/third_party/resources/*.tar.zst filter=lfs diff=lfs merge=lfs -text

.github/dependabot.yml

@@ -40,3 +40,10 @@ updates:
       - dependency-name: "*"
     reviewers:
       - "github/codeql-go"
+
+  - package-ecosystem: bazel
+    directory: "/"
+    schedule:
+      interval: weekly
+    exclude-paths:
+      - "misc/bazel/registry/**"

.github/instructions/expected-files.instructions.md

@@ -0,0 +1,4 @@
+---
+applyTo: "**/*.expected"
+---
+Ignore these files. These are generated to be correct by running the tests, and should not be edited manually.

.github/instructions/ql-files.instructions.md

@@ -0,0 +1,6 @@
+---
+applyTo: "**/*.ql,**/*.qll"
+---
+When reviewing these QL files, do not make any comment on the code itself. You don't understand the QL programming language well enough yet. You can only make comments about the following aspects:
+* comments (lines starting with `//` or block comments enclosed in `/* ... */`): you can suggest improvements to the clarity of comments, or point out spelling mistakes
+* typos in identifiers

.github/workflows/build-ripunzip.yml

@@ -1,74 +0,0 @@
-name: Build runzip
-
-on:
-  workflow_dispatch:
-    inputs:
-      ripunzip-version:
-        description: "what reference to checktout from google/runzip"
-        required: false
-        default: v1.2.1
-      openssl-version:
-        description: "what reference to checkout from openssl/openssl for Linux"
-        required: false
-        default: openssl-3.3.0
-
-jobs:
-  build:
-    strategy:
-      fail-fast: false
-      matrix:
-        os: [ubuntu-22.04, macos-13, windows-2019]
-    runs-on: ${{ matrix.os }}
-    steps:
-      - uses: actions/checkout@v4
-        with:
-          repository: google/ripunzip
-          ref: ${{ inputs.ripunzip-version }}
-      # we need to avoid ripunzip dynamically linking into libssl
-      # see https://github.com/sfackler/rust-openssl/issues/183
-      - if: runner.os == 'Linux'
-        name: checkout openssl
-        uses: actions/checkout@v4
-        with:
-          repository: openssl/openssl
-          path: openssl
-          ref: ${{ inputs.openssl-version }}
-      - if: runner.os == 'Linux'
-        name: build and install openssl with fPIC
-        shell: bash
-        working-directory: openssl
-        run: |
-          ./config -fPIC --prefix=$HOME/.local --openssldir=$HOME/.local/ssl
-          make -j $(nproc)
-          make install_sw -j $(nproc)
-      - if: runner.os == 'Linux'
-        name: build (linux)
-        shell: bash
-        run: |
-          env OPENSSL_LIB_DIR=$HOME/.local/lib64 OPENSSL_INCLUDE_DIR=$HOME/.local/include OPENSSL_STATIC=yes cargo build --release
-          mv target/release/ripunzip ripunzip-linux
-      - if: runner.os == 'Windows'
-        name: build (windows)
-        shell: bash
-        run: |
-          cargo build --release
-          mv target/release/ripunzip ripunzip-windows
-      - name: build (macOS)
-        if: runner.os == 'macOS'
-        shell: bash
-        run: |
-          rustup target install x86_64-apple-darwin
-          rustup target install aarch64-apple-darwin
-          cargo build --target x86_64-apple-darwin --release
-          cargo build --target aarch64-apple-darwin --release
-          lipo -create -output ripunzip-macos \
-            -arch x86_64 target/x86_64-apple-darwin/release/ripunzip \
-            -arch arm64 target/aarch64-apple-darwin/release/ripunzip
-      - uses: actions/upload-artifact@v4
-        with:
-          name: ripunzip-${{ runner.os }}
-          path: ripunzip-*
-      - name: Check built binary
-        shell: bash
-        run: |
-          ./ripunzip-* --version

.github/workflows/buildifier.yml

@@ -17,7 +17,7 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - name: Checkout
-        uses: actions/checkout@v4
+        uses: actions/checkout@v5
       - name: Check bazel formatting
         uses: pre-commit/action@646c83fcd040023954eafda54b4db0192ce70507
         with:

.github/workflows/check-change-note.yml

@@ -16,7 +16,6 @@ on:
       - "shared/**/*.qll"
       - "!**/experimental/**"
       - "!ql/**"
-      - "!rust/**"
       - ".github/workflows/check-change-note.yml"
 
 jobs:

.github/workflows/check-implicit-this.yml

@@ -16,7 +16,7 @@ jobs:
   check:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
       - name: Check that implicit this warnings is enabled for all packs
         shell: bash
         run: |

.github/workflows/check-overlay-annotations.yml

@@ -0,0 +1,23 @@
+name: Check overlay annotations
+
+on:
+  push:
+    branches:
+      - main
+      - 'rc/*'
+  pull_request:
+    branches:
+      - main
+      - 'rc/*'
+
+permissions:
+  contents: read
+
+jobs:
+  sync:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v5
+      - name: Check overlay annotations
+        run: python config/add-overlay-annotations.py --check java
+

.github/workflows/check-qldoc.yml

@@ -18,7 +18,7 @@ jobs:
     runs-on: ubuntu-latest
 
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
         with:
           fetch-depth: 2
 

.github/workflows/check-query-ids.yml

@@ -19,6 +19,6 @@ jobs:
     name: Check query IDs
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
       - name: Check for duplicate query IDs
         run: python3 misc/scripts/check-query-ids.py

.github/workflows/codegen.yml

@@ -1,34 +0,0 @@
-name: Codegen
-
-on:
-  pull_request:
-    paths:
-      - "misc/bazel/**"
-      - "misc/codegen/**"
-      - "*.bazel*"
-      - .github/workflows/codegen.yml
-      - .pre-commit-config.yaml
-    branches:
-      - main
-      - rc/*
-      - codeql-cli-*
-
-permissions:
-  contents: read
-
-jobs:
-  codegen:
-    runs-on: ubuntu-latest
-    steps:
-      - uses: actions/checkout@v4
-      - uses: actions/setup-python@v4
-        with:
-          python-version-file: 'misc/codegen/.python-version'
-      - uses: pre-commit/action@646c83fcd040023954eafda54b4db0192ce70507
-        name: Check that python code is properly formatted
-        with:
-          extra_args: autopep8 --all-files
-      - name: Run codegen tests
-        shell: bash
-        run: |
-          bazel test //misc/codegen/...

.github/workflows/codeql-analysis.yml

@@ -34,10 +34,10 @@ jobs:
     - name: Setup dotnet
       uses: actions/setup-dotnet@v4
       with:
-        dotnet-version: 9.0.100
+        dotnet-version: 10.0.100
 
     - name: Checkout repository
-      uses: actions/checkout@v4
+      uses: actions/checkout@v5
 
     # Initializes the CodeQL tools for scanning.
     - name: Initialize CodeQL

.github/workflows/compile-queries.yml

@@ -1,46 +0,0 @@
-name: "Compile all queries using the latest stable CodeQL CLI"
-
-on:
-  push:
-    branches:  # makes sure the cache gets populated - running on the branches people tend to merge into.
-      - main
-      - "rc/*"
-      - "codeql-cli-*"
-  pull_request:
-    paths:
-      - '**.ql'
-      - '**.qll'
-      - '**/qlpack.yml'
-      - '**.dbscheme'
-
-permissions:
-  contents: read
-
-jobs:
-  compile-queries:
-    if: github.repository_owner == 'github'
-    runs-on: ubuntu-latest-xl
-
-    steps:
-      - uses: actions/checkout@v4
-      - name: Setup CodeQL
-        uses: ./.github/actions/fetch-codeql
-        with:
-          channel: 'release'
-      - name: Cache compilation cache
-        id: query-cache
-        uses: ./.github/actions/cache-query-compilation
-        with: 
-          key: all-queries
-      - name: check formatting
-        run: find shared */ql -type f \( -name "*.qll" -o -name "*.ql" \) -print0 | xargs -0 -n 3000 -P 10 codeql query format -q --check-only
-      - name: compile queries - check-only
-        # run with --check-only if running in a PR (github.sha != main)
-        if : ${{ github.event_name == 'pull_request' }}
-        shell: bash
-        run: codeql query compile -q -j0 */ql/{src,examples} --keep-going --warnings=error --check-only --compilation-cache "${{ steps.query-cache.outputs.cache-dir }}" --compilation-cache-size=500 --ram=56000
-      - name: compile queries - full
-        # do full compile if running on main - this populates the cache
-        if : ${{ github.event_name != 'pull_request' }}
-        shell: bash
-        run: codeql query compile -q -j0 */ql/{src,examples} --keep-going --warnings=error --compilation-cache "${{ steps.query-cache.outputs.cache-dir }}" --compilation-cache-size=500 --ram=56000

.github/workflows/cpp-swift-analysis.yml

@@ -28,7 +28,7 @@ jobs:
 
     steps:
     - name: Checkout repository
-      uses: actions/checkout@v4
+      uses: actions/checkout@v5
 
     # Initializes the CodeQL tools for scanning.
     - name: Initialize CodeQL

.github/workflows/csharp-qltest.yml

@@ -36,26 +36,26 @@ jobs:
   unit-tests:
     strategy:
       matrix:
-        os: [ubuntu-latest, windows-2019]
+        os: [ubuntu-latest, windows-latest]
     runs-on: ${{ matrix.os }}
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
       - name: Setup dotnet
         uses: actions/setup-dotnet@v4
         with:
-          dotnet-version: 9.0.100
+          dotnet-version: 10.0.100
       - name: Extractor unit tests
         run: |
           dotnet tool restore
-          dotnet test -p:RuntimeFrameworkVersion=9.0.0 extractor/Semmle.Util.Tests
-          dotnet test -p:RuntimeFrameworkVersion=9.0.0 extractor/Semmle.Extraction.Tests
-          dotnet test -p:RuntimeFrameworkVersion=9.0.0 autobuilder/Semmle.Autobuild.CSharp.Tests
-          dotnet test -p:RuntimeFrameworkVersion=9.0.0 autobuilder/Semmle.Autobuild.Cpp.Tests
+          dotnet test -p:RuntimeFrameworkVersion=10.0.0 extractor/Semmle.Util.Tests
+          dotnet test -p:RuntimeFrameworkVersion=10.0.0 extractor/Semmle.Extraction.Tests
+          dotnet test -p:RuntimeFrameworkVersion=10.0.0 autobuilder/Semmle.Autobuild.CSharp.Tests
+          dotnet test -p:RuntimeFrameworkVersion=10.0.0 autobuilder/Semmle.Autobuild.Cpp.Tests
         shell: bash
   stubgentest:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
       - uses: ./csharp/actions/create-extractor-pack
       - name: Run stub generator tests
         run: |
@@ -66,6 +66,6 @@ jobs:
           # Update existing stubs in the repo with the freshly generated ones
           mv "$STUBS_PATH/output/stubs/_frameworks" ql/test/resources/stubs/
           git status
-          codeql test run --threads=0 --search-path "${{ github.workspace }}" --check-databases --check-undefined-labels --check-repeated-labels --check-redefined-labels --consistency-queries ql/consistency-queries -- ql/test/library-tests/dataflow/flowsources/aspremote
+          codeql test run --threads=0 --search-path "${{ github.workspace }}" --check-databases --check-diff-informed --check-undefined-labels --check-repeated-labels --check-redefined-labels --consistency-queries ql/consistency-queries -- ql/test/library-tests/dataflow/flowsources/aspremote
         env:
           GITHUB_TOKEN: ${{ github.token }}

