Add changelog for 2.17.4

Go: sync ExternalFlow.qll

.bazelrc

@@ -10,16 +10,19 @@ common --override_module=semmle_code=%workspace%/misc/bazel/semmle_code_stub
 
 build --repo_env=CC=clang --repo_env=CXX=clang++
 
-build:linux --cxxopt=-std=c++20
-# we currently cannot built the swift extractor for ARM
-build:macos --cxxopt=-std=c++20 --copt=-arch --copt=x86_64 --linkopt=-arch --linkopt=x86_64
-build:windows --cxxopt=/std:c++20 --cxxopt=/Zc:preprocessor
+# we use transitions that break builds of `...`, so for `test` to work with that we need the following
+test --build_tests_only
 
 # this requires developer mode, but is required to have pack installer functioning
 startup --windows_enable_symlinks
 common --enable_runfiles
 
+# with the above, we can avoid building python zips which is the default on windows as that's expensive
+build --nobuild_python_zip
+
 common --registry=file:///%workspace%/misc/bazel/registry
 common --registry=https://bcr.bazel.build
 
+common --@rules_dotnet//dotnet/settings:strict_deps=false
+
 try-import %workspace%/local.bazelrc

.bazelrc.internal

@@ -2,3 +2,9 @@
 
 common --registry=file:///%workspace%/ql/misc/bazel/registry
 common --registry=https://bcr.bazel.build
+
+# See bazelbuild/rules_dotnet#413: strict_deps in C# also appliy to 3rd-party deps, and when we pull
+# in (for example) the xunit package, there's no code in this at all, it just depends transitively on
+# its implementation packages without providing any code itself.
+# We either can depend on internal implementation details, or turn of strict deps.
+common --@rules_dotnet//dotnet/settings:strict_deps=false

.gitattributes

@@ -50,31 +50,40 @@
 *.dll -text
 *.pdb -text
 
-java/ql/test/stubs/**/*.java linguist-generated=true
-java/ql/test/experimental/stubs/**/*.java linguist-generated=true
+/java/ql/test/stubs/**/*.java linguist-generated=true
+/java/ql/test/experimental/stubs/**/*.java linguist-generated=true
+/java/kotlin-extractor/deps/*.jar filter=lfs diff=lfs merge=lfs -text
 
 # Force git not to modify line endings for go or html files under the go/ql directory
-go/ql/**/*.go -text
-go/ql/**/*.html -text
+/go/ql/**/*.go -text
+/go/ql/**/*.html -text
 # Force git not to modify line endings for go dbschemes
-go/*.dbscheme -text
+/go/*.dbscheme -text
 # Preserve unusual line ending from codeql-go merge
-go/extractor/opencsv/CSVReader.java -text
+/go/extractor/opencsv/CSVReader.java -text
 
 # For some languages, upgrade script testing references really old dbscheme
 # files from legacy upgrades that have CRLF line endings. Since upgrade
 # resolution relies on object hashes, we must suppress line ending conversion
 # for those testing dbscheme files.
-*/ql/lib/upgrades/initial/*.dbscheme -text
+/*/ql/lib/upgrades/initial/*.dbscheme -text
 
 # Auto-generated modeling for Python
-python/ql/lib/semmle/python/frameworks/data/internal/subclass-capture/*.yml linguist-generated=true
+/python/ql/lib/semmle/python/frameworks/data/internal/subclass-capture/*.yml linguist-generated=true
 
 # auto-generated bazel lock file
-ruby/extractor/cargo-bazel-lock.json linguist-generated=true
-ruby/extractor/cargo-bazel-lock.json -merge
+/ruby/extractor/cargo-bazel-lock.json linguist-generated=true
+/ruby/extractor/cargo-bazel-lock.json -merge
 
 # auto-generated files for the C# build
-csharp/paket.lock linguist-generated=true
-# needs eol=crlf, as `paket` touches this file and saves it als crlf
-csharp/.paket/Paket.Restore.targets linguist-generated=true eol=crlf
+/csharp/paket.lock linguist-generated=true
+# needs eol=crlf, as `paket` touches this file and saves it as crlf
+/csharp/.paket/Paket.Restore.targets linguist-generated=true eol=crlf
+/csharp/paket.main.bzl linguist-generated=true
+/csharp/paket.main_extension.bzl linguist-generated=true
+
+# ripunzip tool
+/misc/bazel/internal/ripunzip/ripunzip-* filter=lfs diff=lfs merge=lfs -text
+
+# swift prebuilt resources
+/swift/third_party/resource-dir/*.zip filter=lfs diff=lfs merge=lfs -text

.github/workflows/build-ripunzip.yml

@@ -0,0 +1,74 @@
+name: Build runzip
+
+on:
+  workflow_dispatch:
+    inputs:
+      ripunzip-version:
+        description: "what reference to checktout from google/runzip"
+        required: false
+        default: v1.2.1
+      openssl-version:
+        description: "what reference to checkout from openssl/openssl for Linux"
+        required: false
+        default: openssl-3.3.0
+
+jobs:
+  build:
+    strategy:
+      fail-fast: false
+      matrix:
+        os: [ubuntu-20.04, macos-12, windows-2019]
+    runs-on: ${{ matrix.os }}
+    steps:
+      - uses: actions/checkout@v4
+        with:
+          repository: google/ripunzip
+          ref: ${{ inputs.ripunzip-version }}
+      # we need to avoid ripunzip dynamically linking into libssl
+      # see https://github.com/sfackler/rust-openssl/issues/183
+      - if: runner.os == 'Linux'
+        name: checkout openssl
+        uses: actions/checkout@v4
+        with:
+          repository: openssl/openssl
+          path: openssl
+          ref: ${{ inputs.openssl-version }}
+      - if: runner.os == 'Linux'
+        name: build and install openssl with fPIC
+        shell: bash
+        working-directory: openssl
+        run: |
+          ./config -fPIC --prefix=$HOME/.local --openssldir=$HOME/.local/ssl
+          make -j $(nproc)
+          make install_sw -j $(nproc)
+      - if: runner.os == 'Linux'
+        name: build (linux)
+        shell: bash
+        run: |
+          env OPENSSL_LIB_DIR=$HOME/.local/lib64 OPENSSL_INCLUDE_DIR=$HOME/.local/include OPENSSL_STATIC=yes cargo build --release
+          mv target/release/ripunzip ripunzip-linux
+      - if: runner.os == 'Windows'
+        name: build (windows)
+        shell: bash
+        run: |
+          cargo build --release
+          mv target/release/ripunzip ripunzip-windows
+      - name: build (macOS)
+        if: runner.os == 'macOS'
+        shell: bash
+        run: |
+          rustup target install x86_64-apple-darwin
+          rustup target install aarch64-apple-darwin
+          cargo build --target x86_64-apple-darwin --release
+          cargo build --target aarch64-apple-darwin --release
+          lipo -create -output ripunzip-macos \
+            -arch x86_64 target/x86_64-apple-darwin/release/ripunzip \
+            -arch arm64 target/aarch64-apple-darwin/release/ripunzip
+      - uses: actions/upload-artifact@v4
+        with:
+          name: ripunzip-${{ runner.os }}
+          path: ripunzip-*
+      - name: Check built binary
+        shell: bash
+        run: |
+          ./ripunzip-* --version

.github/workflows/csharp-qltest.yml

@@ -65,7 +65,7 @@ jobs:
           key: csharp-qltest-${{ matrix.slice }}
       - name: Run QL tests
         run: |
-          codeql test run --threads=0 --ram 50000 --slice ${{ matrix.slice }} --search-path extractor-pack --check-databases --check-undefined-labels --check-repeated-labels --check-redefined-labels --consistency-queries ql/consistency-queries ql/test --compilation-cache "${{ steps.query-cache.outputs.cache-dir }}"
+          codeql test run --threads=0 --ram 50000 --slice ${{ matrix.slice }} --search-path "${{ github.workspace }}" --check-databases --check-undefined-labels --check-repeated-labels --check-redefined-labels --consistency-queries ql/consistency-queries ql/test --compilation-cache "${{ steps.query-cache.outputs.cache-dir }}"
         env:
           GITHUB_TOKEN: ${{ github.token }}
   unit-tests:
@@ -101,6 +101,6 @@ jobs:
           # Update existing stubs in the repo with the freshly generated ones
           mv "$STUBS_PATH/output/stubs/_frameworks" ql/test/resources/stubs/
           git status
-          codeql test run --threads=0 --search-path extractor-pack --check-databases --check-undefined-labels --check-repeated-labels --check-redefined-labels --consistency-queries ql/consistency-queries -- ql/test/library-tests/dataflow/flowsources/aspremote
+          codeql test run --threads=0 --search-path "${{ github.workspace }}" --check-databases --check-undefined-labels --check-repeated-labels --check-redefined-labels --consistency-queries ql/consistency-queries -- ql/test/library-tests/dataflow/flowsources/aspremote
         env:
           GITHUB_TOKEN: ${{ github.token }}

.github/workflows/go-tests-other-os.yml

@@ -7,6 +7,9 @@ on:
       - .github/workflows/go-tests-other-os.yml
       - .github/actions/**
       - codeql-workspace.yml
+      - MODULE.bazel
+      - .bazelrc
+      - misc/bazel/**
 
 permissions:
   contents: read

.github/workflows/go-tests.yml

@@ -15,6 +15,9 @@ on:
       - .github/workflows/go-tests.yml
       - .github/actions/**
       - codeql-workspace.yml
+      - MODULE.bazel
+      - .bazelrc
+      - misc/bazel/**
 
 permissions:
   contents: read

.github/workflows/kotlin-build.yml

@@ -0,0 +1,28 @@
+name: "Kotlin Build"
+
+on:
+  pull_request:
+    paths:
+      - "java/kotlin-extractor/**"
+      - "misc/bazel/**"
+      - "misc/codegen/**"
+      - "*.bazel*"
+      - .github/workflows/kotlin-build.yml
+    branches:
+      - main
+      - rc/*
+      - codeql-cli-*
+
+permissions:
+  contents: read
+
+jobs:
+  build:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+      - run: |
+          bazel query //java/kotlin-extractor/...
+          # only build the default version as a quick check that we can build from `codeql`
+          # the full official build will be checked by QLucie
+          bazel build //java/kotlin-extractor

.github/workflows/ql-for-ql-build.yml

@@ -49,20 +49,20 @@ jobs:
           key: ${{ runner.os }}-${{ steps.os_version.outputs.version }}-rust-cargo-${{ hashFiles('ql/**/Cargo.lock') }}
       - name: Release build
         if: steps.cache-extractor.outputs.cache-hit != 'true'
-        run: cd ql; ./scripts/create-extractor-pack.sh       
+        run: cd ql; ./scripts/create-extractor-pack.sh
         env:
-          GH_TOKEN: ${{ github.token }}   
+          GH_TOKEN: ${{ github.token }}
       - name: Cache compilation cache
         id: query-cache
         uses: ./.github/actions/cache-query-compilation
-        with: 
+        with:
           key: run-ql-for-ql
       - name: Make database and analyze
         run: |
           ./ql/target/release/buramu | tee deprecated.blame # Add a blame file for the extractor to parse.
-          ${CODEQL} database create -l=ql --search-path ql/extractor-pack ${DB}
+          ${CODEQL} database create -l=ql ${DB} --search-path "${{ github.workspace }}"
           ${CODEQL} database analyze -j0 --format=sarif-latest --output=ql-for-ql.sarif ${DB} ql/ql/src/codeql-suites/ql-code-scanning.qls  --compilation-cache "${{ steps.query-cache.outputs.cache-dir }}"
-        env: 
+        env:
           CODEQL: ${{ steps.find-codeql.outputs.codeql-path }}
           DB: ${{ runner.temp }}/DB
           LGTM_INDEX_FILTERS: |

