Bump actions/setup-dotnet from 4 to 5

Bumps [actions/setup-dotnet](https://github.com/actions/setup-dotnet) from 4 to 5.
- [Release notes](https://github.com/actions/setup-dotnet/releases)
- [Commits](https://github.com/actions/setup-dotnet/compare/v4...v5)

---
updated-dependencies:
- dependency-name: actions/setup-dotnet
  dependency-version: '5'
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>

.bazelrc

@@ -11,8 +11,6 @@ build --compilation_mode opt
 common --override_module=semmle_code=%workspace%/misc/bazel/semmle_code_stub
 
 build --repo_env=CC=clang --repo_env=CXX=clang++
-# Disable Android SDK auto-detection (we don't use it, and rules_android has Bazel 9 compatibility issues)
-build --repo_env=ANDROID_HOME=
 
 # print test output, like sembuild does.
 # Set to `errors` if this is too verbose.
@@ -36,7 +34,7 @@ common --@rules_dotnet//dotnet/settings:strict_deps=false
 common --@rules_rust//rust/toolchain/channel=nightly
 
 # Reduce this eventually to empty, once we've fixed all our usages of java, and https://github.com/bazel-contrib/rules_go/issues/4193 is fixed
-common --incompatible_autoload_externally="+@rules_cc,+@rules_java,+@rules_shell"
+common --incompatible_autoload_externally="+@rules_java,+@rules_shell"
 
 build --java_language_version=17
 build --tool_java_language_version=17

.bazelversion

@@ -1 +1 @@
-9.0.0
+8.1.1

.gitattributes

@@ -82,6 +82,9 @@
 /csharp/paket.main.bzl linguist-generated=true
 /csharp/paket.main_extension.bzl linguist-generated=true
 
+# ripunzip tool
+/misc/ripunzip/ripunzip-* filter=lfs diff=lfs merge=lfs -text
+
 # swift prebuilt resources
 /swift/third_party/resources/*.zip filter=lfs diff=lfs merge=lfs -text
 /swift/third_party/resources/*.tar.zst filter=lfs diff=lfs merge=lfs -text

.github/copilot-instructions.md

@@ -0,0 +1,4 @@
+When reviewing code:
+* do not review changes in files with `.expected` extension (they are automatically ensured to be correct).
+* in `.ql` and `.qll` files, do not try to review the code itself as you don't understand the programming language
+  well enough to make comments in these languages. You can still check for typos or comment improvements.

.github/dependabot.yml

@@ -40,10 +40,3 @@ updates:
       - dependency-name: "*"
     reviewers:
       - "github/codeql-go"
-
-  - package-ecosystem: bazel
-    directory: "/"
-    schedule:
-      interval: weekly
-    exclude-paths:
-      - "misc/bazel/registry/**"

.github/instructions/expected-files.instructions.md

@@ -1,4 +0,0 @@
----
-applyTo: "**/*.expected"
----
-Ignore these files. These are generated to be correct by running the tests, and should not be edited manually.

.github/instructions/ql-files.instructions.md

@@ -1,6 +0,0 @@
----
-applyTo: "**/*.ql,**/*.qll"
----
-When reviewing these QL files, do not make any comment on the code itself. You don't understand the QL programming language well enough yet. You can only make comments about the following aspects:
-* comments (lines starting with `//` or block comments enclosed in `/* ... */`): you can suggest improvements to the clarity of comments, or point out spelling mistakes
-* typos in identifiers