.github/workflows/csv-coverage-metrics.yml

@@ -23,7 +23,7 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - name: Checkout repository
-        uses: actions/checkout@v4
+        uses: actions/checkout@v5
       - name: Setup CodeQL
         uses: ./.github/actions/fetch-codeql
       - name: Create empty database
@@ -51,7 +51,7 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - name: Checkout repository
-        uses: actions/checkout@v4
+        uses: actions/checkout@v5
       - name: Setup CodeQL
         uses: ./.github/actions/fetch-codeql
       - name: Create empty database

.github/workflows/csv-coverage-pr-artifacts.yml

@@ -35,11 +35,11 @@ jobs:
           GITHUB_CONTEXT: ${{ toJSON(github.event) }}
         run: echo "$GITHUB_CONTEXT"
       - name: Clone self (github/codeql) - MERGE
-        uses: actions/checkout@v4
+        uses: actions/checkout@v5
         with:
           path: merge
       - name: Clone self (github/codeql) - BASE
-        uses: actions/checkout@v4
+        uses: actions/checkout@v5
         with:
           fetch-depth: 2
           path: base

.github/workflows/csv-coverage-pr-comment.yml

@@ -24,7 +24,7 @@ jobs:
         GITHUB_CONTEXT: ${{ toJSON(github.event) }}
       run: echo "$GITHUB_CONTEXT"
     - name: Clone self (github/codeql)
-      uses: actions/checkout@v4
+      uses: actions/checkout@v5
     - name: Set up Python 3.8
       uses: actions/setup-python@v4
       with:

.github/workflows/csv-coverage-timeseries.yml

@@ -12,11 +12,11 @@ jobs:
 
     steps:
       - name: Clone self (github/codeql)
-        uses: actions/checkout@v4
+        uses: actions/checkout@v5
         with:
           path: script
       - name: Clone self (github/codeql) for analysis
-        uses: actions/checkout@v4
+        uses: actions/checkout@v5
         with:
           path: codeqlModels
           fetch-depth: 0

.github/workflows/csv-coverage-update.yml

@@ -21,7 +21,7 @@ jobs:
           GITHUB_CONTEXT: ${{ toJSON(github.event) }}
         run: echo "$GITHUB_CONTEXT"
       - name: Clone self (github/codeql)
-        uses: actions/checkout@v4
+        uses: actions/checkout@v5
         with:
           path: ql
           fetch-depth: 0

.github/workflows/csv-coverage.yml

@@ -16,11 +16,11 @@ jobs:
 
     steps:
       - name: Clone self (github/codeql)
-        uses: actions/checkout@v4
+        uses: actions/checkout@v5
         with:
           path: script
       - name: Clone self (github/codeql) for analysis
-        uses: actions/checkout@v4
+        uses: actions/checkout@v5
         with:
           path: codeqlModels
           ref: ${{ github.event.inputs.qlModelShaOverride || github.ref }}

.github/workflows/fast-forward.yml

@@ -26,7 +26,7 @@ jobs:
           exit 1
 
       - name: Checkout
-        uses: actions/checkout@v4
+        uses: actions/checkout@v5
 
       - name: Git config
         shell: bash

.github/workflows/go-tests-other-os.yml

@@ -1,36 +0,0 @@
-name: "Go: Run Tests - Other OS"
-on:
-  pull_request:
-    paths:
-      - "go/**"
-      - "!go/documentation/**"
-      - "!go/ql/**" # don't run other-os if only ql/ files changed
-      - .github/workflows/go-tests-other-os.yml
-      - .github/actions/**
-      - codeql-workspace.yml
-      - MODULE.bazel
-      - .bazelrc
-      - misc/bazel/**
-
-permissions:
-  contents: read
-
-jobs:
-  test-mac:
-    name: Test MacOS
-    runs-on: macos-latest
-    steps:
-      - name: Check out code
-        uses: actions/checkout@v4
-      - name: Run tests
-        uses: ./go/actions/test
-
-  test-win:
-    if: github.repository_owner == 'github'
-    name: Test Windows
-    runs-on: windows-latest-xl
-    steps:
-      - name: Check out code
-        uses: actions/checkout@v4
-      - name: Run tests
-        uses: ./go/actions/test

.github/workflows/go-tests-rtjo.yml

@@ -1,22 +0,0 @@
-name: "Go: Run RTJO Tests"
-on:
-  pull_request:
-    types:
-      - labeled
-
-permissions:
-  contents: read
-
-jobs:
-  test-linux:
-    if: "github.repository_owner == 'github' && github.event.label.name == 'Run: RTJO Language Tests'"
-    name: RTJO Test Linux (Ubuntu)
-    runs-on: ubuntu-latest-xl
-    steps:
-      - name: Check out code
-        uses: actions/checkout@v4
-      - name: Run tests
-        uses: ./go/actions/test
-        with:
-          run-code-checks: true
-          dynamic-join-order-mode: all

.github/workflows/go-tests.yml

@@ -1,20 +1,9 @@
 name: "Go: Run Tests"
 on:
-  push:
-    paths:
-      - "go/**"
-      - "!go/documentation/**"
-      - "shared/**"
-      - .github/workflows/go-tests.yml
-      - .github/actions/**
-      - codeql-workspace.yml
-    branches:
-      - main
-      - "rc/*"
   pull_request:
     paths:
       - "go/**"
-      - "!go/documentation/**"      
+      - "!go/documentation/**"
       - "shared/**"
       - .github/workflows/go-tests.yml
       - .github/actions/**
@@ -33,7 +22,7 @@ jobs:
     runs-on: ubuntu-latest-xl
     steps:
       - name: Check out code
-        uses: actions/checkout@v4
+        uses: actions/checkout@v5
       - name: Run tests
         uses: ./go/actions/test
         with:

.github/workflows/kotlin-build.yml

@@ -20,7 +20,7 @@ jobs:
   build:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
       - run: |
           bazel query //java/kotlin-extractor/...
           # only build the default version as a quick check that we can build from `codeql`

.github/workflows/mad_modelDiff.yml

@@ -28,12 +28,12 @@ jobs:
         slug: ${{fromJson(github.event.inputs.projects || '["apache/commons-codec", "apache/commons-io", "apache/commons-beanutils", "apache/commons-logging", "apache/commons-fileupload", "apache/commons-lang", "apache/commons-validator", "apache/commons-csv", "apache/dubbo"]' )}}
     steps:
       - name: Clone github/codeql from PR
-        uses: actions/checkout@v4
+        uses: actions/checkout@v5
         if: github.event.pull_request
         with:
           path: codeql-pr
       - name: Clone github/codeql from main
-        uses: actions/checkout@v4
+        uses: actions/checkout@v5
         with:
           path: codeql-main
           ref: main
@@ -68,7 +68,7 @@ jobs:
             DATABASE=$2
             cd codeql-$QL_VARIANT
             SHORTNAME=`basename $DATABASE`
-            python java/ql/src/utils/modelgenerator/GenerateFlowModel.py --with-summaries --with-sinks $DATABASE $SHORTNAME/$QL_VARIANT
+            python misc/scripts/models-as-data/generate_mad.py --language java --with-summaries --with-sinks $DATABASE $SHORTNAME/$QL_VARIANT
             mkdir -p $MODELS/$SHORTNAME
             mv java/ql/lib/ext/generated/$SHORTNAME/$QL_VARIANT $MODELS/$SHORTNAME
             cd ..

.github/workflows/mad_regenerate-models.yml

@@ -30,11 +30,11 @@ jobs:
             ref: "placeholder"
     steps:
       - name: Clone self (github/codeql)
-        uses: actions/checkout@v4
+        uses: actions/checkout@v5
       - name: Setup CodeQL binaries
         uses: ./.github/actions/fetch-codeql
       - name: Clone repositories
-        uses: actions/checkout@v4
+        uses: actions/checkout@v5
         with:
           path: repos/${{ matrix.ref }}
           ref: ${{ matrix.ref }}

.github/workflows/python-tooling.yml

@@ -0,0 +1,35 @@
+name: Python tooling
+
+on:
+  pull_request:
+    paths:
+      - "misc/bazel/**"
+      - "misc/codegen/**"
+      - "misc/scripts/models-as-data/bulk_generate_mad.py"
+      - "*.bazel*"
+      - .github/workflows/codegen.yml
+      - .pre-commit-config.yaml
+    branches:
+      - main
+      - rc/*
+      - codeql-cli-*
+
+permissions:
+  contents: read
+
+jobs:
+  check-python-tooling:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v5
+      - uses: actions/setup-python@v5
+        with:
+          python-version: '3.12'
+      - uses: pre-commit/action@646c83fcd040023954eafda54b4db0192ce70507
+        name: Check that python code is properly formatted
+        with:
+          extra_args: black --all-files
+      - name: Run codegen tests
+        shell: bash
+        run: |
+          bazel test //misc/codegen/...

.github/workflows/qhelp-pr-preview.yml

@@ -43,7 +43,7 @@ jobs:
           if-no-files-found: error
           retention-days: 1
 
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
         with:
           fetch-depth: 2
           persist-credentials: false

.github/workflows/ql-for-ql-build.yml

@@ -19,7 +19,7 @@ jobs:
     runs-on: ubuntu-latest-xl
     steps:
       ### Build the queries ###
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
         with:
           fetch-depth: 0
       - name: Find codeql
@@ -27,6 +27,7 @@ jobs:
         uses: github/codeql-action/init@main
         with:
           languages: javascript # does not matter
+          tools: nightly
       - uses: ./.github/actions/os-version
         id: os_version
       ### Build the extractor ###

.github/workflows/ql-for-ql-dataset_measure.yml

@@ -25,7 +25,7 @@ jobs:
           - github/codeql
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
 
       - name: Find codeql
         id: find-codeql
@@ -46,14 +46,14 @@ jobs:
         env:
           CODEQL: ${{ steps.find-codeql.outputs.codeql-path }}
       - name: Checkout ${{ matrix.repo }}
-        uses: actions/checkout@v4
+        uses: actions/checkout@v5
         with:
           repository: ${{ matrix.repo }}
           path: ${{ github.workspace }}/repo
       - name: Create database
         run: |
           "${CODEQL}" database create \
-          --search-path "${{ github.workspace }}"
+          --search-path "${{ github.workspace }}" \
           --threads 4 \
             --language ql --source-root "${{ github.workspace }}/repo" \
             "${{ runner.temp }}/database"
@@ -75,7 +75,7 @@ jobs:
     runs-on: ubuntu-latest
     needs: measure
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
       - uses: actions/download-artifact@v4
         with:
           name: measurements

.github/workflows/ql-for-ql-tests.yml

@@ -24,12 +24,13 @@ jobs:
   qltest:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
       - name: Find codeql
         id: find-codeql
         uses: github/codeql-action/init@main
         with:
           languages: javascript # does not matter
+          tools: nightly
       - uses: ./.github/actions/os-version
         id: os_version
       - uses: actions/cache@v3
@@ -64,7 +65,7 @@ jobs:
     needs: [qltest]
     runs-on: ${{ matrix.os }}
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
       - name: Install GNU tar
         if: runner.os == 'macOS'
         run: |
@@ -75,6 +76,7 @@ jobs:
         uses: github/codeql-action/init@main
         with:
           languages: javascript # does not matter
+          tools: nightly
       - uses: ./.github/actions/os-version
         id: os_version
       - uses: actions/cache@v3