.github/workflows/ql-for-ql-dataset_measure.yml

@@ -53,8 +53,8 @@ jobs:
       - name: Create database
         run: |
           "${CODEQL}" database create \
-            --search-path "ql/extractor-pack" \
-            --threads 4 \
+          --search-path "${{ github.workspace }}"
+          --threads 4 \
             --language ql --source-root "${{ github.workspace }}/repo" \
             "${{ runner.temp }}/database"
         env:

.github/workflows/ql-for-ql-tests.yml

@@ -49,15 +49,15 @@ jobs:
       - name: Cache compilation cache
         id: query-cache
         uses: ./.github/actions/cache-query-compilation
-        with: 
+        with:
           key: ql-for-ql-tests
       - name: Run QL tests
         run: |
-          "${CODEQL}" test run --check-databases --check-unused-labels --check-repeated-labels --check-redefined-labels --check-use-before-definition --search-path "${{ github.workspace }}/ql/extractor-pack" --consistency-queries ql/ql/consistency-queries --compilation-cache "${{ steps.query-cache.outputs.cache-dir }}" ql/ql/test
+          "${CODEQL}" test run --check-databases --check-unused-labels --check-repeated-labels --check-redefined-labels --check-use-before-definition --search-path "${{ github.workspace }}" --consistency-queries ql/ql/consistency-queries --compilation-cache "${{ steps.query-cache.outputs.cache-dir }}" ql/ql/test
         env:
           CODEQL: ${{ steps.find-codeql.outputs.codeql-path }}
 
-  other-os: 
+  other-os:
     strategy:
       matrix:
         os: [macos-latest, windows-latest]
@@ -65,7 +65,7 @@ jobs:
     runs-on: ${{ matrix.os }}
     steps:
       - uses: actions/checkout@v4
-      - name: Install GNU tar 
+      - name: Install GNU tar
         if: runner.os == 'macOS'
         run: |
           brew install gnu-tar
@@ -100,7 +100,7 @@ jobs:
       - name: Run a single QL tests - Unix
         if: runner.os != 'Windows'
         run: |
-          "${CODEQL}" test run --check-databases --search-path "${{ github.workspace }}/ql/extractor-pack" ql/ql/test/queries/style/DeadCode/DeadCode.qlref
+          "${CODEQL}" test run --check-databases --search-path "${{ github.workspace }}" ql/ql/test/queries/style/DeadCode/DeadCode.qlref
         env:
           CODEQL: ${{ steps.find-codeql.outputs.codeql-path }}
       - name: Run a single QL tests - Windows
@@ -108,5 +108,4 @@ jobs:
         shell: pwsh
         run: |
           $Env:PATH += ";$(dirname ${{ steps.find-codeql.outputs.codeql-path }})"
-          codeql test run --check-databases --search-path "${{ github.workspace }}/ql/extractor-pack" ql/ql/test/queries/style/DeadCode/DeadCode.qlref
-      
+          codeql test run --check-databases --search-path "${{ github.workspace }}" ql/ql/test/queries/style/DeadCode/DeadCode.qlref

.github/workflows/ruby-dataset-measure.yml

@@ -44,7 +44,7 @@ jobs:
       - name: Create database
         run: |
           codeql database create \
-            --search-path "${{ github.workspace }}/ruby/extractor-pack" \
+            --search-path "${{ github.workspace }}" \
             --threads 4 \
             --language ruby --source-root "${{ github.workspace }}/repo" \
             "${{ runner.temp }}/database"

.github/workflows/ruby-qltest.yml

@@ -64,10 +64,10 @@ jobs:
       - name: Cache compilation cache
         id: query-cache
         uses: ./.github/actions/cache-query-compilation
-        with: 
+        with:
           key: ruby-qltest
       - name: Run QL tests
         run: |
-          codeql test run --threads=0 --ram 50000 --search-path "${{ github.workspace }}/ruby/extractor-pack" --check-databases --check-undefined-labels --check-unused-labels --check-repeated-labels --check-redefined-labels --check-use-before-definition --consistency-queries ql/consistency-queries ql/test --compilation-cache "${{ steps.query-cache.outputs.cache-dir }}"
+          codeql test run --threads=0 --ram 50000 --search-path "${{ github.workspace }}" --check-databases --check-undefined-labels --check-unused-labels --check-repeated-labels --check-redefined-labels --check-use-before-definition --consistency-queries ql/consistency-queries ql/test --compilation-cache "${{ steps.query-cache.outputs.cache-dir }}"
         env:
           GITHUB_TOKEN: ${{ github.token }}

.github/workflows/swift.yml

@@ -68,21 +68,6 @@ jobs:
     steps:
       - uses: actions/checkout@v4
       - uses: ./swift/actions/run-ql-tests
-  integration-tests-linux:
-    if: github.repository_owner == 'github'
-    needs: build-and-test-linux
-    runs-on: ubuntu-latest-xl
-    steps:
-      - uses: actions/checkout@v4
-      - uses: ./swift/actions/run-integration-tests
-  integration-tests-macos:
-    if: ${{ github.repository_owner == 'github' && github.event_name == 'pull_request' }}
-    needs: build-and-test-macos
-    runs-on: macos-12-xl
-    timeout-minutes: 60
-    steps:
-      - uses: actions/checkout@v4
-      - uses: ./swift/actions/run-integration-tests
   clang-format:
     if : ${{ github.event_name == 'pull_request' }}
     runs-on: ubuntu-latest

.github/workflows/zipmerge-test.yml

@@ -0,0 +1,23 @@
+name: "Test zipmerge code"
+
+on:
+  pull_request:
+    paths:
+      - "misc/bazel/internal/zipmerge/**"
+      - "MODULE.bazel"
+      - ".bazelrc*"
+    branches:
+      - main
+      - "rc/*"
+
+permissions:
+  contents: read
+
+jobs:
+  test:
+    runs-on: ubuntu-latest
+
+    steps:
+      - uses: actions/checkout@v4
+      - run: |
+          bazel test //misc/bazel/internal/zipmerge:test --test_output=all

.gitignore

@@ -62,3 +62,6 @@ node_modules/
 
 # Temporary folders for working with generated models
 .model-temp
+
+# bazel-built in-tree extractor packs
+/*/extractor-pack

.lfsconfig

@@ -2,4 +2,6 @@
 # codeql is publicly forked by many users, and we don't want any LFS file polluting their working
 # copies. We therefore exclude everything by default.
 # For files required by bazel builds, use rules in `misc/bazel/lfs.bzl` to download them on demand.
+# we go for `fetchinclude` to something not exsiting rather than `fetchexclude = *` because the
+# former is easier to override (with `git -c` or a local git config) to fetch something specific
 fetchinclude = /nothing

BUILD.bazel

@@ -0,0 +1 @@
+exports_files(["LICENSE"])

MODULE.bazel

@@ -22,10 +22,22 @@ bazel_dep(name = "bazel_skylib", version = "1.5.0")
 bazel_dep(name = "abseil-cpp", version = "20240116.0", repo_name = "absl")
 bazel_dep(name = "nlohmann_json", version = "3.11.3", repo_name = "json")
 bazel_dep(name = "fmt", version = "10.0.0")
+bazel_dep(name = "rules_kotlin", version = "1.9.4-codeql.1")
 bazel_dep(name = "gazelle", version = "0.36.0")
+bazel_dep(name = "rules_dotnet", version = "0.15.1")
+bazel_dep(name = "googletest", version = "1.14.0.bcr.1")
 
 bazel_dep(name = "buildifier_prebuilt", version = "6.4.0", dev_dependency = True)
 
+dotnet = use_extension("@rules_dotnet//dotnet:extensions.bzl", "dotnet")
+dotnet.toolchain(dotnet_version = "8.0.101")
+use_repo(dotnet, "dotnet_toolchains")
+
+register_toolchains("@dotnet_toolchains//:all")
+
+csharp_main_extension = use_extension("//csharp:paket.main_extension.bzl", "main_extension")
+use_repo(csharp_main_extension, "paket.main")
+
 pip = use_extension("@rules_python//python/extensions:pip.bzl", "pip")
 pip.parse(
     hub_name = "codegen_deps",
@@ -54,9 +66,84 @@ node.toolchain(
 )
 use_repo(node, "nodejs", "nodejs_toolchains")
 
+kotlin_extractor_deps = use_extension("//java/kotlin-extractor:deps.bzl", "kotlin_extractor_deps")
+
+# following list can be kept in sync by running `bazel mod tidy` in `codeql`
+use_repo(
+    kotlin_extractor_deps,
+    "codeql_kotlin_defaults",
+    "codeql_kotlin_embeddable",
+    "kotlin-compiler-1.5.0",
+    "kotlin-compiler-1.5.10",
+    "kotlin-compiler-1.5.20",
+    "kotlin-compiler-1.5.30",
+    "kotlin-compiler-1.6.0",
+    "kotlin-compiler-1.6.20",
+    "kotlin-compiler-1.7.0",
+    "kotlin-compiler-1.7.20",
+    "kotlin-compiler-1.8.0",
+    "kotlin-compiler-1.9.0-Beta",
+    "kotlin-compiler-1.9.20-Beta",
+    "kotlin-compiler-2.0.0-RC1",
+    "kotlin-compiler-embeddable-1.5.0",
+    "kotlin-compiler-embeddable-1.5.10",
+    "kotlin-compiler-embeddable-1.5.20",
+    "kotlin-compiler-embeddable-1.5.30",
+    "kotlin-compiler-embeddable-1.6.0",
+    "kotlin-compiler-embeddable-1.6.20",
+    "kotlin-compiler-embeddable-1.7.0",
+    "kotlin-compiler-embeddable-1.7.20",
+    "kotlin-compiler-embeddable-1.8.0",
+    "kotlin-compiler-embeddable-1.9.0-Beta",
+    "kotlin-compiler-embeddable-1.9.20-Beta",
+    "kotlin-compiler-embeddable-2.0.0-RC1",
+    "kotlin-stdlib-1.5.0",
+    "kotlin-stdlib-1.5.10",
+    "kotlin-stdlib-1.5.20",
+    "kotlin-stdlib-1.5.30",
+    "kotlin-stdlib-1.6.0",
+    "kotlin-stdlib-1.6.20",
+    "kotlin-stdlib-1.7.0",
+    "kotlin-stdlib-1.7.20",
+    "kotlin-stdlib-1.8.0",
+    "kotlin-stdlib-1.9.0-Beta",
+    "kotlin-stdlib-1.9.20-Beta",
+    "kotlin-stdlib-2.0.0-RC1",
+)
+
 go_sdk = use_extension("@rules_go//go:extensions.bzl", "go_sdk")
 go_sdk.download(version = "1.22.2")
 
