Add codeql to server container for standalone testing

For full test, we cannot have

       ERROR codeql database analyze failed: error="exec:
       \"codeql\": executable file not found in $PATH" job="{MirvaRequestID:0
       QueryPackId:54674 QueryLanguage:cpp ORepo:{Owner:psycopg Repo:psycopg2}}"

For linux/arm64, use a Dockerfile that:
       - uses ubuntu 22.04 base image
       - adds the 1.17 version of the codeql bundle
       - extracts the bundle
       - adds a recent version of the JRE
       - extracts it
       - sets the CODEQL_JAVA_HOME environment variable to point to the JRE

The instructions are updated

README.md

@@ -15,6 +15,7 @@ These are simple steps using a single container.
 
 2.  build docker image
 
+        cd cmd/server
         docker build -t server-image .
 
 3.  Start container with shared directory
@@ -32,6 +33,8 @@ These are simple steps using a single container.
 ## Using docker-compose
 ### Steps to build and run the server in a multi-container environment set up by docker-compose.
 
+1.  Built the server-image, above
+
 1.  Build server on host
 
         cd ~/work-gh/mrva/mrvacommander/cmd/server/

cmd/server/Dockerfile

@@ -1,14 +1,38 @@
-# Use Ubuntu 22.04 as the base image
+# Use the ubuntu 22.04 base image
-FROM arm64v8/ubuntu:22.04
+FROM ubuntu:22.04
 
-# Set environment variables to non-interactive to avoid prompts during installation
+# Set architecture to arm64
+ARG ARCH=arm64
+ARG AARCH=aarch64
+
+# Set environment variables
 ENV DEBIAN_FRONTEND=noninteractive
+ENV CODEQL_VERSION=codeql-bundle-v2.17.5
+ENV CODEQL_DOWNLOAD_URL=https://github.com/github/codeql-action/releases/download/${CODEQL_VERSION}/codeql-bundle-linux64.tar.gz
+ENV JDK_VERSION=22.0.1
+ENV JDK_DOWNLOAD_URL=https://download.oracle.com/java/21/latest/jdk-${JDK_VERSION}_linux-${AARCH}_bin.tar.gz
+ENV JDK_DOWNLOAD_URL=https://download.java.net/java/GA/jdk${JDK_VERSION}/c7ec1332f7bb44aeba2eb341ae18aca4/8/GPL/openjdk-${JDK_VERSION}_linux-${AARCH}_bin.tar.gz
 
-# Update the package list
+ENV CODEQL_JAVA_HOME=/usr/local/jdk-${JDK_VERSION}
+
+# Install necessary tools
 RUN apt-get update && \
-    apt-get clean 
+    apt-get install -y curl tar && \
+    apt-get clean && \
+    rm -rf /var/lib/apt/lists/*
 
+# Add and extract the CodeQL bundle
+RUN curl -L $CODEQL_DOWNLOAD_URL -o /tmp/${CODEQL_VERSION}.tar.gz && \
+    tar -xzf /tmp/${CODEQL_VERSION}.tar.gz -C /opt && \
+    rm /tmp/${CODEQL_VERSION}.tar.gz
+
+# Add and extract the JDK
+RUN curl -L $JDK_DOWNLOAD_URL -o /tmp/jdk-${JDK_VERSION}.tar.gz && \
+    tar -xzf /tmp/jdk-${JDK_VERSION}.tar.gz -C /usr/local && \
+    rm /tmp/jdk-${JDK_VERSION}.tar.gz
+
+# Set PATH
+ENV PATH=/opt/codeql:"$PATH"
+
+# Prepare host mount point
 RUN mkdir /mrva
-
-# Set the default command
-CMD ["bash"]

docker-compose.yml

@@ -35,11 +35,11 @@ services:
 
 
   server:
-    image: ubuntu:22.04
+    image: server-image
     container_name: server
     environment:
       - MRVA_SERVER_ROOT=/mrva/mrvacommander/cmd/server
-    command: sh -c "apt-get update && apt-get install -y curl && tail -f /dev/null"
+    command: sh -c "tail -f /dev/null"
     ports:
       - "8080:8080" 
     volumes:

pkg/storage/storage.go

@@ -115,6 +115,9 @@ func ArtifactURL(js common.JobSpec, vaid int) (string, error) {
 		slog.Error("Error packaging results:", "error", err)
 		return "", err
 	}
+	// TODO Need url valid in container network and externally
+	// For now, we assume the container port 8080 is port 8080 on user's machine
+	hostname = "localhost"
 	au := fmt.Sprintf("http://%s:8080/download-server/%s", hostname, zfpath)
 	return au, nil
 }