.github/workflows/query-list.yml

@@ -23,7 +23,7 @@ jobs:
 
     steps:
     - name: Clone self (github/codeql)
-      uses: actions/checkout@v4
+      uses: actions/checkout@v5
       with:
         path: codeql 
     - name: Set up Python 3.8
@@ -31,7 +31,7 @@ jobs:
       with:
         python-version: 3.8
     - name: Download CodeQL CLI
-      # Look under the `codeql` directory, as this is where we checked out the `github/codeql` repo
+      # Look under the `codeql` directory, as this is where we checked out the `github/codeql` repo
       uses: ./codeql/.github/actions/fetch-codeql
     - name: Build code scanning query list
       run: |

.github/workflows/ruby-build.yml

@@ -1,236 +0,0 @@
-name: "Ruby: Build"
-
-on:
-  push:
-    paths:
-      - "ruby/**"
-      - .github/workflows/ruby-build.yml
-      - .github/actions/fetch-codeql/action.yml
-      - codeql-workspace.yml
-      - "shared/tree-sitter-extractor/**"
-    branches:
-      - main
-      - "rc/*"
-  pull_request:
-    paths:
-      - "ruby/**"
-      - .github/workflows/ruby-build.yml
-      - .github/actions/fetch-codeql/action.yml
-      - codeql-workspace.yml
-      - "shared/tree-sitter-extractor/**"
-    branches:
-      - main
-      - "rc/*"
-  workflow_dispatch:
-    inputs:
-      tag:
-        description: "Version tag to create"
-        required: false
-
-env:
-  CARGO_TERM_COLOR: always
-
-defaults:
-  run:
-    working-directory: ruby
-
-permissions:
-  contents: read
-
-jobs:
-  build:
-    strategy:
-      fail-fast: false
-      matrix:
-        os: [ubuntu-latest, macos-latest, windows-latest]
-
-    runs-on: ${{ matrix.os }}
-
-    steps:
-      - uses: actions/checkout@v4
-      - name: Install GNU tar
-        if: runner.os == 'macOS'
-        run: |
-          brew install gnu-tar
-          echo "/usr/local/opt/gnu-tar/libexec/gnubin" >> $GITHUB_PATH
-      - name: Prepare Windows
-        if: runner.os == 'Windows'
-        shell: powershell
-        run: |
-          git config --global core.longpaths true
-      - uses: ./.github/actions/os-version
-        id: os_version
-      - name: Cache entire extractor
-        uses: actions/cache@v3
-        id: cache-extractor
-        with:
-          path: |
-            target/release/codeql-extractor-ruby
-            target/release/codeql-extractor-ruby.exe
-            ruby/extractor/ql/lib/codeql/ruby/ast/internal/TreeSitter.qll
-          key: ${{ runner.os }}-${{ steps.os_version.outputs.version }}-ruby-extractor-${{ hashFiles('ruby/extractor/rust-toolchain.toml', 'ruby/extractor/Cargo.lock') }}-${{ hashFiles('shared/tree-sitter-extractor') }}-${{ hashFiles('ruby/extractor/**/*.rs') }}
-      - uses: actions/cache@v3
-        if: steps.cache-extractor.outputs.cache-hit != 'true'
-        with:
-          path: |
-            ~/.cargo/registry
-            ~/.cargo/git
-            target
-          key: ${{ runner.os }}-${{ steps.os_version.outputs.version }}-ruby-rust-cargo-${{ hashFiles('ruby/extractor/rust-toolchain.toml', 'ruby/extractor/**/Cargo.lock') }}
-      - name: Check formatting
-        if: steps.cache-extractor.outputs.cache-hit != 'true'
-        run: cd extractor && cargo fmt -- --check
-      - name: Build
-        if: steps.cache-extractor.outputs.cache-hit != 'true'
-        run: cd extractor && cargo build --verbose
-      - name: Run tests
-        if: steps.cache-extractor.outputs.cache-hit != 'true'
-        run: cd extractor && cargo test --verbose
-      - name: Release build
-        if: steps.cache-extractor.outputs.cache-hit != 'true'
-        run: cd extractor && cargo build --release
-      - name: Generate dbscheme
-        if: ${{ matrix.os == 'ubuntu-latest' && steps.cache-extractor.outputs.cache-hit != 'true'}}
-        run: ../target/release/codeql-extractor-ruby generate --dbscheme ql/lib/ruby.dbscheme --library ql/lib/codeql/ruby/ast/internal/TreeSitter.qll
-      - uses: actions/upload-artifact@v4
-        if: ${{ matrix.os == 'ubuntu-latest' }}
-        with:
-          name: ruby.dbscheme
-          path: ruby/ql/lib/ruby.dbscheme
-      - uses: actions/upload-artifact@v4
-        if: ${{ matrix.os == 'ubuntu-latest' }}
-        with:
-          name: TreeSitter.qll
-          path: ruby/ql/lib/codeql/ruby/ast/internal/TreeSitter.qll
-      - uses: actions/upload-artifact@v4
-        with:
-          name: extractor-${{ matrix.os }}
-          path: |
-            target/release/codeql-extractor-ruby
-            target/release/codeql-extractor-ruby.exe
-          retention-days: 1
-  compile-queries:
-    if: github.repository_owner == 'github'
-    runs-on: ubuntu-latest-xl
-    steps:
-      - uses: actions/checkout@v4
-      - name: Fetch CodeQL
-        uses: ./.github/actions/fetch-codeql
-      - name: Cache compilation cache
-        id: query-cache
-        uses: ./.github/actions/cache-query-compilation
-        with:
-          key: ruby-build
-      - name: Build Query Pack
-        run: |
-          PACKS=${{ runner.temp }}/query-packs
-          rm -rf $PACKS
-          codeql pack create ../misc/suite-helpers --output "$PACKS"
-          codeql pack create ../shared/regex --output "$PACKS"
-          codeql pack create ../shared/ssa --output "$PACKS"
-          codeql pack create ../shared/tutorial --output "$PACKS"
-          codeql pack create ql/lib --output "$PACKS"
-          codeql pack create -j0 ql/src --output "$PACKS" --compilation-cache "${{ steps.query-cache.outputs.cache-dir }}"
-          PACK_FOLDER=$(readlink -f "$PACKS"/codeql/ruby-queries/*)
-          codeql generate query-help --format=sarifv2.1.0 --output="${PACK_FOLDER}/rules.sarif" ql/src
-          (cd ql/src; find queries \( -name '*.qhelp' -o -name '*.rb' -o -name '*.erb' \) -exec bash -c 'mkdir -p "'"${PACK_FOLDER}"'/$(dirname "{}")"' \; -exec cp "{}" "${PACK_FOLDER}/{}" \;)
-      - uses: actions/upload-artifact@v4
-        with:
-          name: codeql-ruby-queries
-          path: |
-            ${{ runner.temp }}/query-packs/*
-          retention-days: 1
-          include-hidden-files: true
-
-  package:
-    runs-on: ubuntu-latest
-    needs: [build, compile-queries]
-    steps:
-      - uses: actions/checkout@v4
-      - uses: actions/download-artifact@v4
-        with:
-          name: ruby.dbscheme
-          path: ruby/ruby
-      - uses: actions/download-artifact@v4
-        with:
-          name: extractor-ubuntu-latest
-          path: ruby/linux64
-      - uses: actions/download-artifact@v4
-        with:
-          name: extractor-windows-latest
-          path: ruby/win64
-      - uses: actions/download-artifact@v4
-        with:
-          name: extractor-macos-latest
-          path: ruby/osx64
-      - run: |
-          mkdir -p ruby
-          cp -r codeql-extractor.yml tools ql/lib/ruby.dbscheme.stats ruby/
-          mkdir -p ruby/tools/{linux64,osx64,win64}
-          cp linux64/codeql-extractor-ruby ruby/tools/linux64/extractor
-          cp osx64/codeql-extractor-ruby ruby/tools/osx64/extractor
-          cp win64/codeql-extractor-ruby.exe ruby/tools/win64/extractor.exe
-          chmod +x ruby/tools/{linux64,osx64}/extractor
-          zip -rq codeql-ruby.zip ruby
-      - uses: actions/upload-artifact@v4
-        with:
-          name: codeql-ruby-pack
-          path: ruby/codeql-ruby.zip
-          retention-days: 1
-          include-hidden-files: true
-      - uses: actions/download-artifact@v4
-        with:
-          name: codeql-ruby-queries
-          path: ruby/qlpacks
-      - run: |
-          echo '{
-            "provide": [
-            "ruby/codeql-extractor.yml",
-            "qlpacks/*/*/*/qlpack.yml"
-            ]
-          }' > .codeqlmanifest.json
-          zip -rq codeql-ruby-bundle.zip .codeqlmanifest.json ruby qlpacks
-      - uses: actions/upload-artifact@v4
-        with:
-          name: codeql-ruby-bundle
-          path: ruby/codeql-ruby-bundle.zip
-          retention-days: 1
-          include-hidden-files: true
-
-  test:
-    defaults:
-      run:
-        working-directory: ${{ github.workspace }}
-    strategy:
-      fail-fast: false
-      matrix:
-        os: [ubuntu-latest, macos-latest, windows-latest]
-
-    runs-on: ${{ matrix.os }}
-    needs: [package]
-    steps:
-      - uses: actions/checkout@v4
-      - name: Fetch CodeQL
-        uses: ./.github/actions/fetch-codeql
-
-      - name: Download Ruby bundle
-        uses: actions/download-artifact@v4
-        with:
-          name: codeql-ruby-bundle
-          path: ${{ runner.temp }}
-      - name: Unzip Ruby bundle
-        shell: bash
-        run: unzip -q -d "${{ runner.temp }}/ruby-bundle" "${{ runner.temp }}/codeql-ruby-bundle.zip"
-
-      - name: Run QL test
-        shell: bash
-        run: |
-          codeql test run --search-path "${{ runner.temp }}/ruby-bundle" --additional-packs "${{ runner.temp }}/ruby-bundle" ruby/ql/test/library-tests/ast/constants/
-      - name: Create database
-        shell: bash
-        run: |
-          codeql database create --search-path "${{ runner.temp }}/ruby-bundle" --language ruby --source-root ruby/ql/test/library-tests/ast/constants/ ../database
-      - name: Analyze database
-        shell: bash
-        run: |
-          codeql database analyze --search-path "${{ runner.temp }}/ruby-bundle" --format=sarifv2.1.0 --output=out.sarif ../database ruby-code-scanning.qls