+lfs_files = use_repo_rule("//misc/bazel:lfs.bzl", "lfs_files")
+
+lfs_files(
+    name = "ripunzip-linux",
+    srcs = ["//misc/bazel/internal/ripunzip:ripunzip-linux"],
+    executable = True,
+)
+
+lfs_files(
+    name = "ripunzip-windows",
+    srcs = ["//misc/bazel/internal/ripunzip:ripunzip-windows.exe"],
+    executable = True,
+)
+
+lfs_files(
+    name = "ripunzip-macos",
+    srcs = ["//misc/bazel/internal/ripunzip:ripunzip-macos"],
+    executable = True,
+)
+
+lfs_files(
+    name = "swift-resource-dir-linux",
+    srcs = ["//swift/third_party/resource-dir:resource-dir-linux.zip"],
+)
+
+lfs_files(
+    name = "swift-resource-dir-macos",
+    srcs = ["//swift/third_party/resource-dir:resource-dir-macos.zip"],
+)
+
 register_toolchains(
     "@nodejs_toolchains//:all",
 )

codeql-workspace.yml

@@ -6,19 +6,16 @@ provide:
   - "*/ql/consistency-queries/qlpack.yml"
   - "*/ql/automodel/src/qlpack.yml"
   - "*/ql/automodel/test/qlpack.yml"
+  - "*/extractor-pack/codeql-extractor.yml"
   - "python/extractor/qlpack.yml"
   - "shared/**/qlpack.yml"
   - "cpp/ql/test/query-tests/Security/CWE/CWE-190/semmle/tainted/qlpack.yml"
   - "go/ql/config/legacy-support/qlpack.yml"
-  - "go/build/codeql-extractor-go/codeql-extractor.yml"
   - "csharp/ql/campaigns/Solorigate/lib/qlpack.yml"
   - "csharp/ql/campaigns/Solorigate/src/qlpack.yml"
   - "csharp/ql/campaigns/Solorigate/test/qlpack.yml"
   - "misc/legacy-support/*/qlpack.yml"
   - "misc/suite-helpers/qlpack.yml"
-  - "ruby/extractor-pack/codeql-extractor.yml"
-  - "swift/extractor-pack/codeql-extractor.yml"
-  - "ql/extractor-pack/codeql-extractor.yml"
   - ".github/codeql/extensions/**/codeql-pack.yml"
 
 versionPolicies:

config/dbscheme-fragments.json

@@ -28,6 +28,7 @@
     "/*- Yaml dbscheme -*/",
     "/*- Blame dbscheme -*/",
     "/*- JSON dbscheme -*/",
-    "/*- Python dbscheme -*/"
+    "/*- Python dbscheme -*/",
+    "/*- Empty location -*/"
   ]
 }

config/identical-files.json

@@ -364,5 +364,9 @@
   "Python model summaries test extension": [
     "python/ql/test/library-tests/dataflow/model-summaries/InlineTaintTest.ext.yml",
     "python/ql/test/library-tests/dataflow/model-summaries/NormalDataflowTest.ext.yml"
+  ],
+  "shared tree-sitter extractor cargo.toml": [
+    "shared/tree-sitter-extractor/Cargo.toml",
+    "ruby/extractor/codeql-extractor-fake-crate/Cargo.toml"
   ]
 }

cpp/downgrades/BUILD.bazel

@@ -6,7 +6,7 @@ pkg_files(
         ["**"],
         exclude = ["BUILD.bazel"],
     ),
-    prefix = "cpp/downgrades",
+    prefix = "downgrades",
     strip_prefix = strip_prefix.from_pkg(),
     visibility = ["//cpp:__pkg__"],
 )

cpp/ql/lib/BUILD.bazel

@@ -5,11 +5,9 @@ package(default_visibility = ["//cpp:__pkg__"])
 pkg_files(
     name = "dbscheme",
     srcs = ["semmlecode.cpp.dbscheme"],
-    prefix = "cpp",
 )
 
 pkg_files(
     name = "dbscheme-stats",
     srcs = ["semmlecode.cpp.dbscheme.stats"],
-    prefix = "cpp",
 )

cpp/ql/lib/CHANGELOG.md

@@ -1,3 +1,9 @@
+## 1.0.0
+
+### Breaking Changes
+
+* CodeQL package management is now generally available, and all GitHub-produced CodeQL packages have had their version numbers increased to 1.0.0.
+
 ## 0.13.1
 
 No user-facing changes.

cpp/ql/lib/change-notes/released/1.0.0.md

@@ -0,0 +1,5 @@
+## 1.0.0
+
+### Breaking Changes
+
+* CodeQL package management is now generally available, and all GitHub-produced CodeQL packages have had their version numbers increased to 1.0.0.

cpp/ql/lib/codeql-pack.release.yml

@@ -1,2 +1,2 @@
 ---
-lastReleaseVersion: 0.13.1
+lastReleaseVersion: 1.0.0

cpp/ql/lib/qlpack.yml

@@ -1,5 +1,5 @@
 name: codeql/cpp-all
-version: 0.13.2-dev
+version: 1.0.1-dev
 groups: cpp
 dbscheme: semmlecode.cpp.dbscheme
 extractor: cpp

cpp/ql/lib/semmle/code/cpp/dataflow/internal/DataFlowDispatch.qll

@@ -9,7 +9,7 @@ private import DataFlowUtil
 /**
  * Gets a function that might be called by `call`.
  */
-Function viableCallable(DataFlowCall call) {
+DataFlowCallable viableCallable(DataFlowCall call) {
   result = call.(Call).getTarget()
   or
   // If the target of the call does not have a body in the snapshot, it might

cpp/ql/lib/semmle/code/cpp/dataflow/internal/DataFlowPrivate.qll

@@ -242,7 +242,17 @@ class CastNode extends Node {
   CastNode() { none() } // stub implementation
 }
 
-class DataFlowCallable = Function;
+class DataFlowCallable extends Function {
+  /** Gets a best-effort total ordering. */
+  int totalorder() {
+    this =
+      rank[result](DataFlowCallable c, string file, int startline, int startcolumn |
+        c.getLocation().hasLocationInfo(file, startline, startcolumn, _, _)
+      |
+        c order by file, startline, startcolumn
+      )
+  }
+}
 
 class DataFlowExpr = Expr;
 
@@ -261,10 +271,28 @@ class DataFlowCall extends Expr instanceof Call {
   ExprNode getNode() { result.getExpr() = this }
 
   /** Gets the enclosing callable of this call. */
-  Function getEnclosingCallable() { result = this.getEnclosingFunction() }
+  DataFlowCallable getEnclosingCallable() { result = this.getEnclosingFunction() }
+
+  /** Gets a best-effort total ordering. */
+  int totalorder() {
+    this =
+      rank[result](DataFlowCall c, int startline, int startcolumn |
+        c.getLocation().hasLocationInfo(_, startline, startcolumn, _, _)
+      |
+        c order by startline, startcolumn
+      )
+  }
 }
 
-predicate isUnreachableInCall(Node n, DataFlowCall call) { none() } // stub implementation
+class NodeRegion instanceof Unit {
+  string toString() { result = "NodeRegion" }
+
+  predicate contains(Node n) { none() }
+
+  int totalOrder() { result = 1 }
+}
+
+predicate isUnreachableInCall(NodeRegion nr, DataFlowCall call) { none() } // stub implementation
 
 /**
  * Holds if access paths with `c` at their head always should be tracked at high

cpp/ql/lib/semmle/code/cpp/ir/dataflow/internal/DataFlowPrivate.qll

@@ -1062,6 +1062,16 @@ class DataFlowCallable extends TDataFlowCallable {
     result = this.asSummarizedCallable() or // SummarizedCallable = Function (in CPP)
     result = this.asSourceCallable()
   }
+
+  /** Gets a best-effort total ordering. */
+  int totalorder() {
+    this =
+      rank[result](DataFlowCallable c, string file, int startline, int startcolumn |
+        c.getLocation().hasLocationInfo(file, startline, startcolumn, _, _)
+      |
+        c order by file, startline, startcolumn
+      )
+  }
 }
 
 /**
@@ -1159,6 +1169,16 @@ class DataFlowCall extends TDataFlowCall {
    * Gets the location of this call.
    */
   Location getLocation() { none() }
+
+  /** Gets a best-effort total ordering. */
+  int totalorder() {
+    this =
+      rank[result](DataFlowCall c, int startline, int startcolumn |
+        c.getLocation().hasLocationInfo(_, startline, startcolumn, _, _)
+      |
+        c order by startline, startcolumn
+      )
+  }
 }
 
 /**
@@ -1247,43 +1267,53 @@ module IsUnreachableInCall {
     any(G::IRGuardCondition guard).ensuresLt(left, right, k, block, areEqual)
   }
 
-  predicate isUnreachableInCall(Node n, DataFlowCall call) {
+  class NodeRegion instanceof IRBlock {
+    string toString() { result = "NodeRegion" }
+
+    predicate contains(Node n) { this = n.getBasicBlock() }
+
+    int totalOrder() {
+      this =
+        rank[result](IRBlock b, int startline, int startcolumn |
+          b.getLocation().hasLocationInfo(_, startline, startcolumn, _, _)
+        |
+          b order by startline, startcolumn
+        )
+    }
+  }
+
+  predicate isUnreachableInCall(NodeRegion block, DataFlowCall call) {
     exists(
       InstructionDirectParameterNode paramNode, ConstantIntegralTypeArgumentNode arg,
-      IntegerConstantInstruction constant, int k, Operand left, Operand right, IRBlock block
+      IntegerConstantInstruction constant, int k, Operand left, Operand right, int argval
     |
       // arg flows into `paramNode`
-      DataFlowImplCommon::viableParamArg(call, paramNode, arg) and
+      DataFlowImplCommon::viableParamArg(call, pragma[only_bind_into](paramNode),
+        pragma[only_bind_into](arg)) and
       left = constant.getAUse() and
       right = valueNumber(paramNode.getInstruction()).getAUse() and
-      block = n.getBasicBlock()
+      argval = arg.getValue()
     |
       // and there's a guard condition which ensures that the result of `left == right + k` is `areEqual`
-      exists(boolean areEqual |
-        ensuresEq(pragma[only_bind_into](left), pragma[only_bind_into](right),
-          pragma[only_bind_into](k), pragma[only_bind_into](block), areEqual)
-      |
+      exists(boolean areEqual | ensuresEq(left, right, k, block, areEqual) |
         // this block ensures that left = right + k, but it holds that `left != right + k`
         areEqual = true and
-        constant.getValue().toInt() != arg.getValue() + k
+        constant.getValue().toInt() != argval + k
         or
         // this block ensures that or `left != right + k`, but it holds that `left = right + k`
         areEqual = false and
-        constant.getValue().toInt() = arg.getValue() + k
+        constant.getValue().toInt() = argval + k
       )
       or
       // or there's a guard condition which ensures that the result of `left < right + k` is `isLessThan`
-      exists(boolean isLessThan |
-        ensuresLt(pragma[only_bind_into](left), pragma[only_bind_into](right),
-          pragma[only_bind_into](k), pragma[only_bind_into](block), isLessThan)
-      |
+      exists(boolean isLessThan | ensuresLt(left, right, k, block, isLessThan) |
         isLessThan = true and
         // this block ensures that `left < right + k`, but it holds that `left >= right + k`
-        constant.getValue().toInt() >= arg.getValue() + k
+        constant.getValue().toInt() >= argval + k
         or
         // this block ensures that `left >= right + k`, but it holds that `left < right + k`
         isLessThan = false and
-        constant.getValue().toInt() < arg.getValue() + k
+        constant.getValue().toInt() < argval + k
       )
     )
   }

cpp/ql/src/CHANGELOG.md

@@ -1,3 +1,14 @@
+## 1.0.0
+
+### Breaking Changes
+
+* CodeQL package management is now generally available, and all GitHub-produced CodeQL packages have had their version numbers increased to 1.0.0.
+
+### Minor Analysis Improvements
+
+* The "Use of unique pointer after lifetime ends" query (`cpp/use-of-unique-pointer-after-lifetime-ends`) no longer reports an alert when the pointer is converted to a boolean
+* The "Variable not initialized before use" query (`cpp/not-initialised`) no longer reports an alert on static variables.
+
 ## 0.9.12
 