.github/workflows/build-ripunzip.yml

@@ -0,0 +1,74 @@
+name: Build runzip
+
+on:
+  workflow_dispatch:
+    inputs:
+      ripunzip-version:
+        description: "what reference to checktout from google/runzip"
+        required: false
+        default: v2.0.2
+      openssl-version:
+        description: "what reference to checkout from openssl/openssl for Linux"
+        required: false
+        default: openssl-3.5.0
+
+jobs:
+  build:
+    strategy:
+      fail-fast: false
+      matrix:
+        os: [ubuntu-22.04, macos-13, windows-2022]
+    runs-on: ${{ matrix.os }}
+    steps:
+      - uses: actions/checkout@v5
+        with:
+          repository: google/ripunzip
+          ref: ${{ inputs.ripunzip-version }}
+      # we need to avoid ripunzip dynamically linking into libssl
+      # see https://github.com/sfackler/rust-openssl/issues/183
+      - if: runner.os == 'Linux'
+        name: checkout openssl
+        uses: actions/checkout@v5
+        with:
+          repository: openssl/openssl
+          path: openssl
+          ref: ${{ inputs.openssl-version }}
+      - if: runner.os == 'Linux'
+        name: build and install openssl with fPIC
+        shell: bash
+        working-directory: openssl
+        run: |
+          ./config -fPIC --prefix=$HOME/.local --openssldir=$HOME/.local/ssl
+          make -j $(nproc)
+          make install_sw -j $(nproc)
+      - if: runner.os == 'Linux'
+        name: build (linux)
+        shell: bash
+        run: |
+          env OPENSSL_LIB_DIR=$HOME/.local/lib64 OPENSSL_INCLUDE_DIR=$HOME/.local/include OPENSSL_STATIC=yes cargo build --release
+          mv target/release/ripunzip ripunzip-linux
+      - if: runner.os == 'Windows'
+        name: build (windows)
+        shell: bash
+        run: |
+          cargo build --release
+          mv target/release/ripunzip ripunzip-windows
+      - name: build (macOS)
+        if: runner.os == 'macOS'
+        shell: bash
+        run: |
+          rustup target install x86_64-apple-darwin
+          rustup target install aarch64-apple-darwin
+          cargo build --target x86_64-apple-darwin --release
+          cargo build --target aarch64-apple-darwin --release
+          lipo -create -output ripunzip-macos \
+            -arch x86_64 target/x86_64-apple-darwin/release/ripunzip \
+            -arch arm64 target/aarch64-apple-darwin/release/ripunzip
+      - uses: actions/upload-artifact@v4
+        with:
+          name: ripunzip-${{ runner.os }}
+          path: ripunzip-*
+      - name: Check built binary
+        shell: bash
+        run: |
+          ./ripunzip-* --version

.github/workflows/codeql-analysis.yml

@@ -32,9 +32,9 @@ jobs:
 
     steps:
     - name: Setup dotnet
-      uses: actions/setup-dotnet@v4
+      uses: actions/setup-dotnet@v5
       with:
-        dotnet-version: 10.0.100
+        dotnet-version: 9.0.300
 
     - name: Checkout repository
       uses: actions/checkout@v5

.github/workflows/compile-queries.yml

@@ -0,0 +1,46 @@
+name: "Compile all queries using the latest stable CodeQL CLI"
+
+on:
+  push:
+    branches:  # makes sure the cache gets populated - running on the branches people tend to merge into.
+      - main
+      - "rc/*"
+      - "codeql-cli-*"
+  pull_request:
+    paths:
+      - '**.ql'
+      - '**.qll'
+      - '**/qlpack.yml'
+      - '**.dbscheme'
+
+permissions:
+  contents: read
+
+jobs:
+  compile-queries:
+    if: github.repository_owner == 'github'
+    runs-on: ubuntu-latest-xl
+
+    steps:
+      - uses: actions/checkout@v5
+      - name: Setup CodeQL
+        uses: ./.github/actions/fetch-codeql
+        with:
+          channel: 'release'
+      - name: Cache compilation cache
+        id: query-cache
+        uses: ./.github/actions/cache-query-compilation
+        with: 
+          key: all-queries
+      - name: check formatting
+        run: find shared */ql -type f \( -name "*.qll" -o -name "*.ql" \) -print0 | xargs -0 -n 3000 -P 10 codeql query format -q --check-only
+      - name: compile queries - check-only
+        # run with --check-only if running in a PR (github.sha != main)
+        if : ${{ github.event_name == 'pull_request' }}
+        shell: bash
+        run: codeql query compile -q -j0 */ql/{src,examples} --keep-going --warnings=error --check-only --compilation-cache "${{ steps.query-cache.outputs.cache-dir }}" --compilation-cache-size=500 --ram=56000
+      - name: compile queries - full
+        # do full compile if running on main - this populates the cache
+        if : ${{ github.event_name != 'pull_request' }}
+        shell: bash
+        run: codeql query compile -q -j0 */ql/{src,examples} --keep-going --warnings=error --compilation-cache "${{ steps.query-cache.outputs.cache-dir }}" --compilation-cache-size=500 --ram=56000