.github/workflows/ruby-dataset-measure.yml

@@ -1,75 +0,0 @@
-name: "Ruby: Collect database stats"
-
-on:
-  push:
-    branches:
-      - main
-      - "rc/*"
-    paths:
-      - ruby/ql/lib/ruby.dbscheme
-      - .github/workflows/ruby-dataset-measure.yml
-  pull_request:
-    branches:
-      - main
-      - "rc/*"
-    paths:
-      - ruby/ql/lib/ruby.dbscheme
-      - .github/workflows/ruby-dataset-measure.yml
-  workflow_dispatch:
-
-permissions:
-  contents: read
-
-jobs:
-  measure:
-    env:
-      CODEQL_THREADS: 4 # TODO: remove this once it's set by the CLI
-    strategy:
-      fail-fast: false
-      matrix:
-        repo: [rails/rails, discourse/discourse, spree/spree, ruby/ruby]
-    runs-on: ubuntu-latest
-    steps:
-      - uses: actions/checkout@v4
-
-      - uses: ./.github/actions/fetch-codeql
-
-      - uses: ./ruby/actions/create-extractor-pack
-
-      - name: Checkout ${{ matrix.repo }}
-        uses: actions/checkout@v4
-        with:
-          repository: ${{ matrix.repo }}
-          path: ${{ github.workspace }}/repo
-      - name: Create database
-        run: |
-          codeql database create \
-            --search-path "${{ github.workspace }}" \
-            --threads 4 \
-            --language ruby --source-root "${{ github.workspace }}/repo" \
-            "${{ runner.temp }}/database"
-      - name: Measure database
-        run: |
-          mkdir -p "stats/${{ matrix.repo }}"
-          codeql dataset measure --threads 4 --output "stats/${{ matrix.repo }}/stats.xml" "${{ runner.temp }}/database/db-ruby"
-      - uses: actions/upload-artifact@v4
-        with:
-          name: measurements-${{ hashFiles('stats/**') }}
-          path: stats
-          retention-days: 1
-
-  merge:
-    runs-on: ubuntu-latest
-    needs: measure
-    steps:
-      - uses: actions/checkout@v4
-      - uses: actions/download-artifact@v4
-        with:
-          path: stats
-      - run: |
-          python -m pip install --user lxml
-          find stats -name 'stats.xml' | sort | xargs python ruby/scripts/merge_stats.py --output ruby/ql/lib/ruby.dbscheme.stats --normalise ruby_tokeninfo
-      - uses: actions/upload-artifact@v4
-        with:
-          name: ruby.dbscheme.stats
-          path: ruby/ql/lib/ruby.dbscheme.stats

.github/workflows/ruby-qltest-rtjo.yml

@@ -1,40 +0,0 @@
-name: "Ruby: Run RTJO Language Tests"
-
-on:
-  pull_request:
-    types:
-      - opened
-      - synchronize
-      - reopened
-      - labeled
-
-env:
-  CARGO_TERM_COLOR: always
-
-defaults:
-  run:
-    working-directory: ruby
-
-permissions:
-  contents: read
-
-jobs:
-  qltest-rtjo:
-    if: "github.repository_owner == 'github' && github.event.label.name == 'Run: RTJO Language Tests'"
-    runs-on: ubuntu-latest-xl
-    strategy:
-      fail-fast: false
-    steps:
-      - uses: actions/checkout@v4
-      - uses: ./.github/actions/fetch-codeql
-      - uses: ./ruby/actions/create-extractor-pack
-      - name: Cache compilation cache
-        id: query-cache
-        uses: ./.github/actions/cache-query-compilation
-        with:
-          key: ruby-qltest
-      - name: Run QL tests
-        run: |
-          codeql test run --dynamic-join-order-mode=all --threads=0 --ram 50000 --search-path "${{ github.workspace }}" --check-databases --check-undefined-labels --check-unused-labels --check-repeated-labels --check-redefined-labels --check-use-before-definition --consistency-queries ql/consistency-queries ql/test --compilation-cache "${{ steps.query-cache.outputs.cache-dir }}"
-        env:
-          GITHUB_TOKEN: ${{ github.token }}

.github/workflows/ruby-qltest.yml

@@ -1,73 +0,0 @@
-name: "Ruby: Run QL Tests"
-
-on:
-  push:
-    paths:
-      - "ruby/**"
-      - "shared/**"
-      - .github/workflows/ruby-build.yml
-      - .github/actions/fetch-codeql/action.yml
-      - codeql-workspace.yml
-    branches:
-      - main
-      - "rc/*"
-  pull_request:
-    paths:
-      - "ruby/**"
-      - "shared/**"
-      - .github/workflows/ruby-qltest.yml
-      - .github/actions/fetch-codeql/action.yml
-      - codeql-workspace.yml
-    branches:
-      - main
-      - "rc/*"
-
-env:
-  CARGO_TERM_COLOR: always
-
-defaults:
-  run:
-    working-directory: ruby
-
-permissions:
-  contents: read
-
-jobs:
-  qlupgrade:
-    runs-on: ubuntu-latest
-    steps:
-      - uses: actions/checkout@v4
-      - uses: ./.github/actions/fetch-codeql
-      - name: Check DB upgrade scripts
-        run: |
-          echo >empty.trap
-          codeql dataset import -S ql/lib/upgrades/initial/ruby.dbscheme testdb empty.trap
-          codeql dataset upgrade testdb --additional-packs ql/lib
-          diff -q testdb/ruby.dbscheme ql/lib/ruby.dbscheme
-      - name: Check DB downgrade scripts
-        run: |
-          echo >empty.trap
-          rm -rf testdb; codeql dataset import -S ql/lib/ruby.dbscheme testdb empty.trap
-          codeql resolve upgrades --format=lines --allow-downgrades --additional-packs downgrades \
-           --dbscheme=ql/lib/ruby.dbscheme --target-dbscheme=downgrades/initial/ruby.dbscheme |
-           xargs codeql execute upgrades testdb
-          diff -q testdb/ruby.dbscheme downgrades/initial/ruby.dbscheme
-  qltest:
-    if: github.repository_owner == 'github'
-    runs-on: ubuntu-latest-xl
-    strategy:
-      fail-fast: false
-    steps:
-      - uses: actions/checkout@v4
-      - uses: ./.github/actions/fetch-codeql
-      - uses: ./ruby/actions/create-extractor-pack
-      - name: Cache compilation cache
-        id: query-cache
-        uses: ./.github/actions/cache-query-compilation
-        with:
-          key: ruby-qltest
-      - name: Run QL tests
-        run: |
-          codeql test run --threads=0 --ram 50000 --search-path "${{ github.workspace }}" --check-databases --check-undefined-labels --check-unused-labels --check-repeated-labels --check-redefined-labels --check-use-before-definition --consistency-queries ql/consistency-queries ql/test --compilation-cache "${{ steps.query-cache.outputs.cache-dir }}"
-        env:
-          GITHUB_TOKEN: ${{ github.token }}

.github/workflows/rust-analysis.yml

@@ -35,7 +35,7 @@ jobs:
 
     steps:
     - name: Checkout repository
-      uses: actions/checkout@v4
+      uses: actions/checkout@v5
 
     - name: Query latest nightly CodeQL bundle
       shell: bash

.github/workflows/rust.yml

@@ -30,7 +30,7 @@ jobs:
         working-directory: rust/ast-generator
     steps:
       - name: Checkout
-        uses: actions/checkout@v4
+        uses: actions/checkout@v5
       - name: Inject sources
         shell: bash
         run: |
@@ -53,7 +53,7 @@ jobs:
         working-directory: rust/extractor
     steps:
       - name: Checkout
-        uses: actions/checkout@v4
+        uses: actions/checkout@v5
       - name: Format
         shell: bash
         run: |
@@ -69,7 +69,7 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - name: Checkout
-        uses: actions/checkout@v4
+        uses: actions/checkout@v5
       - name: Install CodeQL
         uses: ./.github/actions/fetch-codeql
       - name: Code generation

.github/workflows/swift.yml

@@ -32,11 +32,11 @@ jobs:
     if: github.repository_owner == 'github'
     strategy:
       matrix:
-        runner: [ubuntu-latest, macos-13-xlarge]
+        runner: [ubuntu-latest, macos-15-xlarge]
       fail-fast: false
     runs-on: ${{ matrix.runner }}
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
       - name: Setup (Linux)
         if: runner.os == 'Linux'
         run: |
@@ -53,7 +53,7 @@ jobs:
   clang-format:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
       - uses: pre-commit/action@646c83fcd040023954eafda54b4db0192ce70507
         name: Check that python code is properly formatted
         with:
@@ -61,7 +61,7 @@ jobs:
   codegen:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
       - uses: ./.github/actions/fetch-codeql
       - uses: pre-commit/action@646c83fcd040023954eafda54b4db0192ce70507
         name: Check that QL generated code was checked in
@@ -77,6 +77,6 @@ jobs:
   check-no-override:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
       - name: Check that no override is present in load.bzl
         run: bazel test ... --test_tag_filters=override --test_output=errors

.github/workflows/sync-files.yml

@@ -17,7 +17,7 @@ jobs:
   sync:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
       - name: Check synchronized files
         run: python config/sync-files.py
       - name: Check dbscheme fragments

.github/workflows/tree-sitter-extractor-test.yml

@@ -30,7 +30,7 @@ jobs:
   test:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
       - name: Check formatting
         run: cargo fmt -- --check
       - name: Run tests
@@ -38,12 +38,12 @@ jobs:
   fmt:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
       - name: Check formatting
         run: cargo fmt --check
   clippy:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
       - name: Run clippy
         run: cargo clippy -- --no-deps -D warnings -A clippy::new_without_default -A clippy::too_many_arguments

.github/workflows/validate-change-notes.yml

@@ -23,7 +23,7 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - name: Checkout repository
-        uses: actions/checkout@v4
+        uses: actions/checkout@v5
 
       - name: Setup CodeQL
         uses: ./.github/actions/fetch-codeql
@@ -31,4 +31,4 @@ jobs:
       - name: Fail if there are any errors with existing change notes
 
         run: |
-          codeql pack release --groups cpp,csharp,java,javascript,python,ruby,-examples,-test,-experimental
+          codeql pack release --groups actions,cpp,csharp,go,java,javascript,python,ruby,shared,swift -examples,-test,-experimental

.github/workflows/zipmerge-test.yml

@@ -18,6 +18,6 @@ jobs:
     runs-on: ubuntu-latest
 
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
       - run: |
           bazel test //misc/bazel/internal/zipmerge:test --test_output=all

.gitignore

@@ -62,6 +62,7 @@ node_modules/
 
 # Temporary folders for working with generated models
 .model-temp
+/mad-generation-build
 
 # bazel-built in-tree extractor packs
 /*/extractor-pack
@@ -71,3 +72,10 @@ node_modules/
 
 # cargo build directory
 /target
+
+# some upgrade/downgrade checks create these files
+**/upgrades/*/*.dbscheme.stats
+**/downgrades/*/*.dbscheme.stats
+
+# Mergetool files
+*.orig

.pre-commit-config.yaml

@@ -1,24 +1,26 @@
 # See https://pre-commit.com for more information
 # See https://pre-commit.com/hooks.html for more hooks
+default_language_version:
+  python: python3.12
 repos:
   - repo: https://github.com/pre-commit/pre-commit-hooks
     rev: v3.2.0
     hooks:
       - id: trailing-whitespace
-        exclude: /test/.*$(?<!\.qlref)|.*\.patch$|.*\.qll?$
+        exclude: /test([^/]*)/.*$(?<!\.qlref)|.*\.patch$|.*\.qll?$
       - id: end-of-file-fixer
-        exclude: /test/.*$(?<!\.qlref)|.*\.patch$|.*\.qll?$
+        exclude: Cargo.lock$|/test([^/]*)/.*$(?<!\.qlref)|.*\.patch$|.*\.qll?$
 
   - repo: https://github.com/pre-commit/mirrors-clang-format
     rev: v17.0.6
     hooks:
       - id: clang-format
 