 ### New Queries

cpp/ql/src/Security/CWE/CWE-131/NoSpaceForZeroTerminator.qhelp

@@ -12,8 +12,8 @@ the required buffer size, but do not allocate space for the zero terminator.
 </overview>
 <recommendation>
 <p>
-The expression highlighted by this rule creates a buffer that is of insufficient size to contain
-the data being copied. This makes the code vulnerable to buffer overflow which can result in anything from a segmentation fault to a security vulnerability (particularly if the array is on stack-allocated memory).
+The highlighted code segment creates a buffer without ensuring it's large enough to accommodate the copied data.
+This leaves the code susceptible to a buffer overflow attack, which could lead to anything from program crashes to malicious code execution.
 </p>
 
 <p>

cpp/ql/src/Security/CWE/CWE-676/DangerousFunctionOverflow.ql

@@ -17,5 +17,6 @@ import cpp
 from FunctionCall call, Function target
 where
   call.getTarget() = target and
-  target.hasGlobalOrStdName("gets")
+  target.hasGlobalOrStdName("gets") and
+  target.getNumberOfParameters() = 1
 select call, "'gets' does not guard against buffer overflow."

cpp/ql/src/change-notes/2014-06-05-gets-parameter.md

@@ -0,0 +1,4 @@
+---
+category: minorAnalysis
+---
+* The `cpp/dangerous-function-overflow` no longer produces a false positive alert when the `gets` function does not have exactly one parameter.

cpp/ql/src/change-notes/2024-05-19-avoid-reporting-static-variable.md

@@ -1,4 +0,0 @@
----
-category: minorAnalysis
----
-* The "Variable not initialized before use" query (`cpp/not-initialised`) no longer reports an alert on static variables.

cpp/ql/src/change-notes/2024-05-22-use-of-unique-pointer-after-lifetime-ends-fp.md

@@ -1,4 +0,0 @@
----
-category: minorAnalysis
----
-* The "Use of unique pointer after lifetime ends" query (`cpp/use-of-unique-pointer-after-lifetime-ends`) no longer reports an alert when the pointer is converted to a boolean

cpp/ql/src/change-notes/released/1.0.0.md

@@ -0,0 +1,10 @@
+## 1.0.0
+
+### Breaking Changes
+
+* CodeQL package management is now generally available, and all GitHub-produced CodeQL packages have had their version numbers increased to 1.0.0.
+
+### Minor Analysis Improvements
+
+* The "Use of unique pointer after lifetime ends" query (`cpp/use-of-unique-pointer-after-lifetime-ends`) no longer reports an alert when the pointer is converted to a boolean
+* The "Variable not initialized before use" query (`cpp/not-initialised`) no longer reports an alert on static variables.

cpp/ql/src/codeql-pack.release.yml

@@ -1,2 +1,2 @@
 ---
-lastReleaseVersion: 0.9.12
+lastReleaseVersion: 1.0.0

cpp/ql/src/qlpack.yml

@@ -1,5 +1,5 @@
 name: codeql/cpp-queries
-version: 0.9.13-dev
+version: 1.0.1-dev
 groups:
   - cpp
   - queries

cpp/ql/test/experimental/query-tests/Security/CWE/CWE-193/constant-size/ConstantSizeArrayOffByOne.expected

@@ -61,7 +61,6 @@ edges
 | test.cpp:289:19:289:25 | buffer3 | test.cpp:277:35:277:35 | p | provenance |  |
 | test.cpp:289:19:289:25 | buffer3 | test.cpp:289:19:289:25 | buffer3 | provenance |  |
 | test.cpp:292:25:292:27 | arr | test.cpp:299:16:299:21 | access to array | provenance | Config |
-| test.cpp:292:25:292:27 | arr | test.cpp:299:16:299:21 | access to array | provenance | Config |
 | test.cpp:306:20:306:23 | arr1 | test.cpp:292:25:292:27 | arr | provenance |  |
 | test.cpp:306:20:306:23 | arr1 | test.cpp:306:20:306:23 | arr1 | provenance |  |
 | test.cpp:309:20:309:23 | arr2 | test.cpp:292:25:292:27 | arr | provenance |  |
@@ -159,7 +158,6 @@ nodes
 | test.cpp:289:19:289:25 | buffer3 | semmle.label | buffer3 |
 | test.cpp:289:19:289:25 | buffer3 | semmle.label | buffer3 |
 | test.cpp:292:25:292:27 | arr | semmle.label | arr |
-| test.cpp:292:25:292:27 | arr | semmle.label | arr |
 | test.cpp:299:16:299:21 | access to array | semmle.label | access to array |
 | test.cpp:306:20:306:23 | arr1 | semmle.label | arr1 |
 | test.cpp:306:20:306:23 | arr1 | semmle.label | arr1 |

cpp/ql/test/library-tests/padding/options

@@ -0,0 +1 @@
+semmle-extractor-options: -D__x86_64=1

cpp/ql/test/query-tests/Security/CWE/CWE-676/semmle/PotentiallyDangerousFunction/test.c

@@ -36,7 +36,7 @@ char *gets(char *s);
 
 void testGets() {
 	char buf1[1024];
-	char buf2 = malloc(1024);
+	char *buf2 = malloc(1024);
 	char *s;
 
 	gets(buf1); // BAD: use of gets

cpp/ql/test/query-tests/Security/CWE/CWE-676/semmle/PotentiallyDangerousFunction/test.cpp

@@ -0,0 +1,7 @@
+char *gets();
+
+void testOtherGets() {
+	char *s;
+
+	s = gets(); // GOOD: this is not the gets from stdio.h
+}

csharp/.gitignore

@@ -14,5 +14,4 @@ csharp.log
 .vscode/launch.json
 
 extractor/Semmle.Extraction.CSharp.Driver/Properties/launchSettings.json
-extractor-pack
 paket-files/

csharp/BUILD.bazel

@@ -1,3 +1,6 @@
+load("@rules_pkg//pkg:mappings.bzl", "pkg_filegroup", "pkg_files")
+load("//misc/bazel:pkg.bzl", "codeql_pack", "codeql_pkg_files_overlay")
+
 package(default_visibility = ["//visibility:public"])
 
 alias(
@@ -9,3 +12,70 @@ alias(
     name = "dbscheme-stats",
     actual = "//csharp/ql/lib:dbscheme-stats",
 )
+
+pkg_files(
+    name = "dbscheme-group",
+    srcs = [
+        ":dbscheme",
+        ":dbscheme-stats",
+    ],
+    strip_prefix = None,
+)
+
+pkg_files(
+    name = "extractor-asp",
+    srcs = [
+        "@semmle_code//extractor-asp:extractor-asp-fat",
+    ],
+    prefix = "tools",
+    renames = {
+        "@semmle_code//extractor-asp:extractor-asp-fat": "extractor-asp.jar",
+    },
+)
+
+pkg_filegroup(
+    name = "db-files",
+    srcs = [
+        ":dbscheme-group",
+        "//csharp/downgrades",
+    ],
+)
+
+pkg_files(
+    name = "extra-files",
+    srcs = [
+        ":codeql-extractor.yml",
+        "//:LICENSE",
+    ],
+)
+
+codeql_pkg_files_overlay(
+    name = "extractor-arch-overlay",
+    srcs = [
+        "//csharp/autobuilder/Semmle.Autobuild.CSharp",
+        "//csharp/extractor/Semmle.Extraction.CSharp.Driver",
+        "//csharp/extractor/Semmle.Extraction.CSharp.Standalone",
+    ],
+)
+
+codeql_pack(
+    name = "csharp",
+    srcs = [
+        ":dbscheme-group",
+        ":extra-files",
+        ":extractor-arch-overlay",
+        ":extractor-asp",
+        "//csharp/downgrades",
+        "//csharp/tools",
+    ],
+)
+
+test_suite(
+    name = "unit-tests",
+    tags = ["csharp"],
+    tests = [
+        "//csharp/autobuilder/Semmle.Autobuild.CSharp.Tests",
+        "//csharp/autobuilder/Semmle.Autobuild.Cpp.Tests",
+        "//csharp/extractor/Semmle.Extraction.Tests",
+    ],
+)

csharp/autobuilder/Semmle.Autobuild.CSharp.Tests/BUILD.bazel

@@ -0,0 +1,18 @@
+load(
+    "//misc/bazel:csharp.bzl",
+    "codeql_xunit_test",
+)
+
+codeql_xunit_test(
+    name = "Semmle.Autobuild.CSharp.Tests",
+    srcs = glob([
+        "*.cs",
+        "Properties/*.cs",
+    ]),
+    deps = [
+        "//csharp/autobuilder/Semmle.Autobuild.CSharp:bin/Semmle.Autobuild.CSharp",
+        "//csharp/autobuilder/Semmle.Autobuild.Shared",
+        "@paket.main//microsoft.net.test.sdk",
+        "@paket.main//system.io.filesystem",
+    ],
+)

csharp/autobuilder/Semmle.Autobuild.CSharp.Tests/BuildScripts.cs

@@ -215,9 +215,9 @@ namespace Semmle.Autobuild.CSharp.Tests
 
     internal class TestDiagnosticWriter : IDiagnosticsWriter
     {
-        public IList<DiagnosticMessage> Diagnostics { get; } = new List<DiagnosticMessage>();
+        public IList<Semmle.Util.DiagnosticMessage> Diagnostics { get; } = new List<Semmle.Util.DiagnosticMessage>();
 
-        public void AddEntry(DiagnosticMessage message) => this.Diagnostics.Add(message);
+        public void AddEntry(Semmle.Util.DiagnosticMessage message) => this.Diagnostics.Add(message);
 
         public void Dispose() { }
     }

csharp/autobuilder/Semmle.Autobuild.CSharp/BUILD.bazel

@@ -0,0 +1,22 @@
+load(
+    "//misc/bazel:csharp.bzl",
+    "codeql_csharp_binary",
+)
+
+codeql_csharp_binary(
+    name = "Semmle.Autobuild.CSharp",
+    srcs = glob([
+        "*.cs",
+        "Properties/*.cs",
+    ]),
+    visibility = ["//csharp:__subpackages__"],
+    deps = [
+        "//csharp/autobuilder/Semmle.Autobuild.Shared",
+        "//csharp/extractor/Semmle.Extraction.CSharp",
+        "//csharp/extractor/Semmle.Extraction.CSharp.DependencyFetching",
+        "//csharp/extractor/Semmle.Extraction.CSharp.Standalone:bin/Semmle.Extraction.CSharp.Standalone",
+        "//csharp/extractor/Semmle.Util",
+        "@paket.main//microsoft.build",
+        "@paket.main//newtonsoft.json",
+    ],
+)

csharp/autobuilder/Semmle.Autobuild.Cpp.Tests/BUILD.bazel

@@ -0,0 +1,18 @@
+load(
+    "//misc/bazel:csharp.bzl",
+    "codeql_xunit_test",
+)
+
+codeql_xunit_test(
+    name = "Semmle.Autobuild.Cpp.Tests",
+    srcs = glob([
+        "*.cs",
+        "Properties/*.cs",
+    ]),
+    deps = [
+        "//csharp/autobuilder/Semmle.Autobuild.Cpp:bin/Semmle.Autobuild.Cpp",
+        "//csharp/autobuilder/Semmle.Autobuild.Shared",
+        "@paket.main//microsoft.net.test.sdk",
+        "@paket.main//system.io.filesystem",
+    ],
+)

csharp/autobuilder/Semmle.Autobuild.Cpp.Tests/BuildScripts.cs

@@ -200,9 +200,9 @@ namespace Semmle.Autobuild.Cpp.Tests
 
     internal class TestDiagnosticWriter : IDiagnosticsWriter
     {
-        public IList<DiagnosticMessage> Diagnostics { get; } = new List<DiagnosticMessage>();
+        public IList<Semmle.Util.DiagnosticMessage> Diagnostics { get; } = new List<Semmle.Util.DiagnosticMessage>();
 