.github/workflows/csharp-qltest.yml

@@ -41,16 +41,16 @@ jobs:
     steps:
       - uses: actions/checkout@v5
       - name: Setup dotnet
-        uses: actions/setup-dotnet@v4
+        uses: actions/setup-dotnet@v5
         with:
-          dotnet-version: 10.0.100
+          dotnet-version: 9.0.300
       - name: Extractor unit tests
         run: |
           dotnet tool restore
-          dotnet test -p:RuntimeFrameworkVersion=10.0.0 extractor/Semmle.Util.Tests
-          dotnet test -p:RuntimeFrameworkVersion=10.0.0 extractor/Semmle.Extraction.Tests
-          dotnet test -p:RuntimeFrameworkVersion=10.0.0 autobuilder/Semmle.Autobuild.CSharp.Tests
-          dotnet test -p:RuntimeFrameworkVersion=10.0.0 autobuilder/Semmle.Autobuild.Cpp.Tests
+          dotnet test -p:RuntimeFrameworkVersion=9.0.5 extractor/Semmle.Util.Tests
+          dotnet test -p:RuntimeFrameworkVersion=9.0.5 extractor/Semmle.Extraction.Tests
+          dotnet test -p:RuntimeFrameworkVersion=9.0.5 autobuilder/Semmle.Autobuild.CSharp.Tests
+          dotnet test -p:RuntimeFrameworkVersion=9.0.5 autobuilder/Semmle.Autobuild.Cpp.Tests
         shell: bash
   stubgentest:
     runs-on: ubuntu-latest

.github/workflows/mad_modelDiff.yml

@@ -70,7 +70,7 @@ jobs:
             SHORTNAME=`basename $DATABASE`
             python misc/scripts/models-as-data/generate_mad.py --language java --with-summaries --with-sinks $DATABASE $SHORTNAME/$QL_VARIANT
             mkdir -p $MODELS/$SHORTNAME
-            mv java/ql/lib/ext/generated/modelgenerator/$SHORTNAME/$QL_VARIANT $MODELS/$SHORTNAME
+            mv java/ql/lib/ext/generated/$SHORTNAME/$QL_VARIANT $MODELS/$SHORTNAME
             cd ..
           }
 

.github/workflows/python-tooling.yml

@@ -5,7 +5,7 @@ on:
     paths:
       - "misc/bazel/**"
       - "misc/codegen/**"
-      - "misc/scripts/models-as-data/*.py"
+      - "misc/scripts/models-as-data/bulk_generate_mad.py"
       - "*.bazel*"
       - .github/workflows/codegen.yml
       - .pre-commit-config.yaml

.github/workflows/ql-for-ql-build.yml

@@ -27,7 +27,6 @@ jobs:
         uses: github/codeql-action/init@main
         with:
           languages: javascript # does not matter
-          tools: nightly
       - uses: ./.github/actions/os-version
         id: os_version
       ### Build the extractor ###

.github/workflows/ql-for-ql-tests.yml

@@ -30,7 +30,6 @@ jobs:
         uses: github/codeql-action/init@main
         with:
           languages: javascript # does not matter
-          tools: nightly
       - uses: ./.github/actions/os-version
         id: os_version
       - uses: actions/cache@v3
@@ -76,7 +75,6 @@ jobs:
         uses: github/codeql-action/init@main
         with:
           languages: javascript # does not matter
-          tools: nightly
       - uses: ./.github/actions/os-version
         id: os_version
       - uses: actions/cache@v3