-  - repo: https://github.com/pre-commit/mirrors-autopep8
-    rev: v2.0.4
+  - repo: https://github.com/psf/black
+    rev: 25.1.0
     hooks:
-      - id: autopep8
-        files: ^misc/codegen/.*\.py
+      - id: black
+        files: ^(misc/codegen/.*|misc/scripts/models-as-data/.*)\.py$
 
   - repo: local
     hooks:

CODEOWNERS

@@ -1,22 +1,39 @@
+# Catch-all for anything which isn't matched by a line lower down
+* @github/code-scanning-alert-coverage
+
+# CodeQL language libraries
 /actions/ @github/codeql-dynamic
 /cpp/ @github/codeql-c-analysis
 /csharp/ @github/codeql-csharp
-/csharp/autobuilder/Semmle.Autobuild.Cpp @github/codeql-c-extractor
-/csharp/autobuilder/Semmle.Autobuild.Cpp.Tests @github/codeql-c-extractor
+/csharp/autobuilder/Semmle.Autobuild.Cpp @github/codeql-c-extractor @github/code-scanning-language-coverage
+/csharp/autobuilder/Semmle.Autobuild.Cpp.Tests @github/codeql-c-extractor @github/code-scanning-language-coverage
 /go/ @github/codeql-go
+/go/codeql-tools/ @github/codeql-go @github/code-scanning-language-coverage
+/go/downgrades/ @github/codeql-go @github/code-scanning-language-coverage
+/go/extractor/ @github/codeql-go @github/code-scanning-language-coverage
+/go/extractor-smoke-test/ @github/codeql-go @github/code-scanning-language-coverage
+/go/ql/test/extractor-tests/ @github/codeql-go @github/code-scanning-language-coverage
 /java/ @github/codeql-java
 /javascript/ @github/codeql-javascript
+/javascript/extractor/ @github/codeql-javascript @github/code-scanning-language-coverage
 /python/ @github/codeql-python
+/python/extractor/ @github/codeql-python @github/code-scanning-language-coverage
+/ql/ @github/codeql-ql-for-ql-reviewers
 /ruby/ @github/codeql-ruby
+/ruby/extractor/ @github/codeql-ruby @github/code-scanning-language-coverage
 /rust/ @github/codeql-rust
+/rust/extractor/ @github/codeql-rust @github/code-scanning-language-coverage
+/shared/ @github/codeql-shared-libraries-reviewers
 /swift/ @github/codeql-swift
+/swift/extractor/ @github/codeql-swift @github/code-scanning-language-coverage
 /misc/codegen/ @github/codeql-swift
-/java/kotlin-extractor/ @github/codeql-kotlin
+/java/kotlin-extractor/ @github/codeql-kotlin @github/code-scanning-language-coverage
 /java/ql/test-kotlin1/ @github/codeql-kotlin
 /java/ql/test-kotlin2/ @github/codeql-kotlin
 
 # Experimental CodeQL cryptography
-**/experimental/quantum/ @github/ps-codeql
+**/experimental/**/quantum/ @github/ps-codeql
+/shared/quantum/ @github/ps-codeql
 
 # CodeQL tools and associated docs
 /docs/codeql/codeql-cli/ @github/codeql-cli-reviewers
@@ -24,9 +41,6 @@
 /docs/codeql/ql-language-reference/ @github/codeql-frontend-reviewers
 /docs/query-*-style-guide.md @github/codeql-analysis-reviewers
 
-# QL for QL reviewers
-/ql/ @github/codeql-ql-for-ql-reviewers
-
 # Bazel (excluding BUILD.bazel files)
 MODULE.bazel @github/codeql-ci-reviewers
 .bazelversion @github/codeql-ci-reviewers

Cargo.toml

@@ -10,8 +10,3 @@ members = [
     "rust/ast-generator",
     "rust/autobuild",
 ]
-
-[patch.crates-io]
-# patch for build script bug preventing bazel build
-# see https://github.com/rust-lang/rustc_apfloat/pull/17
-rustc_apfloat = { git = "https://github.com/redsun82/rustc_apfloat.git", rev = "32968f16ef1b082243f9bf43a3fbd65c381b3e27" }

MODULE.bazel

@@ -14,22 +14,24 @@ local_path_override(
 
 # see https://registry.bazel.build/ for a list of available packages
 
-bazel_dep(name = "platforms", version = "0.0.11")
-bazel_dep(name = "rules_go", version = "0.50.1")
-bazel_dep(name = "rules_pkg", version = "1.0.1")
-bazel_dep(name = "rules_nodejs", version = "6.2.0-codeql.1")
-bazel_dep(name = "rules_python", version = "0.40.0")
-bazel_dep(name = "rules_shell", version = "0.3.0")
-bazel_dep(name = "bazel_skylib", version = "1.7.1")
-bazel_dep(name = "abseil-cpp", version = "20240116.1", repo_name = "absl")
+bazel_dep(name = "platforms", version = "1.0.0")
+bazel_dep(name = "rules_cc", version = "0.2.17")
+bazel_dep(name = "rules_go", version = "0.60.0")
+bazel_dep(name = "rules_java", version = "9.6.1")
+bazel_dep(name = "rules_pkg", version = "1.2.0")
+bazel_dep(name = "rules_nodejs", version = "6.7.3")
+bazel_dep(name = "rules_python", version = "1.9.0")
+bazel_dep(name = "rules_shell", version = "0.7.1")
+bazel_dep(name = "bazel_skylib", version = "1.9.0")
+bazel_dep(name = "abseil-cpp", version = "20260107.1", repo_name = "absl")
 bazel_dep(name = "nlohmann_json", version = "3.11.3", repo_name = "json")
-bazel_dep(name = "fmt", version = "10.0.0")
-bazel_dep(name = "rules_kotlin", version = "2.0.0-codeql.1")
-bazel_dep(name = "gazelle", version = "0.40.0")
-bazel_dep(name = "rules_dotnet", version = "0.17.4")
-bazel_dep(name = "googletest", version = "1.14.0.bcr.1")
-bazel_dep(name = "rules_rust", version = "0.58.0")
-bazel_dep(name = "zstd", version = "1.5.5.bcr.1")
+bazel_dep(name = "fmt", version = "12.1.0-codeql.1")
+bazel_dep(name = "rules_kotlin", version = "2.2.2-codeql.1")
+bazel_dep(name = "gazelle", version = "0.50.0")
+bazel_dep(name = "rules_dotnet", version = "0.21.5-codeql.1")
+bazel_dep(name = "googletest", version = "1.17.0.bcr.2")
+bazel_dep(name = "rules_rust", version = "0.69.0")
+bazel_dep(name = "zstd", version = "1.5.7.bcr.1")
 
 bazel_dep(name = "buildifier_prebuilt", version = "6.4.0", dev_dependency = True)
 
@@ -37,7 +39,11 @@ bazel_dep(name = "buildifier_prebuilt", version = "6.4.0", dev_dependency = True
 # the versions there are canonical, the versions here are used for CI in github/codeql, as well as for the vendoring of dependencies.
 RUST_EDITION = "2024"
 
-RUST_VERSION = "1.85.0"
+# run buildutils-internal/scripts/fill-rust-sha256s.py when updating (internal repo)
+# a nightly toolchain is required to enable experimental_use_cc_common_link, which we require internally
+# we prefer to run the same version as internally, even if experimental_use_cc_common_link is not really
+# required in this repo
+RUST_VERSION = "nightly/2026-01-22"
 
 rust = use_extension("@rules_rust//rust:extensions.bzl", "rust")
 rust.toolchain(
@@ -47,6 +53,29 @@ rust.toolchain(
         "x86_64-apple-darwin",
         "aarch64-apple-darwin",
     ],
+    # generated by buildutils-internal/scripts/fill-rust-sha256s.py (internal repo)
+    sha256s = {
+        "2026-01-22/rustc-nightly-x86_64-unknown-linux-gnu.tar.xz": "88db619323cc1321630d124efa51ed02fabc5e020f08cfa0eda2c0ac1afbe69a",
+        "2026-01-22/rustc-nightly-x86_64-apple-darwin.tar.xz": "08484da3fa38db56f93629aeabdc0ae9ff8ed9704c0792d35259cbc849b3f54c",
+        "2026-01-22/rustc-nightly-aarch64-apple-darwin.tar.xz": "a39c0b21b7058e364ea1bd43144e42e4bf1efade036b2e82455f2afce194ee81",
+        "2026-01-22/rustc-nightly-x86_64-pc-windows-msvc.tar.xz": "d00248ee9850dbb6932b2578e32ff74fc7c429854c1aa071066ca31b65385a3b",
+        "2026-01-22/clippy-nightly-x86_64-unknown-linux-gnu.tar.xz": "70656a0ce994ffff16d5a35a7b170a0acd41e9bb54a589c96ed45bf97b094a4d",
+        "2026-01-22/clippy-nightly-x86_64-apple-darwin.tar.xz": "fe242519fa961522734733009705aec3c2d9a20cc57291f2aa614e5e6262c88f",
+        "2026-01-22/clippy-nightly-aarch64-apple-darwin.tar.xz": "38bb226363ec97c9722edf966cd58774a683e19fd2ff2a6030094445d51e06f9",
+        "2026-01-22/clippy-nightly-x86_64-pc-windows-msvc.tar.xz": "6da9b4470beea67abfebf046f141eee0d2a8db7c7a9e4e2294478734fd477228",
+        "2026-01-22/cargo-nightly-x86_64-unknown-linux-gnu.tar.xz": "99004e9d10c43a01499642f53bb3184d41137a95d65bfb217098840a9e79e892",
+        "2026-01-22/cargo-nightly-x86_64-apple-darwin.tar.xz": "6e021394cf8d8400ac6cfdfcef24e4d74f988e91eb8028b36de3a64ce3502990",
+        "2026-01-22/cargo-nightly-aarch64-apple-darwin.tar.xz": "4b2494cb69ab64132cddbc411a38ea9f1105e54d6f986e43168d54f79510c673",
+        "2026-01-22/cargo-nightly-x86_64-pc-windows-msvc.tar.xz": "c36613cf57407212d10d37b76e49a60ff42336e953cdff9e177283f530a83fc1",
+        "2026-01-22/llvm-tools-nightly-x86_64-unknown-linux-gnu.tar.xz": "0b123c5027dbd833aae6845ffe9bd07d309bf798746a7176aadaea68fbcbd05d",
+        "2026-01-22/llvm-tools-nightly-x86_64-apple-darwin.tar.xz": "a47864491ad5619158c950ab7570fb6e487d5117338585c27334d45824b406d8",
+        "2026-01-22/llvm-tools-nightly-aarch64-apple-darwin.tar.xz": "db9bc826d6e2e7e914505d50157682e516ceb90357e83d77abddc32c2d962f41",
+        "2026-01-22/llvm-tools-nightly-x86_64-pc-windows-msvc.tar.xz": "ffaa406932b2fe62e01dad61cf4ed34860a5d2a6f9306ca340d79e630d930039",
+        "2026-01-22/rust-std-nightly-x86_64-unknown-linux-gnu.tar.xz": "e9c0d5e06e18a4b509391b3088f29293e310cdc8ccc865be8fa3f09733326925",
+        "2026-01-22/rust-std-nightly-x86_64-apple-darwin.tar.xz": "25d75995cee679a4828ca9fe48c5a31a67c3b0846018440ef912e5a6208f53f6",
+        "2026-01-22/rust-std-nightly-aarch64-apple-darwin.tar.xz": "e4132bf3f2eed4684c86756a02315bcf481c23e675e3e25630fc604c9cb4594c",
+        "2026-01-22/rust-std-nightly-x86_64-pc-windows-msvc.tar.xz": "961bb535ef95ae8a5fa4e224cb94aff190f155c45a9bcf7a53e184b024aa41b1",
+    },
     versions = [RUST_VERSION],
 )
 use_repo(rust, "rust_toolchains")
@@ -62,8 +91,8 @@ use_repo(
     "vendor_py__cc-1.2.14",
     "vendor_py__clap-4.5.30",
     "vendor_py__regex-1.11.1",
-    "vendor_py__tree-sitter-0.20.4",
-    "vendor_py__tree-sitter-graph-0.7.0",
+    "vendor_py__tree-sitter-0.24.7",
+    "vendor_py__tree-sitter-graph-0.12.0",
 )
 