-        public void AddEntry(DiagnosticMessage message) => this.Diagnostics.Add(message);
+        public void AddEntry(Semmle.Util.DiagnosticMessage message) => this.Diagnostics.Add(message);
 
         public void Dispose() { }
     }

csharp/autobuilder/Semmle.Autobuild.Cpp/BUILD.bazel

@@ -0,0 +1,18 @@
+load(
+    "//misc/bazel:csharp.bzl",
+    "codeql_csharp_binary",
+)
+
+codeql_csharp_binary(
+    name = "Semmle.Autobuild.Cpp",
+    srcs = glob([
+        "*.cs",
+        "Properties/*.cs",
+    ]),
+    visibility = ["//visibility:public"],
+    deps = [
+        "//csharp/autobuilder/Semmle.Autobuild.Shared",
+        "//csharp/extractor/Semmle.Util",
+        "@paket.main//microsoft.build",
+    ],
+)

csharp/autobuilder/Semmle.Autobuild.Shared/BUILD.bazel

@@ -0,0 +1,17 @@
+load(
+    "//misc/bazel:csharp.bzl",
+    "codeql_csharp_library",
+)
+
+codeql_csharp_library(
+    name = "Semmle.Autobuild.Shared",
+    srcs = glob([
+        "*.cs",
+        "Properties/*.cs",
+    ]),
+    visibility = ["//visibility:public"],
+    deps = [
+        "//csharp/extractor/Semmle.Util",
+        "@paket.main//microsoft.build",
+    ],
+)

csharp/documentation/library-coverage/coverage.csv

@@ -4,41 +4,41 @@ Amazon.Lambda.Core,10,,,,,,,,,,,10,,,,,,,,,,,
 Dapper,55,42,1,,,,,,,,,,55,,42,,,,,,,,1
 ILCompiler,,,81,,,,,,,,,,,,,,,,,,,81,
 ILLink.RoslynAnalyzer,,,63,,,,,,,,,,,,,,,,,,,63,
-ILLink.Shared,,,32,,,,,,,,,,,,,,,,,,,29,3
+ILLink.Shared,,,32,,,,,,,,,,,,,,,,,,,30,2
 ILLink.Tasks,,,3,,,,,,,,,,,,,,,,,,,3,
-Internal.IL,,,69,,,,,,,,,,,,,,,,,,,67,2
+Internal.IL,,,46,,,,,,,,,,,,,,,,,,,44,2
 Internal.Pgo,,,9,,,,,,,,,,,,,,,,,,,8,1
-Internal.TypeSystem,,,367,,,,,,,,,,,,,,,,,,,331,36
+Internal.TypeSystem,,,291,,,,,,,,,,,,,,,,,,,275,16
 JsonToItemsTaskFactory,,,5,,,,,,,,,,,,,,,,,,,5,
 Microsoft.Android.Build,,,14,,,,,,,,,,,,,,,,,,,14,
 Microsoft.Apple.Build,,,5,,,,,,,,,,,,,,,,,,,5,
 Microsoft.ApplicationBlocks.Data,28,,,,,,,,,,,,28,,,,,,,,,,
-Microsoft.CSharp,,,24,,,,,,,,,,,,,,,,,,,24,
-Microsoft.Diagnostics.Tools.Pgo,,,13,,,,,,,,,,,,,,,,,,,13,
+Microsoft.CSharp,,,10,,,,,,,,,,,,,,,,,,,10,
+Microsoft.Diagnostics.Tools.Pgo,,,12,,,,,,,,,,,,,,,,,,,12,
 Microsoft.EntityFrameworkCore,6,,12,,,,,,,,,,6,,,,,,,,,,12
 Microsoft.Extensions.Caching.Distributed,,,9,,,,,,,,,,,,,,,,,,,9,
 Microsoft.Extensions.Caching.Memory,,,30,,,,,,,,,,,,,,,,,,,29,1
-Microsoft.Extensions.Configuration,,2,83,,,,,,,,,,,,,2,,,,,,81,2
-Microsoft.Extensions.DependencyInjection,,,120,,,,,,,,,,,,,,,,,,,120,
-Microsoft.Extensions.DependencyModel,,,12,,,,,,,,,,,,,,,,,,,12,
-Microsoft.Extensions.Diagnostics.Metrics,,,13,,,,,,,,,,,,,,,,,,,13,
+Microsoft.Extensions.Configuration,,2,77,,,,,,,,,,,,,2,,,,,,76,1
+Microsoft.Extensions.DependencyInjection,,,96,,,,,,,,,,,,,,,,,,,95,1
+Microsoft.Extensions.DependencyModel,,,9,,,,,,,,,,,,,,,,,,,9,
+Microsoft.Extensions.Diagnostics.Metrics,,,15,,,,,,,,,,,,,,,,,,,15,
 Microsoft.Extensions.FileProviders,,,15,,,,,,,,,,,,,,,,,,,15,
 Microsoft.Extensions.FileSystemGlobbing,,,16,,,,,,,,,,,,,,,,,,,14,2
-Microsoft.Extensions.Hosting,,,23,,,,,,,,,,,,,,,,,,,22,1
+Microsoft.Extensions.Hosting,,,26,,,,,,,,,,,,,,,,,,,25,1
 Microsoft.Extensions.Http,,,8,,,,,,,,,,,,,,,,,,,8,
-Microsoft.Extensions.Logging,,,60,,,,,,,,,,,,,,,,,,,59,1
+Microsoft.Extensions.Logging,,,53,,,,,,,,,,,,,,,,,,,52,1
 Microsoft.Extensions.Options,,,8,,,,,,,,,,,,,,,,,,,8,
 Microsoft.Extensions.Primitives,,,64,,,,,,,,,,,,,,,,,,,64,
-Microsoft.Interop,,,78,,,,,,,,,,,,,,,,,,,78,
+Microsoft.Interop,,,73,,,,,,,,,,,,,,,,,,,73,
 Microsoft.NET.Build.Tasks,,,1,,,,,,,,,,,,,,,,,,,1,
 Microsoft.NET.WebAssembly.Webcil,,,7,,,,,,,,,,,,,,,,,,,7,
-Microsoft.VisualBasic,,,10,,,,,,,,,,,,,,,,,,,5,5
+Microsoft.VisualBasic,,,6,,,,,,,,,,,,,,,,,,,1,5
 Microsoft.WebAssembly.Build.Tasks,,,3,,,,,,,,,,,,,,,,,,,3,
 Microsoft.Win32,,4,4,,,,,,,,,,,,,,,,,,4,4,
-Mono.Linker,,,161,,,,,,,,,,,,,,,,,,,161,
+Mono.Linker,,,158,,,,,,,,,,,,,,,,,,,158,
 MySql.Data.MySqlClient,48,,,,,,,,,,,,48,,,,,,,,,,
 Newtonsoft.Json,,,91,,,,,,,,,,,,,,,,,,,73,18
 ServiceStack,194,,7,27,,,,,75,,,,92,,,,,,,,,7,
 SourceGenerators,,,4,,,,,,,,,,,,,,,,,,,4,
-System,59,44,10429,,8,8,1,,,4,5,,33,2,,3,15,17,3,4,,8460,1969
+System,49,44,9873,,3,3,1,,,4,5,,33,2,,3,15,17,3,4,,7968,1905
 Windows.Security.Cryptography.Core,1,,,,,,,1,,,,,,,,,,,,,,,

csharp/documentation/library-coverage/coverage.rst

@@ -8,7 +8,7 @@ C# framework & library support
 
    Framework / library,Package,Flow sources,Taint & value steps,Sinks (total),`CWE-079` :sub:`Cross-site scripting`
    `ServiceStack <https://servicestack.net/>`_,"``ServiceStack.*``, ``ServiceStack``",,7,194,
-   System,"``System.*``, ``System``",44,10429,59,9
-   Others,"``Amazon.Lambda.APIGatewayEvents``, ``Amazon.Lambda.Core``, ``Dapper``, ``ILCompiler``, ``ILLink.RoslynAnalyzer``, ``ILLink.Shared``, ``ILLink.Tasks``, ``Internal.IL``, ``Internal.Pgo``, ``Internal.TypeSystem``, ``JsonToItemsTaskFactory``, ``Microsoft.Android.Build``, ``Microsoft.Apple.Build``, ``Microsoft.ApplicationBlocks.Data``, ``Microsoft.CSharp``, ``Microsoft.Diagnostics.Tools.Pgo``, ``Microsoft.EntityFrameworkCore``, ``Microsoft.Extensions.Caching.Distributed``, ``Microsoft.Extensions.Caching.Memory``, ``Microsoft.Extensions.Configuration``, ``Microsoft.Extensions.DependencyInjection``, ``Microsoft.Extensions.DependencyModel``, ``Microsoft.Extensions.Diagnostics.Metrics``, ``Microsoft.Extensions.FileProviders``, ``Microsoft.Extensions.FileSystemGlobbing``, ``Microsoft.Extensions.Hosting``, ``Microsoft.Extensions.Http``, ``Microsoft.Extensions.Logging``, ``Microsoft.Extensions.Options``, ``Microsoft.Extensions.Primitives``, ``Microsoft.Interop``, ``Microsoft.NET.Build.Tasks``, ``Microsoft.NET.WebAssembly.Webcil``, ``Microsoft.VisualBasic``, ``Microsoft.WebAssembly.Build.Tasks``, ``Microsoft.Win32``, ``Mono.Linker``, ``MySql.Data.MySqlClient``, ``Newtonsoft.Json``, ``SourceGenerators``, ``Windows.Security.Cryptography.Core``",54,1518,148,
-   Totals,,98,11954,401,9
+   System,"``System.*``, ``System``",44,9873,49,9
+   Others,"``Amazon.Lambda.APIGatewayEvents``, ``Amazon.Lambda.Core``, ``Dapper``, ``ILCompiler``, ``ILLink.RoslynAnalyzer``, ``ILLink.Shared``, ``ILLink.Tasks``, ``Internal.IL``, ``Internal.Pgo``, ``Internal.TypeSystem``, ``JsonToItemsTaskFactory``, ``Microsoft.Android.Build``, ``Microsoft.Apple.Build``, ``Microsoft.ApplicationBlocks.Data``, ``Microsoft.CSharp``, ``Microsoft.Diagnostics.Tools.Pgo``, ``Microsoft.EntityFrameworkCore``, ``Microsoft.Extensions.Caching.Distributed``, ``Microsoft.Extensions.Caching.Memory``, ``Microsoft.Extensions.Configuration``, ``Microsoft.Extensions.DependencyInjection``, ``Microsoft.Extensions.DependencyModel``, ``Microsoft.Extensions.Diagnostics.Metrics``, ``Microsoft.Extensions.FileProviders``, ``Microsoft.Extensions.FileSystemGlobbing``, ``Microsoft.Extensions.Hosting``, ``Microsoft.Extensions.Http``, ``Microsoft.Extensions.Logging``, ``Microsoft.Extensions.Options``, ``Microsoft.Extensions.Primitives``, ``Microsoft.Interop``, ``Microsoft.NET.Build.Tasks``, ``Microsoft.NET.WebAssembly.Webcil``, ``Microsoft.VisualBasic``, ``Microsoft.WebAssembly.Build.Tasks``, ``Microsoft.Win32``, ``Mono.Linker``, ``MySql.Data.MySqlClient``, ``Newtonsoft.Json``, ``SourceGenerators``, ``Windows.Security.Cryptography.Core``",54,1357,148,
+   Totals,,98,11237,391,9
 

csharp/downgrades/BUILD.bazel

@@ -0,0 +1,12 @@
+load("@rules_pkg//:mappings.bzl", "pkg_files", "strip_prefix")
+
+pkg_files(
+    name = "downgrades",
+    srcs = glob(
+        ["**"],
+        exclude = ["BUILD.bazel"],
+    ),
+    prefix = "downgrades",
+    strip_prefix = strip_prefix.from_pkg(),
+    visibility = ["//csharp:__pkg__"],
+)

csharp/extractor/Semmle.Extraction.CSharp.DependencyFetching/BUILD.bazel

@@ -0,0 +1,21 @@
+load(
+    "//misc/bazel:csharp.bzl",
+    "codeql_csharp_library",
+)
+
+codeql_csharp_library(
+    name = "Semmle.Extraction.CSharp.DependencyFetching",
+    srcs = glob([
+        "*.cs",
+        "Properties/*.cs",
+        "SourceGenerators/**/*.cs",
+    ]),
+    allow_unsafe_blocks = True,
+    internals_visible_to = ["Semmle.Extraction.Tests"],
+    nowarn = ["CA1822"],
+    visibility = ["//csharp:__subpackages__"],
+    deps = [
+        "//csharp/extractor/Semmle.Extraction",
+        "//csharp/extractor/Semmle.Util",
+    ],
+)

csharp/extractor/Semmle.Extraction.CSharp.DependencyFetching/NugetExeWrapper.cs

@@ -97,6 +97,15 @@ namespace Semmle.Extraction.CSharp.DependencyFetching
                 return envVarPath;
             }
 
+            try
+            {
+                return DownloadNugetExe(fileProvider.SourceDir.FullName);
+            }
+            catch (Exception exc)
+            {
+                logger.LogInfo($"Download of nuget.exe failed: {exc.Message}");
+            }
+
             var nugetExesInRepo = fileProvider.NugetExes;
             if (nugetExesInRepo.Count > 1)
             {
@@ -119,7 +128,7 @@ namespace Semmle.Extraction.CSharp.DependencyFetching
                 return nugetPath;
             }
 
-            return DownloadNugetExe(fileProvider.SourceDir.FullName);
+            throw new Exception("Could not find or download nuget.exe.");
         }
 
         private string DownloadNugetExe(string sourceDir)
@@ -136,28 +145,20 @@ namespace Semmle.Extraction.CSharp.DependencyFetching
 
             Directory.CreateDirectory(directory);
             logger.LogInfo("Attempting to download nuget.exe");
-            try
-            {
-                FileUtils.DownloadFile(FileUtils.NugetExeUrl, nuget);
-                logger.LogInfo($"Downloaded nuget.exe to {nuget}");
-                return nuget;
-            }
-            catch
-            {
-                // Download failed.
-                throw new FileNotFoundException("Download of nuget.exe failed.");
-            }
+            FileUtils.DownloadFile(FileUtils.NugetExeUrl, nuget);
+            logger.LogInfo($"Downloaded nuget.exe to {nuget}");
+            return nuget;
         }
 
         private bool RunWithMono => !Win32.IsWindows() && !string.IsNullOrEmpty(Path.GetExtension(nugetExe));
 
         /// <summary>
-        /// Restore all files in a specified package.
+        /// Restore all packages in the specified packages.config file.
         /// </summary>
-        /// <param name="package">The package file.</param>
-        private bool TryRestoreNugetPackage(string package)
+        /// <param name="packagesConfig">The packages.config file.</param>
+        private bool TryRestoreNugetPackage(string packagesConfig)
         {
-            logger.LogInfo($"Restoring file {package}...");
+            logger.LogInfo($"Restoring file \"{packagesConfig}\"...");
 
             /* Use nuget.exe to install a package.
              * Note that there is a clutch of NuGet assemblies which could be used to
@@ -169,12 +170,12 @@ namespace Semmle.Extraction.CSharp.DependencyFetching
             if (RunWithMono)
             {
                 exe = "mono";
-                args = $"{nugetExe} install -OutputDirectory {packageDirectory} {package}";
+                args = $"\"{nugetExe}\" install -OutputDirectory \"{packageDirectory}\" \"{packagesConfig}\"";
             }
             else
             {
                 exe = nugetExe!;
-                args = $"install -OutputDirectory {packageDirectory} {package}";
+                args = $"install -OutputDirectory \"{packageDirectory}\" \"{packagesConfig}\"";
             }
 
             var pi = new ProcessStartInfo(exe, args)
@@ -195,7 +196,7 @@ namespace Semmle.Extraction.CSharp.DependencyFetching
             }
             else
             {
-                logger.LogInfo($"Restored file {package}");
+                logger.LogInfo($"Restored file \"{packagesConfig}\"");
                 return true;
             }
         }
@@ -205,7 +206,7 @@ namespace Semmle.Extraction.CSharp.DependencyFetching
         /// </summary>
         public int InstallPackages()
         {
-            return fileProvider.PackagesConfigs.Count(package => TryRestoreNugetPackage(package));
+            return fileProvider.PackagesConfigs.Count(TryRestoreNugetPackage);
         }
 
         private bool HasNoPackageSource()
@@ -239,7 +240,7 @@ namespace Semmle.Extraction.CSharp.DependencyFetching
             if (RunWithMono)
             {
                 exe = "mono";
-                args = $"{nugetExe} {command}";
+                args = $"\"{nugetExe}\" {command}";
             }
             else
             {

csharp/extractor/Semmle.Extraction.CSharp.DependencyStubGenerator/BUILD.bazel

@@ -0,0 +1,18 @@
+load(
+    "//misc/bazel:csharp.bzl",
+    "codeql_csharp_binary",
+)
+
+codeql_csharp_binary(
+    name = "Semmle.Extraction.CSharp.DependencyStubGenerator",
+    srcs = glob([
+        "*.cs",
+        "Properties/*.cs",
+    ]),
+    visibility = ["//csharp:__pkg__"],
+    deps = [
+        "//csharp/extractor/Semmle.Extraction.CSharp.DependencyFetching",
+        "//csharp/extractor/Semmle.Extraction.CSharp.StubGenerator",
+        "//csharp/extractor/Semmle.Util",
+    ],
+)

csharp/extractor/Semmle.Extraction.CSharp.Driver/BUILD.bazel

@@ -0,0 +1,16 @@
+load(
+    "//misc/bazel:csharp.bzl",
+    "codeql_csharp_binary",
+)
+
+codeql_csharp_binary(
+    name = "Semmle.Extraction.CSharp.Driver",
+    srcs = glob([
+        "*.cs",
+        "Properties/*.cs",
+    ]),
+    visibility = ["//csharp:__pkg__"],
+    deps = [
+        "//csharp/extractor/Semmle.Extraction.CSharp",
+    ],
+)

csharp/extractor/Semmle.Extraction.CSharp.Standalone/BUILD.bazel

@@ -0,0 +1,18 @@
+load(
+    "//misc/bazel:csharp.bzl",
+    "codeql_csharp_binary",
+)
+
+codeql_csharp_binary(
+    name = "Semmle.Extraction.CSharp.Standalone",
+    srcs = glob([
+        "*.cs",
+        "Properties/*.cs",
+    ]),
+    visibility = ["//csharp:__subpackages__"],
+    deps = [
+        "//csharp/extractor/Semmle.Extraction.CSharp",
+        "//csharp/extractor/Semmle.Extraction.CSharp.DependencyFetching",
+        "//csharp/extractor/Semmle.Util",
+    ],
+)

csharp/extractor/Semmle.Extraction.CSharp.StubGenerator/BUILD.bazel

@@ -0,0 +1,20 @@
+load(
+    "//misc/bazel:csharp.bzl",
+    "codeql_csharp_library",
+)
+
+codeql_csharp_library(
+    name = "Semmle.Extraction.CSharp.StubGenerator",
+    srcs = glob([
+        "*.cs",
+        "Properties/*.cs",
+    ]),
+    internals_visible_to = ["Semmle.Extraction.Tests"],
+    visibility = ["//csharp:__subpackages__"],
+    deps = [
+        "//csharp/extractor/Semmle.Extraction.CSharp.DependencyFetching",
+        "//csharp/extractor/Semmle.Extraction.CSharp.Util",
+        "//csharp/extractor/Semmle.Util",
+        "@paket.main//microsoft.codeanalysis.csharp",
+    ],
+)

csharp/extractor/Semmle.Extraction.CSharp.Util/BUILD.bazel

@@ -0,0 +1,17 @@
+load(
+    "//misc/bazel:csharp.bzl",
+    "codeql_csharp_library",
+)
+
+codeql_csharp_library(
+    name = "Semmle.Extraction.CSharp.Util",
+    srcs = glob([
+        "Properties/*.cs",
+        "*.cs",
+    ]),
+    visibility = ["//csharp:__subpackages__"],
+    deps = [
+        "//csharp/extractor/Semmle.Util",
+        "@paket.main//microsoft.codeanalysis.csharp",
+    ],
+)

csharp/extractor/Semmle.Extraction.CSharp/BUILD.bazel

@@ -0,0 +1,26 @@
+load(
+    "//misc/bazel:csharp.bzl",
+    "codeql_csharp_library",
+)
+
+codeql_csharp_library(
+    name = "Semmle.Extraction.CSharp",
+    srcs = glob([
+        "Comments/**/*.cs",
+        "Entities/**/*.cs",
+        "Extractor/**/*.cs",
+        "Kinds/**/*.cs",
+        "Populators/**/*.cs",
+        "Properties/**/*.cs",
+        "*.cs",
+    ]),
+    allow_unsafe_blocks = True,
+    visibility = ["//csharp:__subpackages__"],
+    deps = [
+        "//csharp/extractor/Semmle.Extraction",
+        "//csharp/extractor/Semmle.Extraction.CSharp.Util",
+        "//csharp/extractor/Semmle.Util",
+        "@paket.main//microsoft.build",
+        "@paket.main//microsoft.codeanalysis.csharp",
+    ],
+)

csharp/extractor/Semmle.Extraction.Tests/BUILD.bazel

@@ -0,0 +1,22 @@
+load(
+    "//misc/bazel:csharp.bzl",
+    "codeql_xunit_test",
+)
+
+codeql_xunit_test(
+    name = "Semmle.Extraction.Tests",
+    srcs = glob([
+        "*.cs",
+        "Properties/*.cs",
+    ]),
+    deps = [
+        "//csharp/extractor/Semmle.Extraction",
+        "//csharp/extractor/Semmle.Extraction.CSharp",
+        "//csharp/extractor/Semmle.Extraction.CSharp.DependencyFetching",
+        "//csharp/extractor/Semmle.Extraction.CSharp.Standalone:bin/Semmle.Extraction.CSharp.Standalone",
+        "//csharp/extractor/Semmle.Extraction.CSharp.StubGenerator",
+        "//csharp/extractor/Semmle.Util",
+        "@paket.main//microsoft.net.test.sdk",
+        "@paket.main//system.io.filesystem",
+    ],
+)