 # deps for ruby+rust
@@ -71,59 +100,60 @@ use_repo(
 tree_sitter_extractors_deps = use_extension("//misc/bazel/3rdparty:tree_sitter_extractors_extension.bzl", "r")
 use_repo(
     tree_sitter_extractors_deps,
-    "vendor_ts__anyhow-1.0.97",
+    "vendor_ts__anyhow-1.0.100",
     "vendor_ts__argfile-0.2.1",
-    "vendor_ts__chalk-ir-0.100.0",
-    "vendor_ts__chrono-0.4.40",
-    "vendor_ts__clap-4.5.35",
+    "vendor_ts__chalk-ir-0.104.0",
+    "vendor_ts__chrono-0.4.42",
+    "vendor_ts__clap-4.5.48",
     "vendor_ts__dunce-1.0.5",
     "vendor_ts__either-1.15.0",
     "vendor_ts__encoding-0.2.33",
     "vendor_ts__figment-0.10.19",
-    "vendor_ts__flate2-1.1.0",
-    "vendor_ts__glob-0.3.2",
-    "vendor_ts__globset-0.4.15",
+    "vendor_ts__flate2-1.1.2",
+    "vendor_ts__glob-0.3.3",
+    "vendor_ts__globset-0.4.16",
     "vendor_ts__itertools-0.14.0",
     "vendor_ts__lazy_static-1.5.0",
     "vendor_ts__mustache-0.9.0",
     "vendor_ts__num-traits-0.2.19",
-    "vendor_ts__num_cpus-1.16.0",
-    "vendor_ts__proc-macro2-1.0.94",
-    "vendor_ts__quote-1.0.40",
-    "vendor_ts__ra_ap_base_db-0.0.273",
-    "vendor_ts__ra_ap_cfg-0.0.273",
-    "vendor_ts__ra_ap_hir-0.0.273",
-    "vendor_ts__ra_ap_hir_def-0.0.273",
-    "vendor_ts__ra_ap_hir_expand-0.0.273",
-    "vendor_ts__ra_ap_hir_ty-0.0.273",
-    "vendor_ts__ra_ap_ide_db-0.0.273",
-    "vendor_ts__ra_ap_intern-0.0.273",
-    "vendor_ts__ra_ap_load-cargo-0.0.273",
-    "vendor_ts__ra_ap_parser-0.0.273",
-    "vendor_ts__ra_ap_paths-0.0.273",
-    "vendor_ts__ra_ap_project_model-0.0.273",
-    "vendor_ts__ra_ap_span-0.0.273",
-    "vendor_ts__ra_ap_stdx-0.0.273",
-    "vendor_ts__ra_ap_syntax-0.0.273",
-    "vendor_ts__ra_ap_vfs-0.0.273",
-    "vendor_ts__rand-0.9.0",
-    "vendor_ts__rayon-1.10.0",
-    "vendor_ts__regex-1.11.1",
-    "vendor_ts__serde-1.0.219",
-    "vendor_ts__serde_json-1.0.140",
-    "vendor_ts__serde_with-3.12.0",
-    "vendor_ts__syn-2.0.100",
-    "vendor_ts__toml-0.8.20",
+    "vendor_ts__num_cpus-1.17.0",
+    "vendor_ts__proc-macro2-1.0.101",
+    "vendor_ts__quote-1.0.41",
+    "vendor_ts__ra_ap_base_db-0.0.301",
+    "vendor_ts__ra_ap_cfg-0.0.301",
+    "vendor_ts__ra_ap_hir-0.0.301",
+    "vendor_ts__ra_ap_hir_def-0.0.301",
+    "vendor_ts__ra_ap_hir_expand-0.0.301",
+    "vendor_ts__ra_ap_hir_ty-0.0.301",
+    "vendor_ts__ra_ap_ide_db-0.0.301",
+    "vendor_ts__ra_ap_intern-0.0.301",
+    "vendor_ts__ra_ap_load-cargo-0.0.301",
+    "vendor_ts__ra_ap_parser-0.0.301",
+    "vendor_ts__ra_ap_paths-0.0.301",
+    "vendor_ts__ra_ap_project_model-0.0.301",
+    "vendor_ts__ra_ap_span-0.0.301",
+    "vendor_ts__ra_ap_stdx-0.0.301",
+    "vendor_ts__ra_ap_syntax-0.0.301",
+    "vendor_ts__ra_ap_vfs-0.0.301",
+    "vendor_ts__rand-0.9.2",
+    "vendor_ts__rayon-1.11.0",
+    "vendor_ts__regex-1.11.3",
+    "vendor_ts__serde-1.0.228",
+    "vendor_ts__serde_json-1.0.145",
+    "vendor_ts__serde_with-3.14.1",
+    "vendor_ts__syn-2.0.106",
+    "vendor_ts__toml-0.9.7",
     "vendor_ts__tracing-0.1.41",
     "vendor_ts__tracing-flame-0.2.0",
-    "vendor_ts__tracing-subscriber-0.3.19",
-    "vendor_ts__tree-sitter-0.24.6",
-    "vendor_ts__tree-sitter-embedded-template-0.23.2",
+    "vendor_ts__tracing-subscriber-0.3.20",
+    "vendor_ts__tree-sitter-0.25.9",
+    "vendor_ts__tree-sitter-embedded-template-0.25.0",
     "vendor_ts__tree-sitter-json-0.24.8",
     "vendor_ts__tree-sitter-ql-0.23.1",
     "vendor_ts__tree-sitter-ruby-0.23.1",
     "vendor_ts__triomphe-0.1.14",
     "vendor_ts__ungrammar-1.16.1",
+    "vendor_ts__zstd-0.13.3",
 )
 
 http_archive = use_repo_rule("@bazel_tools//tools/build_defs/repo:http.bzl", "http_archive")
@@ -144,7 +174,7 @@ http_archive(
 )
 
 dotnet = use_extension("@rules_dotnet//dotnet:extensions.bzl", "dotnet")
-dotnet.toolchain(dotnet_version = "9.0.100")
+dotnet.toolchain(dotnet_version = "10.0.100")
 use_repo(dotnet, "dotnet_toolchains")
 
 register_toolchains("@dotnet_toolchains//:all")
@@ -160,6 +190,15 @@ pip.parse(
 )
 use_repo(pip, "codegen_deps")
 
+python = use_extension("@rules_python//python/extensions:python.bzl", "python")
+python.toolchain(
+    is_default = True,
+    python_version = "3.12",
+)
+use_repo(python, "python_3_12", "python_versions")
+
+register_toolchains("@python_versions//3.12:all")
+
 swift_deps = use_extension("//swift/third_party:load.bzl", "swift_deps")
 
 # following list can be kept in sync with `bazel mod tidy`
@@ -193,14 +232,6 @@ use_repo(
     kotlin_extractor_deps,
     "codeql_kotlin_defaults",
     "codeql_kotlin_embeddable",
-    "kotlin-compiler-1.5.0",
-    "kotlin-compiler-1.5.10",
-    "kotlin-compiler-1.5.20",
-    "kotlin-compiler-1.5.30",
-    "kotlin-compiler-1.6.0",
-    "kotlin-compiler-1.6.20",
-    "kotlin-compiler-1.7.0",
-    "kotlin-compiler-1.7.20",
     "kotlin-compiler-1.8.0",
     "kotlin-compiler-1.9.0-Beta",
     "kotlin-compiler-1.9.20-Beta",
@@ -208,14 +239,10 @@ use_repo(
     "kotlin-compiler-2.0.20-Beta2",
     "kotlin-compiler-2.1.0-Beta1",
     "kotlin-compiler-2.1.20-Beta1",
-    "kotlin-compiler-embeddable-1.5.0",
-    "kotlin-compiler-embeddable-1.5.10",
-    "kotlin-compiler-embeddable-1.5.20",
-    "kotlin-compiler-embeddable-1.5.30",
-    "kotlin-compiler-embeddable-1.6.0",
-    "kotlin-compiler-embeddable-1.6.20",
-    "kotlin-compiler-embeddable-1.7.0",
-    "kotlin-compiler-embeddable-1.7.20",
+    "kotlin-compiler-2.2.0-Beta1",
+    "kotlin-compiler-2.2.20-Beta2",
+    "kotlin-compiler-2.3.0",
+    "kotlin-compiler-2.3.20",
     "kotlin-compiler-embeddable-1.8.0",
     "kotlin-compiler-embeddable-1.9.0-Beta",
     "kotlin-compiler-embeddable-1.9.20-Beta",
@@ -223,14 +250,10 @@ use_repo(
     "kotlin-compiler-embeddable-2.0.20-Beta2",
     "kotlin-compiler-embeddable-2.1.0-Beta1",
     "kotlin-compiler-embeddable-2.1.20-Beta1",
-    "kotlin-stdlib-1.5.0",
-    "kotlin-stdlib-1.5.10",
-    "kotlin-stdlib-1.5.20",
-    "kotlin-stdlib-1.5.30",
-    "kotlin-stdlib-1.6.0",
-    "kotlin-stdlib-1.6.20",
-    "kotlin-stdlib-1.7.0",
-    "kotlin-stdlib-1.7.20",
+    "kotlin-compiler-embeddable-2.2.0-Beta1",
+    "kotlin-compiler-embeddable-2.2.20-Beta2",
+    "kotlin-compiler-embeddable-2.3.0",
+    "kotlin-compiler-embeddable-2.3.20",
     "kotlin-stdlib-1.8.0",
     "kotlin-stdlib-1.9.0-Beta",
     "kotlin-stdlib-1.9.20-Beta",
@@ -238,33 +261,29 @@ use_repo(
     "kotlin-stdlib-2.0.20-Beta2",
     "kotlin-stdlib-2.1.0-Beta1",
     "kotlin-stdlib-2.1.20-Beta1",
+    "kotlin-stdlib-2.2.0-Beta1",
+    "kotlin-stdlib-2.2.20-Beta2",
+    "kotlin-stdlib-2.3.0",
+    "kotlin-stdlib-2.3.20",
 )
 
 go_sdk = use_extension("@rules_go//go:extensions.bzl", "go_sdk")
-go_sdk.download(version = "1.24.0")
+go_sdk.download(version = "1.26.0")
 
 go_deps = use_extension("@gazelle//:extensions.bzl", "go_deps")
 go_deps.from_file(go_mod = "//go/extractor:go.mod")
-use_repo(go_deps, "org_golang_x_mod", "org_golang_x_tools")
+use_repo(go_deps, "com_github_stretchr_testify", "org_golang_x_mod", "org_golang_x_tools")
 