csharp/extractor/Semmle.Extraction/BUILD.bazel

@@ -0,0 +1,36 @@
+load(
+    "//misc/bazel:csharp.bzl",
+    "codeql_csharp_library",
+)
+
+config_setting(
+    name = "debug_build",
+    values = {
+        "compilation_mode": "dbg",
+    },
+)
+
+codeql_csharp_library(
+    name = "Semmle.Extraction",
+    srcs = glob([
+        "Entities/**/*.cs",
+        "Extractor/**/*.cs",
+        "Properties/*.cs",
+        "*.cs",
+    ]),
+    # enable via -c dbg on the bazel command line/in .bazelrc.local
+    defines = select({
+        ":debug_build": [
+            "TRACE",
+            "DEBUG",
+            "DEBUG_LABELS",
+        ],
+        "//conditions:default": [],
+    }),
+    visibility = ["//csharp:__subpackages__"],
+    deps = [
+        "//csharp/extractor/Semmle.Util",
+        "@paket.main//microsoft.build",
+        "@paket.main//microsoft.codeanalysis",
+    ],
+)

csharp/extractor/Semmle.Extraction/Extractor/Extractor.cs

@@ -1,6 +1,7 @@
 using System.Collections.Generic;
+using System.Reflection;
+using System.IO;
 using Semmle.Util.Logging;
-
 using CompilationInfo = (string key, string value);
 
 namespace Semmle.Extraction
@@ -106,7 +107,20 @@ namespace Semmle.Extraction
 
         public ILogger Logger { get; private set; }
 
-        public static string Version => $"{ThisAssembly.Git.BaseTag} ({ThisAssembly.Git.Sha})";
+        public static string Version
+        {
+            get
+            {
+                // the attribute for the git information are always attached to the entry assembly by our build system
+                var assembly = Assembly.GetEntryAssembly();
+                var versionString = assembly?.GetCustomAttribute<AssemblyInformationalVersionAttribute>();
+                if (versionString == null)
+                {
+                    return "unknown (not built from internal bazel workspace)";
+                }
+                return versionString.InformationalVersion;
+            }
+        }
 
         public PathTransformer PathTransformer { get; }
     }

csharp/extractor/Semmle.Extraction/paket.references

@@ -1,3 +1,2 @@
 Microsoft.Build
 Microsoft.CodeAnalysis
-GitInfo

csharp/extractor/Semmle.Util.Tests/BUILD.bazel

@@ -0,0 +1,17 @@
+load(
+    "//misc/bazel:csharp.bzl",
+    "codeql_xunit_test",
+)
+
+codeql_xunit_test(
+    name = "Semmle.Util.Tests",
+    srcs = glob([
+        "*.cs",
+        "Properties/*.cs",
+    ]),
+    deps = [
+        "//csharp/extractor/Semmle.Util",
+        "@paket.main//microsoft.net.test.sdk",
+        "@paket.main//newtonsoft.json",
+    ],
+)

csharp/extractor/Semmle.Util/BUILD.bazel

@@ -0,0 +1,19 @@
+load(
+    "//misc/bazel:csharp.bzl",
+    "codeql_csharp_library",
+)
+
+codeql_csharp_library(
+    name = "Semmle.Util",
+    srcs = glob([
+        "Logging/**/*.cs",
+        "ToolStatusPage/**/*.cs",
+        "*.cs",
+        "Properties/*.cs",
+    ]),
+    visibility = ["//visibility:public"],
+    deps = [
+        "@paket.main//mono.posix.netstandard",
+        "@paket.main//newtonsoft.json",
+    ],
+)

csharp/extractor/Testrunner/BUILD.bazel

@@ -0,0 +1 @@
+exports_files(["Testrunner.cs"])

csharp/extractor/Testrunner/Testrunner.cs

@@ -0,0 +1,92 @@
+using System.Reflection;
+using System.Threading;
+using Xunit.Runners;
+using System;
+
+
+/// <summary>
+/// A testrunner for xunit tests we can use with bazel.
+/// This file is compiled as part of each test target, due to limitations of the bazel `csharp_test`
+/// target: It cannot pull in the main method from a different target.
+/// Note: We're running the tests in parallel, which currently goes counter to the bazel execution model,
+/// as bazel doesn't expect us to spawm more than one active thread. This for now works fine in practice,
+/// as the tests finish quickly. If this ever becomes a problem, we need to implement the bazel sharding protocol explicitly.
+/// </summary>
+public class Testrunner
+{
+    private static readonly object ConsoleLock = new();
+
+    private static readonly ManualResetEvent Finished = new(false);
+
+    private static int Result = 0;
+
+    private void OnDiscoveryComplete(DiscoveryCompleteInfo info)
+    {
+        lock (ConsoleLock)
+            Console.WriteLine($"Running {info.TestCasesToRun} of {info.TestCasesDiscovered} tests...");
+    }
+
+    private void OnExecutionComplete(ExecutionCompleteInfo info)
+    {
+        lock (ConsoleLock)
+            Console.WriteLine($"Finished: {info.TotalTests} tests in {Math.Round(info.ExecutionTime, 3)}s ({info.TestsFailed} failed, {info.TestsSkipped} skipped)");
+
+        Finished.Set();
+    }
+
+    private void OnTestFailed(TestFailedInfo info)
+    {
+        lock (ConsoleLock)
+        {
+            Console.ForegroundColor = ConsoleColor.Red;
+
+            Console.WriteLine("[FAIL] {0}: {1}", info.TestDisplayName, info.ExceptionMessage);
+            if (info.ExceptionStackTrace != null)
+                Console.WriteLine(info.ExceptionStackTrace);
+
+            Console.ResetColor();
+        }
+
+        Result = 1;
+    }
+
+    private void OnTestSkipped(TestSkippedInfo info)
+    {
+        lock (ConsoleLock)
+        {
+            Console.ForegroundColor = ConsoleColor.Yellow;
+            Console.WriteLine("[SKIP] {0}: {1}", info.TestDisplayName, info.SkipReason);
+            Console.ResetColor();
+        }
+    }
+
+    public int RunTests()
+    {
+        var assembly = Assembly.GetExecutingAssembly();
+        using (var testrunner = AssemblyRunner.WithoutAppDomain(assembly.Location))
+        {
+            testrunner.OnDiscoveryComplete = OnDiscoveryComplete;
+            testrunner.OnExecutionComplete = OnExecutionComplete;
+            testrunner.OnTestFailed = OnTestFailed;
+            testrunner.OnTestSkipped = OnTestSkipped;
+
+            Console.WriteLine("Discovering tests...");
+            testrunner.Start(parallelAlgorithm: null);
+
+            Finished.WaitOne();
+            Finished.Dispose();
+
+            // Wait for assembly runner to finish.
+            // If we try to dispose while runner is executing,
+            // it will throw an error.
+            while (testrunner.Status != AssemblyRunnerStatus.Idle)
+                Thread.Sleep(100);
+        }
+        return Result;
+    }
+
+    public static int Main(string[] args)
+    {
+        return new Testrunner().RunTests();
+    }
+}

csharp/paket.dependencies

@@ -8,6 +8,7 @@ nuget Mono.Posix.NETStandard
 nuget Newtonsoft.Json
 nuget xunit
 nuget xunit.runner.visualstudio
+nuget xunit.runner.utility
 nuget Microsoft.NET.Test.Sdk
 nuget Microsoft.CodeAnalysis.CSharp 4.8.0
 nuget Microsoft.CodeAnalysis 4.8.0
@@ -17,4 +18,3 @@ nuget System.Net.Primitives
 nuget System.Security.Principal
 nuget System.Threading.ThreadPool
 nuget System.IO.FileSystem
-nuget GitInfo 3.3.3

csharp/paket.lock

@@ -3,8 +3,6 @@ STRATEGY: MIN
 RESTRICTION: == net8.0
 NUGET
   remote: https://api.nuget.org/v3/index.json
-    GitInfo (3.3.3)
-      ThisAssembly.Constants (>= 1.4.1)
     Humanizer.Core (2.14.1)
     Microsoft.Bcl.AsyncInterfaces (7.0)
     Microsoft.Build (17.8.3)
@@ -47,7 +45,6 @@ NUGET
       System.IO.Pipelines (>= 7.0)
       System.Threading.Channels (>= 7.0)
     Microsoft.CodeCoverage (17.9)
-    Microsoft.CSharp (4.7)
     Microsoft.NET.StringTools (17.8.3)
     Microsoft.NET.Test.Sdk (17.9)
       Microsoft.CodeCoverage (>= 17.9)
@@ -142,15 +139,11 @@ NUGET
       Microsoft.NETCore.Targets (>= 1.1)
       System.Runtime (>= 4.3)
     System.Threading.Tasks.Dataflow (7.0)
-    System.Threading.Tasks.Extensions (4.5.4)
     System.Threading.ThreadPool (4.3)
       System.Runtime (>= 4.3)
       System.Runtime.Handles (>= 4.3)
     System.Windows.Extensions (7.0)
       System.Drawing.Common (>= 7.0)
-    ThisAssembly.Constants (1.4.1)
-      Microsoft.CSharp (>= 4.7)
-      System.Threading.Tasks.Extensions (>= 4.5.4)
     xunit (2.8)
       xunit.analyzers (>= 1.13)
       xunit.assert (>= 2.8)
@@ -165,4 +158,6 @@ NUGET
       xunit.abstractions (>= 2.0.3)
     xunit.extensibility.execution (2.8)
       xunit.extensibility.core (2.8)
+    xunit.runner.utility (2.8)
+      xunit.abstractions (>= 2.0.3)
     xunit.runner.visualstudio (2.8)

csharp/paket.main.bzl

@@ -0,0 +1,73 @@
+"GENERATED"
+
+load("@rules_dotnet//dotnet:defs.bzl", "nuget_repo")
+
+def main():
+    "main"
+    nuget_repo(
+        name = "paket.main",
+        packages = [
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+            {"name": "xunit.runner.visualstudio", "id": "xunit.runner.visualstudio", "version": "2.8.0", "sha512": "sha512-hEFlhPQ0BVrJkWHtGpKOqtqAvTk1FCPAIS5Z0zs+CMjNAgugpBuuddEa5gB4CzRDjGzms2UjvgzkgbnQXozFpw==", "sources": ["https://api.nuget.org/v3/index.json"], "dependencies": {"net11": [], "net20": [], "net30": [], "net35": [], "net40": [], "net403": [], "net45": [], "net451": [], "net452": [], "net46": [], "net461": [], "net462": ["Microsoft.TestPlatform.ObjectModel"], "net47": ["Microsoft.TestPlatform.ObjectModel"], "net471": ["Microsoft.TestPlatform.ObjectModel"], "net472": ["Microsoft.TestPlatform.ObjectModel"], "net48": ["Microsoft.TestPlatform.ObjectModel"], "net5.0": [], "net6.0": [], "net7.0": [], "net8.0": [], "netcoreapp1.0": [], "netcoreapp1.1": [], "netcoreapp2.0": [], "netcoreapp2.1": [], "netcoreapp2.2": [], "netcoreapp3.0": [], "netcoreapp3.1": [], "netstandard": [], "netstandard1.0": [], "netstandard1.1": [], "netstandard1.2": [], "netstandard1.3": [], "netstandard1.4": [], "netstandard1.5": [], "netstandard1.6": [], "netstandard2.0": [], "netstandard2.1": []}, "targeting_pack_overrides": [], "framework_list": []},
+        ],
+    )

csharp/paket.main_extension.bzl

@@ -0,0 +1,10 @@
+"Generated"
+
+load(":paket.main.bzl", _main = "main")
+
+def _main_impl(_ctx):
+    _main()
+
+main_extension = module_extension(
+    implementation = _main_impl,
+)

csharp/ql/campaigns/Solorigate/lib/CHANGELOG.md

@@ -1,3 +1,7 @@
+## 1.7.17
+
+No user-facing changes.
+
 ## 1.7.16
 
 No user-facing changes.