-lfs_files = use_repo_rule("//misc/bazel:lfs.bzl", "lfs_files")
+ripunzip_archive = use_repo_rule("//misc/ripunzip:ripunzip.bzl", "ripunzip_archive")
 
-lfs_files(
-    name = "ripunzip-linux",
-    srcs = ["//misc/ripunzip:ripunzip-linux"],
-    executable = True,
-)
-
-lfs_files(
-    name = "ripunzip-windows",
-    srcs = ["//misc/ripunzip:ripunzip-windows.exe"],
-    executable = True,
-)
-
-lfs_files(
-    name = "ripunzip-macos",
-    srcs = ["//misc/ripunzip:ripunzip-macos"],
-    executable = True,
+# go to https://github.com/GoogleChrome/ripunzip/releases to find latest version and corresponding sha256s
+ripunzip_archive(
+    name = "ripunzip",
+    sha256_linux = "71482d7a7e4ea9176d5596161c49250c34b136b157c45f632b1111323fbfc0de",
+    sha256_macos_arm = "604194ab13f0aba3972995d995f11002b8fc285c8170401fcd46655065df20c9",
+    sha256_macos_intel = "65367b94fd579d93d46f2d2595cc4c9a60cfcf497e3c824f9d1a7b80fa8bd38a",
+    sha256_windows = "ac3874075def2b9e5074a3b5945005ab082cc6e689e1de658da8965bc23e643e",
+    version = "2.0.4",
 )
 
 register_toolchains(

actions/extractor/codeql-extractor.yml

@@ -1,14 +1,17 @@
 name: "actions"
-aliases: []
 display_name: "GitHub Actions"
 version: 0.0.1
 column_kind: "utf16"
 unicode_newlines: true
 build_modes:
   - none
-file_coverage_languages: []
+default_queries:
+  - codeql/actions-queries
+# Actions workflows are not reported separately by the GitHub API, so we can't
+# associate them with a specific language.
 github_api_languages: []
-scc_languages: []
+scc_languages:
+  - YAML
 file_types:
   - name: workflow
     display_name: GitHub Actions workflow files

actions/extractor/tools/baseline-config.json

@@ -0,0 +1,10 @@
+{
+    "paths": [
+        ".github/workflows/*.yml",
+        ".github/workflows/*.yaml",
+        ".github/reusable_workflows/**/*.yml",
+        ".github/reusable_workflows/**/*.yaml",
+        "**/action.yml",
+        "**/action.yaml"
+    ]
+}

actions/extractor/tools/configure-baseline.cmd

@@ -0,0 +1,2 @@
+@echo off
+type "%CODEQL_EXTRACTOR_ACTIONS_ROOT%\tools\baseline-config.json"

actions/extractor/tools/configure-baseline.sh

@@ -0,0 +1,3 @@
+#!/bin/sh
+
+cat "$CODEQL_EXTRACTOR_ACTIONS_ROOT/tools/baseline-config.json"

actions/ql/examples/codeql-pack.lock.yml

@@ -0,0 +1,4 @@
+---
+lockVersion: 1.0.0
+dependencies: {}
+compiled: false

actions/ql/examples/qlpack.yml

@@ -0,0 +1,7 @@
+name: codeql/actions-examples
+groups:
+  - actions
+  - examples
+dependencies:
+  codeql/actions-all: ${workspace}
+warnOnImplicitThis: true

actions/ql/examples/snippets/uses_pinned_sha.ql

@@ -0,0 +1,12 @@
+/**
+ * @name Uses step with pinned SHA
+ * @description Finds 'uses' steps where the version is a pinned SHA.
+ * @id actions/examples/uses-pinned-sha
+ * @tags example
+ */
+
+import actions
+
+from UsesStep uses
+where uses.getVersion().regexpMatch("^[A-Fa-f0-9]{40}$")
+select uses, "This 'uses' step has a pinned SHA version."

actions/ql/integration-tests/query-suite/actions-code-quality-extended.qls.expected

@@ -0,0 +1 @@
+

actions/ql/integration-tests/query-suite/actions-code-quality.qls.expected

@@ -0,0 +1 @@
+

actions/ql/integration-tests/query-suite/actions-code-scanning.qls.expected

@@ -0,0 +1,18 @@
+ql/actions/ql/src/Diagnostics/SuccessfullyExtractedFiles.ql
+ql/actions/ql/src/Security/CWE-077/EnvPathInjectionCritical.ql
+ql/actions/ql/src/Security/CWE-077/EnvVarInjectionCritical.ql
+ql/actions/ql/src/Security/CWE-094/CodeInjectionCritical.ql
+ql/actions/ql/src/Security/CWE-1395/UseOfKnownVulnerableAction.ql
+ql/actions/ql/src/Security/CWE-275/MissingActionsPermissions.ql
+ql/actions/ql/src/Security/CWE-285/ImproperAccessControl.ql
+ql/actions/ql/src/Security/CWE-312/ExcessiveSecretsExposure.ql
+ql/actions/ql/src/Security/CWE-312/SecretsInArtifacts.ql
+ql/actions/ql/src/Security/CWE-312/UnmaskedSecretExposure.ql
+ql/actions/ql/src/Security/CWE-349/CachePoisoningViaCodeInjection.ql
+ql/actions/ql/src/Security/CWE-349/CachePoisoningViaDirectCache.ql
+ql/actions/ql/src/Security/CWE-349/CachePoisoningViaPoisonableStep.ql
+ql/actions/ql/src/Security/CWE-367/UntrustedCheckoutTOCTOUCritical.ql
+ql/actions/ql/src/Security/CWE-367/UntrustedCheckoutTOCTOUHigh.ql
+ql/actions/ql/src/Security/CWE-829/ArtifactPoisoningCritical.ql
+ql/actions/ql/src/Security/CWE-829/UntrustedCheckoutCritical.ql
+ql/actions/ql/src/Security/CWE-829/UntrustedCheckoutHigh.ql

actions/ql/integration-tests/query-suite/actions-security-and-quality.qls.expected

@@ -0,0 +1,28 @@
+ql/actions/ql/src/Debug/SyntaxError.ql
+ql/actions/ql/src/Diagnostics/SuccessfullyExtractedFiles.ql
+ql/actions/ql/src/Security/CWE-077/EnvPathInjectionCritical.ql
+ql/actions/ql/src/Security/CWE-077/EnvPathInjectionMedium.ql
+ql/actions/ql/src/Security/CWE-077/EnvVarInjectionCritical.ql
+ql/actions/ql/src/Security/CWE-077/EnvVarInjectionMedium.ql
+ql/actions/ql/src/Security/CWE-094/CodeInjectionCritical.ql
+ql/actions/ql/src/Security/CWE-094/CodeInjectionMedium.ql
+ql/actions/ql/src/Security/CWE-1395/UseOfKnownVulnerableAction.ql
+ql/actions/ql/src/Security/CWE-275/MissingActionsPermissions.ql
+ql/actions/ql/src/Security/CWE-285/ImproperAccessControl.ql
+ql/actions/ql/src/Security/CWE-312/ExcessiveSecretsExposure.ql
+ql/actions/ql/src/Security/CWE-312/SecretsInArtifacts.ql
+ql/actions/ql/src/Security/CWE-312/UnmaskedSecretExposure.ql
+ql/actions/ql/src/Security/CWE-349/CachePoisoningViaCodeInjection.ql
+ql/actions/ql/src/Security/CWE-349/CachePoisoningViaDirectCache.ql
+ql/actions/ql/src/Security/CWE-349/CachePoisoningViaPoisonableStep.ql
+ql/actions/ql/src/Security/CWE-367/UntrustedCheckoutTOCTOUCritical.ql
+ql/actions/ql/src/Security/CWE-367/UntrustedCheckoutTOCTOUHigh.ql
+ql/actions/ql/src/Security/CWE-571/ExpressionIsAlwaysTrueCritical.ql
+ql/actions/ql/src/Security/CWE-571/ExpressionIsAlwaysTrueHigh.ql
+ql/actions/ql/src/Security/CWE-829/ArtifactPoisoningCritical.ql
+ql/actions/ql/src/Security/CWE-829/ArtifactPoisoningMedium.ql
+ql/actions/ql/src/Security/CWE-829/UnpinnedActionsTag.ql
+ql/actions/ql/src/Security/CWE-829/UntrustedCheckoutCritical.ql
+ql/actions/ql/src/Security/CWE-829/UntrustedCheckoutHigh.ql
+ql/actions/ql/src/Security/CWE-829/UntrustedCheckoutMedium.ql
+ql/actions/ql/src/Violations Of Best Practice/CodeQL/UnnecessaryUseOfAdvancedConfig.ql

actions/ql/integration-tests/query-suite/actions-security-extended.qls.expected

@@ -0,0 +1,24 @@
+ql/actions/ql/src/Diagnostics/SuccessfullyExtractedFiles.ql
+ql/actions/ql/src/Security/CWE-077/EnvPathInjectionCritical.ql
+ql/actions/ql/src/Security/CWE-077/EnvPathInjectionMedium.ql
+ql/actions/ql/src/Security/CWE-077/EnvVarInjectionCritical.ql
+ql/actions/ql/src/Security/CWE-077/EnvVarInjectionMedium.ql
+ql/actions/ql/src/Security/CWE-094/CodeInjectionCritical.ql
+ql/actions/ql/src/Security/CWE-094/CodeInjectionMedium.ql
+ql/actions/ql/src/Security/CWE-1395/UseOfKnownVulnerableAction.ql
+ql/actions/ql/src/Security/CWE-275/MissingActionsPermissions.ql
+ql/actions/ql/src/Security/CWE-285/ImproperAccessControl.ql
+ql/actions/ql/src/Security/CWE-312/ExcessiveSecretsExposure.ql
+ql/actions/ql/src/Security/CWE-312/SecretsInArtifacts.ql
+ql/actions/ql/src/Security/CWE-312/UnmaskedSecretExposure.ql
+ql/actions/ql/src/Security/CWE-349/CachePoisoningViaCodeInjection.ql
+ql/actions/ql/src/Security/CWE-349/CachePoisoningViaDirectCache.ql
+ql/actions/ql/src/Security/CWE-349/CachePoisoningViaPoisonableStep.ql
+ql/actions/ql/src/Security/CWE-367/UntrustedCheckoutTOCTOUCritical.ql
+ql/actions/ql/src/Security/CWE-367/UntrustedCheckoutTOCTOUHigh.ql
+ql/actions/ql/src/Security/CWE-829/ArtifactPoisoningCritical.ql
+ql/actions/ql/src/Security/CWE-829/ArtifactPoisoningMedium.ql
+ql/actions/ql/src/Security/CWE-829/UnpinnedActionsTag.ql
+ql/actions/ql/src/Security/CWE-829/UntrustedCheckoutCritical.ql
+ql/actions/ql/src/Security/CWE-829/UntrustedCheckoutHigh.ql
+ql/actions/ql/src/Security/CWE-829/UntrustedCheckoutMedium.ql