csharp/ql/campaigns/Solorigate/lib/change-notes/released/1.7.17.md

@@ -0,0 +1,3 @@
+## 1.7.17
+
+No user-facing changes.

csharp/ql/campaigns/Solorigate/lib/codeql-pack.release.yml

@@ -1,2 +1,2 @@
 ---
-lastReleaseVersion: 1.7.16
+lastReleaseVersion: 1.7.17

csharp/ql/campaigns/Solorigate/lib/qlpack.yml

@@ -1,5 +1,5 @@
 name: codeql/csharp-solorigate-all
-version: 1.7.17-dev
+version: 1.7.18-dev
 groups:
   - csharp
   - solorigate

csharp/ql/campaigns/Solorigate/src/CHANGELOG.md

@@ -1,3 +1,7 @@
+## 1.7.17
+
+No user-facing changes.
+
 ## 1.7.16
 
 No user-facing changes.

csharp/ql/campaigns/Solorigate/src/change-notes/released/1.7.17.md

@@ -0,0 +1,3 @@
+## 1.7.17
+
+No user-facing changes.

csharp/ql/campaigns/Solorigate/src/codeql-pack.release.yml

@@ -1,2 +1,2 @@
 ---
-lastReleaseVersion: 1.7.16
+lastReleaseVersion: 1.7.17

csharp/ql/campaigns/Solorigate/src/qlpack.yml

@@ -1,5 +1,5 @@
 name: codeql/csharp-solorigate-queries
-version: 1.7.17-dev
+version: 1.7.18-dev
 groups:
   - csharp
   - solorigate

csharp/ql/integration-tests/legacy

@@ -0,0 +1 @@
+These tests are still run with the legacy test runner

csharp/ql/integration-tests/linux-only/compiler_args/CompilerArgs.expected

@@ -1,9 +1,14 @@
 | 0 | /noconfig |
 | 1 | /unsafe- |
 | 2 | /checked- |
+| 3 | /nowarn:1701,1702,1701,1702 |
 | 4 | /fullpaths |
 | 5 | /nostdlib+ |
+| 6 | /errorreport:prompt |
+| 7 | /warn:8 |
+| 8 | /define:TRACE;DEBUG;NET;NET8_0;NETCOREAPP;NET5_0_OR_GREATER;NET6_0_OR_GREATER;NET7_0_OR_GREATER;NET8_0_OR_GREATER;NETCOREAPP1_0_OR_GREATER;NETCOREAPP1_1_OR_GREATER;NETCOREAPP2_0_OR_GREATER;NETCOREAPP2_1_OR_GREATER;NETCOREAPP2_2_OR_GREATER;NETCOREAPP3_0_OR_GREATER;NETCOREAPP3_1_OR_GREATER |
 | 9 | /highentropyva+ |
+| 10 | /nullable:enable |
 | 11 | /reference:[...]/8.0.1/ref/net8.0/Microsoft.CSharp.dll |
 | 12 | /reference:[...]/8.0.1/ref/net8.0/Microsoft.VisualBasic.Core.dll |
 | 13 | /reference:[...]/8.0.1/ref/net8.0/Microsoft.VisualBasic.dll |
@@ -168,10 +173,24 @@
 | 172 | /reference:[...]/8.0.1/ref/net8.0/System.Xml.XPath.XDocument.dll |
 | 173 | /reference:[...]/8.0.1/ref/net8.0/WindowsBase.dll |
 | 174 | /debug+ |
+| 175 | /debug:portable |
+| 176 | /filealign:512 |
+| 177 | /generatedfilesout:obj/Debug/net8.0//generated |
 | 178 | /optimize- |
+| 179 | /out:obj/Debug/net8.0/test.dll |
+| 180 | /refout:obj/Debug/net8.0/refint/test.dll |
+| 181 | /target:exe |
 | 182 | /warnaserror- |
 | 183 | /utf8output |
 | 184 | /deterministic+ |
+| 185 | /sourcelink:obj/Debug/net8.0/test.sourcelink.json |
+| 186 | /langversion:12.0 |
+| 187 | /embed:Program.cs |
+| 188 | /embed:obj/Debug/net8.0/test.GlobalUsings.g.cs |
+| 189 | /embed:"obj/Debug/net8.0/.NETCoreApp,Version=v8.0.AssemblyAttributes.cs" |
+| 190 | /embed:obj/Debug/net8.0/test.AssemblyInfo.cs |
+| 191 | /analyzerconfig:/home/runner/work/semmle-code/semmle-code/.editorconfig |
+| 192 | /analyzerconfig:obj/Debug/net8.0/test.GeneratedMSBuildEditorConfig.editorconfig |
 | 193 | /analyzerconfig:[...]/8.0.101/Sdks/Microsoft.NET.Sdk/analyzers/build/config/analysislevel_8_default.globalconfig |
 | 194 | /analyzer:[...]/8.0.101/Sdks/Microsoft.NET.Sdk/targets/../analyzers/Microsoft.CodeAnalysis.CSharp.NetAnalyzers.dll |
 | 195 | /analyzer:[...]/8.0.101/Sdks/Microsoft.NET.Sdk/targets/../analyzers/Microsoft.CodeAnalysis.NetAnalyzers.dll |
@@ -185,3 +204,4 @@
 | 203 | obj/Debug/net8.0/test.GlobalUsings.g.cs |
 | 204 | obj/Debug/net8.0/.NETCoreApp,Version=v8.0.AssemblyAttributes.cs |
 | 205 | obj/Debug/net8.0/test.AssemblyInfo.cs |
+| 206 | /warnaserror+:NU1605,SYSLIB0011 |

csharp/ql/integration-tests/linux-only/compiler_args/CompilerArgs.ql

@@ -3,7 +3,8 @@ import semmle.code.csharp.commons.Compilation
 
 bindingset[arg]
 private string normalize(string arg) {
-  not exists(arg.indexOf(":")) and result = arg
+  (not exists(arg.indexOf(":")) or not exists(arg.indexOf("/8.0"))) and
+  result = arg
   or
   exists(int i, int j |
     i = arg.indexOf(":") and

csharp/ql/integration-tests/posix-only/standalone_dependencies_executing_runtime/Assemblies.expected

@@ -193,9 +193,3 @@
 | [...]/WindowsBase.dll |
 | [...]/mscorlib.dll |
 | [...]/netstandard.dll |
-| [...]/zh-Hant/Microsoft.CodeAnalysis.CSharp.Workspaces.resources.dll |
-| [...]/zh-Hant/Microsoft.CodeAnalysis.CSharp.resources.dll |
-| [...]/zh-Hant/Microsoft.CodeAnalysis.VisualBasic.Workspaces.resources.dll |
-| [...]/zh-Hant/Microsoft.CodeAnalysis.VisualBasic.resources.dll |
-| [...]/zh-Hant/Microsoft.CodeAnalysis.Workspaces.resources.dll |
-| [...]/zh-Hant/Microsoft.CodeAnalysis.resources.dll |

csharp/ql/integration-tests/posix-only/standalone_dependencies_nuget with_space/Assemblies.expected

@@ -0,0 +1 @@
+| [...]/Newtonsoft.Json.6.0.4/lib/portable-net45+wp80+win8+wpa81/Newtonsoft.Json.dll |

csharp/ql/integration-tests/posix-only/standalone_dependencies_nuget with_space/Assemblies.ql

@@ -0,0 +1,15 @@
+import csharp
+
+private string getPath(Assembly a) {
+  not a.getCompilation().getOutputAssembly() = a and
+  exists(string s | s = a.getFile().getAbsolutePath() |
+    result =
+      "[...]" +
+        s.substring(s.indexOf("test-db/working/") + "test-db/working/".length() + 16 +
+            "/legacypackages".length(), s.length())
+    // TODO: include all other assemblies from the test results. Initially disable because mono installations were problematic on ARM runners.
+  )
+}
+
+from Assembly a
+select getPath(a)

csharp/ql/integration-tests/posix-only/standalone_dependencies_nuget with_space/Program.cs

@@ -0,0 +1,6 @@
+class Program
+{
+    static void Main(string[] args)
+    {
+    }
+}

csharp/ql/integration-tests/posix-only/standalone_dependencies_nuget with_space/global.json

@@ -0,0 +1,5 @@
+{
+    "sdk": {
+        "version": "8.0.101"
+    }
+}

csharp/ql/integration-tests/posix-only/standalone_dependencies_nuget with_space/packages.config

@@ -0,0 +1,5 @@
+<?xml version="1.0" encoding="utf-8"?>
+<packages>
+  <package id="Newtonsoft.Json" version="6.0.4" targetFramework="net461" />
+  <package id="NUnit.ConsoleRunner" version="3.12.0" />
+</packages>

csharp/ql/integration-tests/posix-only/standalone_dependencies_nuget with_space/skip-on-platform-osx-arm

@@ -0,0 +1 @@
+Skipping the test on the ARM runners, as we're running into trouble with Mono and nuget.

csharp/ql/integration-tests/posix-only/standalone_dependencies_nuget with_space/test.csproj

@@ -0,0 +1,4 @@
+<?xml version="1.0" encoding="utf-8"?>
+<Project ToolsVersion="12.0" DefaultTargets="Build" xmlns="http://schemas.microsoft.com/developer/msbuild/2003">
+  <Import Project="$(MSBuildBinPath)\Microsoft.CSharp.targets" />
+</Project>

csharp/ql/integration-tests/posix-only/standalone_dependencies_nuget with_space/test.py

@@ -0,0 +1,8 @@
+from create_database_utils import *
+import os
+
+# making sure we're not doing any fallback restore:
+os.environ["CODEQL_EXTRACTOR_CSHARP_BUILDLESS_NUGET_FEEDS_CHECK_FALLBACK_TIMEOUT"] = "1"
+os.environ["CODEQL_EXTRACTOR_CSHARP_BUILDLESS_NUGET_FEEDS_CHECK_FALLBACK_LIMIT"] = "1"
+
+run_codeql_database_create([], lang="csharp", extra_args=["--build-mode=none"])

csharp/ql/integration-tests/posix-only/standalone_dependencies_nuget_config_fallback/diagnostics.expected

@@ -13,7 +13,7 @@
   }
 }
 {
-  "markdownMessage": "C# was extracted with build-mode set to 'none'. This means that all C# source in the working directory will be scanned, with build tools, such as Nuget and Dotnet CLIs, only contributing information about external dependencies.", 
+  "markdownMessage": "C# was extracted with build-mode set to 'none'. This means that all C# source in the working directory will be scanned, with build tools, such as Nuget and Dotnet CLIs, only contributing information about external dependencies.",
   "severity": "note",
   "source": {
     "extractorName": "csharp",

csharp/ql/lib/CHANGELOG.md

@@ -1,3 +1,9 @@
+## 1.0.0
+
+### Breaking Changes
+
+* CodeQL package management is now generally available, and all GitHub-produced CodeQL packages have had their version numbers increased to 1.0.0.
+
 ## 0.10.1
 
 No user-facing changes.

csharp/ql/lib/change-notes/released/1.0.0.md

@@ -0,0 +1,5 @@
+## 1.0.0
+
+### Breaking Changes
+
+* CodeQL package management is now generally available, and all GitHub-produced CodeQL packages have had their version numbers increased to 1.0.0.