actions/ql/integration-tests/query-suite/not_included_in_qls.expected

@@ -0,0 +1,17 @@
+ql/actions/ql/src/Debug/partial.ql
+ql/actions/ql/src/Models/CompositeActionsSinks.ql
+ql/actions/ql/src/Models/CompositeActionsSources.ql
+ql/actions/ql/src/Models/CompositeActionsSummaries.ql
+ql/actions/ql/src/Models/ReusableWorkflowsSinks.ql
+ql/actions/ql/src/Models/ReusableWorkflowsSources.ql
+ql/actions/ql/src/Models/ReusableWorkflowsSummaries.ql
+ql/actions/ql/src/experimental/Security/CWE-074/OutputClobberingHigh.ql
+ql/actions/ql/src/experimental/Security/CWE-078/CommandInjectionCritical.ql
+ql/actions/ql/src/experimental/Security/CWE-078/CommandInjectionMedium.ql
+ql/actions/ql/src/experimental/Security/CWE-088/ArgumentInjectionCritical.ql
+ql/actions/ql/src/experimental/Security/CWE-088/ArgumentInjectionMedium.ql
+ql/actions/ql/src/experimental/Security/CWE-200/SecretExfiltration.ql
+ql/actions/ql/src/experimental/Security/CWE-284/CodeExecutionOnSelfHostedRunner.ql
+ql/actions/ql/src/experimental/Security/CWE-829/ArtifactPoisoningPathTraversal.ql
+ql/actions/ql/src/experimental/Security/CWE-829/UnversionedImmutableAction.ql
+ql/actions/ql/src/experimental/Security/CWE-918/RequestForgery.ql

actions/ql/integration-tests/query-suite/test.py

@@ -0,0 +1,14 @@
+import runs_on
+import pytest
+from query_suites import *
+
+well_known_query_suites = ['actions-code-quality.qls', 'actions-code-quality-extended.qls', 'actions-security-and-quality.qls', 'actions-security-extended.qls', 'actions-code-scanning.qls']
+
+@runs_on.posix
+@pytest.mark.parametrize("query_suite", well_known_query_suites)
+def test(codeql, actions, check_query_suite, query_suite):
+    check_query_suite(query_suite)
+
+@runs_on.posix
+def test_not_included_queries(codeql, actions, check_queries_not_included):
+    check_queries_not_included('actions', well_known_query_suites)

actions/ql/lib/CHANGELOG.md

@@ -1,7 +1,129 @@
-## 0.4.7
+## 0.4.34
+
+### Minor Analysis Improvements
+
+* Removed false positive injection sink models for the `context` input of `docker/build-push-action` and the `allowed-endpoints` input of `step-security/harden-runner`.
+
+## 0.4.33
 
 No user-facing changes.
 
+## 0.4.32
+
+No user-facing changes.
+
+## 0.4.31
+
+No user-facing changes.
+
+## 0.4.30
+
+No user-facing changes.
+
+## 0.4.29
+
+No user-facing changes.
+
+## 0.4.28
+
+No user-facing changes.
+
+## 0.4.27
+
+### Bug Fixes
+
+* Fixed a crash when analysing a `${{ ... }}` expression over around 300 characters in length.
+
+## 0.4.26
+
+### Major Analysis Improvements
+
+* The query `actions/code-injection/medium` has been updated to include results which were incorrectly excluded while filtering out results that are reported by `actions/code-injection/critical`.
+
+## 0.4.25
+
+No user-facing changes.
+
+## 0.4.24
+
+No user-facing changes.
+
+## 0.4.23
+
+No user-facing changes.
+
+## 0.4.22
+
+No user-facing changes.
+
+## 0.4.21
+
+No user-facing changes.
+
+## 0.4.20
+
+No user-facing changes.
+
+## 0.4.19
+
+No user-facing changes.
+
+## 0.4.18
+
+No user-facing changes.
+
+## 0.4.17
+
+No user-facing changes.
+
+## 0.4.16
+
+No user-facing changes.
+
+## 0.4.15
+
+No user-facing changes.
+
+## 0.4.14
+
+No user-facing changes.
+
+## 0.4.13
+
+### Bug Fixes
+
+* The `actions/artifact-poisoning/critical` and `actions/artifact-poisoning/medium` queries now exclude artifacts downloaded to `$[{ runner.temp }}` in addition to `/tmp`.
+
+## 0.4.12
+
+### Minor Analysis Improvements
+
+* Fixed performance issues in the parsing of Bash scripts in workflow files,
+  which led to out-of-disk errors when analysing certain workflow files with
+  complex interpolations of shell commands or quoted strings.
+
+## 0.4.11
+
+No user-facing changes.
+
+## 0.4.10
+
+No user-facing changes.
+
+## 0.4.9
+
+No user-facing changes.
+
+## 0.4.8
+
+No user-facing changes.
+
+## 0.4.7
+
+### New Features
+
+* CodeQL and Copilot Autofix support for GitHub Actions is now Generally Available.
+
 ## 0.4.6
 
 ### Bug Fixes

actions/ql/lib/change-notes/released/0.4.10.md

@@ -0,0 +1,3 @@
+## 0.4.10
+
+No user-facing changes.

actions/ql/lib/change-notes/released/0.4.11.md

@@ -0,0 +1,3 @@
+## 0.4.11
+
+No user-facing changes.

actions/ql/lib/change-notes/released/0.4.12.md

@@ -0,0 +1,7 @@
+## 0.4.12
+
+### Minor Analysis Improvements
+
+* Fixed performance issues in the parsing of Bash scripts in workflow files,
+  which led to out-of-disk errors when analysing certain workflow files with
+  complex interpolations of shell commands or quoted strings.

actions/ql/lib/change-notes/released/0.4.13.md

@@ -0,0 +1,5 @@
+## 0.4.13
+
+### Bug Fixes
+
+* The `actions/artifact-poisoning/critical` and `actions/artifact-poisoning/medium` queries now exclude artifacts downloaded to `$[{ runner.temp }}` in addition to `/tmp`.

actions/ql/lib/change-notes/released/0.4.14.md

@@ -0,0 +1,3 @@
+## 0.4.14
+
+No user-facing changes.

actions/ql/lib/change-notes/released/0.4.15.md

@@ -0,0 +1,3 @@
+## 0.4.15
+
+No user-facing changes.

actions/ql/lib/change-notes/released/0.4.16.md

@@ -0,0 +1,3 @@
+## 0.4.16
+
+No user-facing changes.

actions/ql/lib/change-notes/released/0.4.17.md

@@ -0,0 +1,3 @@
+## 0.4.17
+
+No user-facing changes.

actions/ql/lib/change-notes/released/0.4.18.md

@@ -0,0 +1,3 @@
+## 0.4.18
+
+No user-facing changes.

actions/ql/lib/change-notes/released/0.4.19.md

@@ -0,0 +1,3 @@
+## 0.4.19
+
+No user-facing changes.

actions/ql/lib/change-notes/released/0.4.20.md

@@ -0,0 +1,3 @@
+## 0.4.20
+
+No user-facing changes.

actions/ql/lib/change-notes/released/0.4.21.md

@@ -0,0 +1,3 @@
+## 0.4.21
+
+No user-facing changes.

actions/ql/lib/change-notes/released/0.4.22.md

@@ -0,0 +1,3 @@
+## 0.4.22
+
+No user-facing changes.

actions/ql/lib/change-notes/released/0.4.23.md

@@ -0,0 +1,3 @@
+## 0.4.23
+
+No user-facing changes.

actions/ql/lib/change-notes/released/0.4.24.md

@@ -0,0 +1,3 @@
+## 0.4.24
+
+No user-facing changes.

actions/ql/lib/change-notes/released/0.4.25.md

@@ -0,0 +1,3 @@
+## 0.4.25
+
+No user-facing changes.

actions/ql/lib/change-notes/released/0.4.26.md

@@ -0,0 +1,5 @@
+## 0.4.26
+
+### Major Analysis Improvements
+
+* The query `actions/code-injection/medium` has been updated to include results which were incorrectly excluded while filtering out results that are reported by `actions/code-injection/critical`.

actions/ql/lib/change-notes/released/0.4.27.md

@@ -0,0 +1,5 @@
+## 0.4.27
+
+### Bug Fixes
+
+* Fixed a crash when analysing a `${{ ... }}` expression over around 300 characters in length.

actions/ql/lib/change-notes/released/0.4.28.md

@@ -0,0 +1,3 @@
+## 0.4.28
+
+No user-facing changes.

actions/ql/lib/change-notes/released/0.4.29.md

@@ -0,0 +1,3 @@
+## 0.4.29
+
+No user-facing changes.

actions/ql/lib/change-notes/released/0.4.30.md

@@ -0,0 +1,3 @@
+## 0.4.30
+
+No user-facing changes.

actions/ql/lib/change-notes/released/0.4.31.md

@@ -0,0 +1,3 @@
+## 0.4.31
+
+No user-facing changes.

actions/ql/lib/change-notes/released/0.4.32.md

@@ -0,0 +1,3 @@
+## 0.4.32
+
+No user-facing changes.

actions/ql/lib/change-notes/released/0.4.33.md

@@ -0,0 +1,3 @@
+## 0.4.33
+
+No user-facing changes.

actions/ql/lib/change-notes/released/0.4.34.md

@@ -0,0 +1,5 @@
+## 0.4.34
+
+### Minor Analysis Improvements
+
+* Removed false positive injection sink models for the `context` input of `docker/build-push-action` and the `allowed-endpoints` input of `step-security/harden-runner`.

actions/ql/lib/change-notes/released/0.4.7.md

@@ -1,3 +1,5 @@
 ## 0.4.7
 
-No user-facing changes.
+### New Features
+
+* CodeQL and Copilot Autofix support for GitHub Actions is now Generally Available.

actions/ql/lib/change-notes/released/0.4.8.md

@@ -0,0 +1,3 @@
+## 0.4.8
+
+No user-facing changes.

actions/ql/lib/change-notes/released/0.4.9.md

@@ -0,0 +1,3 @@
+## 0.4.9
+
+No user-facing changes.

actions/ql/lib/codeql-pack.release.yml

@@ -1,2 +1,2 @@
 ---
-lastReleaseVersion: 0.4.7
+lastReleaseVersion: 0.4.34

actions/ql/lib/codeql/Locations.qll

@@ -70,8 +70,8 @@ class Location extends TLocation, TBaseLocation {
 
   /**
    * Holds if this element is at the specified location.
-   * The location spans column `startcolumn` of line `startline` to
-   * column `endcolumn` of line `endline` in file `filepath`.
+   * The location spans column `sc` of line `sl` to
+   * column `ec` of line `el` in file `p`.
    * For more information, see
    * [Providing locations in CodeQL queries](https://codeql.github.com/docs/writing-codeql-queries/providing-locations-in-codeql-queries/).
    */

actions/ql/lib/codeql/actions/Ast.qll

@@ -50,8 +50,8 @@ class Expression extends AstNode instanceof ExpressionImpl {
   string getNormalizedExpression() { result = normalizeExpr(expression) }
 }
 
-/** A common class for `env` in workflow, job or step. */
-abstract class Env extends AstNode instanceof EnvImpl {
+/** An `env` in workflow, job or step. */
+class Env extends AstNode instanceof EnvImpl {
   /** Gets an environment variable value given its name. */
   ScalarValueImpl getEnvVarValue(string name) { result = super.getEnvVarValue(name) }
 
@@ -261,7 +261,7 @@ class If extends AstNode instanceof IfImpl {
 }
 
 /**
- * An Environemnt node representing a deployment environment.
+ * An Environment node representing a deployment environment.
  */
 class Environment extends AstNode instanceof EnvironmentImpl {
   string getName() { result = super.getName() }