.github/workflows/ruby-build.yml

@@ -0,0 +1,236 @@
+name: "Ruby: Build"
+
+on:
+  push:
+    paths:
+      - "ruby/**"
+      - .github/workflows/ruby-build.yml
+      - .github/actions/fetch-codeql/action.yml
+      - codeql-workspace.yml
+      - "shared/tree-sitter-extractor/**"
+    branches:
+      - main
+      - "rc/*"
+  pull_request:
+    paths:
+      - "ruby/**"
+      - .github/workflows/ruby-build.yml
+      - .github/actions/fetch-codeql/action.yml
+      - codeql-workspace.yml
+      - "shared/tree-sitter-extractor/**"
+    branches:
+      - main
+      - "rc/*"
+  workflow_dispatch:
+    inputs:
+      tag:
+        description: "Version tag to create"
+        required: false
+
+env:
+  CARGO_TERM_COLOR: always
+
+defaults:
+  run:
+    working-directory: ruby
+
+permissions:
+  contents: read
+
+jobs:
+  build:
+    strategy:
+      fail-fast: false
+      matrix:
+        os: [ubuntu-latest, macos-latest, windows-latest]
+
+    runs-on: ${{ matrix.os }}
+
+    steps:
+      - uses: actions/checkout@v5
+      - name: Install GNU tar
+        if: runner.os == 'macOS'
+        run: |
+          brew install gnu-tar
+          echo "/usr/local/opt/gnu-tar/libexec/gnubin" >> $GITHUB_PATH
+      - name: Prepare Windows
+        if: runner.os == 'Windows'
+        shell: powershell
+        run: |
+          git config --global core.longpaths true
+      - uses: ./.github/actions/os-version
+        id: os_version
+      - name: Cache entire extractor
+        uses: actions/cache@v3
+        id: cache-extractor
+        with:
+          path: |
+            target/release/codeql-extractor-ruby
+            target/release/codeql-extractor-ruby.exe
+            ruby/extractor/ql/lib/codeql/ruby/ast/internal/TreeSitter.qll
+          key: ${{ runner.os }}-${{ steps.os_version.outputs.version }}-ruby-extractor-${{ hashFiles('ruby/extractor/rust-toolchain.toml', 'ruby/extractor/Cargo.lock') }}-${{ hashFiles('shared/tree-sitter-extractor') }}-${{ hashFiles('ruby/extractor/**/*.rs') }}
+      - uses: actions/cache@v3
+        if: steps.cache-extractor.outputs.cache-hit != 'true'
+        with:
+          path: |
+            ~/.cargo/registry
+            ~/.cargo/git
+            target
+          key: ${{ runner.os }}-${{ steps.os_version.outputs.version }}-ruby-rust-cargo-${{ hashFiles('ruby/extractor/rust-toolchain.toml', 'ruby/extractor/**/Cargo.lock') }}
+      - name: Check formatting
+        if: steps.cache-extractor.outputs.cache-hit != 'true'
+        run: cd extractor && cargo fmt -- --check
+      - name: Build
+        if: steps.cache-extractor.outputs.cache-hit != 'true'
+        run: cd extractor && cargo build --verbose
+      - name: Run tests
+        if: steps.cache-extractor.outputs.cache-hit != 'true'
+        run: cd extractor && cargo test --verbose
+      - name: Release build
+        if: steps.cache-extractor.outputs.cache-hit != 'true'
+        run: cd extractor && cargo build --release
+      - name: Generate dbscheme
+        if: ${{ matrix.os == 'ubuntu-latest' && steps.cache-extractor.outputs.cache-hit != 'true'}}
+        run: ../target/release/codeql-extractor-ruby generate --dbscheme ql/lib/ruby.dbscheme --library ql/lib/codeql/ruby/ast/internal/TreeSitter.qll
+      - uses: actions/upload-artifact@v4
+        if: ${{ matrix.os == 'ubuntu-latest' }}
+        with:
+          name: ruby.dbscheme
+          path: ruby/ql/lib/ruby.dbscheme
+      - uses: actions/upload-artifact@v4
+        if: ${{ matrix.os == 'ubuntu-latest' }}
+        with:
+          name: TreeSitter.qll
+          path: ruby/ql/lib/codeql/ruby/ast/internal/TreeSitter.qll
+      - uses: actions/upload-artifact@v4
+        with:
+          name: extractor-${{ matrix.os }}
+          path: |
+            target/release/codeql-extractor-ruby
+            target/release/codeql-extractor-ruby.exe
+          retention-days: 1
+  compile-queries:
+    if: github.repository_owner == 'github'
+    runs-on: ubuntu-latest-xl
+    steps:
+      - uses: actions/checkout@v5
+      - name: Fetch CodeQL
+        uses: ./.github/actions/fetch-codeql
+      - name: Cache compilation cache
+        id: query-cache
+        uses: ./.github/actions/cache-query-compilation
+        with:
+          key: ruby-build
+      - name: Build Query Pack
+        run: |
+          PACKS=${{ runner.temp }}/query-packs
+          rm -rf $PACKS
+          codeql pack create ../misc/suite-helpers --output "$PACKS"
+          codeql pack create ../shared/regex --output "$PACKS"
+          codeql pack create ../shared/ssa --output "$PACKS"
+          codeql pack create ../shared/tutorial --output "$PACKS"
+          codeql pack create ql/lib --output "$PACKS"
+          codeql pack create -j0 ql/src --output "$PACKS" --compilation-cache "${{ steps.query-cache.outputs.cache-dir }}"
+          PACK_FOLDER=$(readlink -f "$PACKS"/codeql/ruby-queries/*)
+          codeql generate query-help --format=sarifv2.1.0 --output="${PACK_FOLDER}/rules.sarif" ql/src
+          (cd ql/src; find queries \( -name '*.qhelp' -o -name '*.rb' -o -name '*.erb' \) -exec bash -c 'mkdir -p "'"${PACK_FOLDER}"'/$(dirname "{}")"' \; -exec cp "{}" "${PACK_FOLDER}/{}" \;)
+      - uses: actions/upload-artifact@v4
+        with:
+          name: codeql-ruby-queries
+          path: |
+            ${{ runner.temp }}/query-packs/*
+          retention-days: 1
+          include-hidden-files: true
+
+  package:
+    runs-on: ubuntu-latest
+    needs: [build, compile-queries]
+    steps:
+      - uses: actions/checkout@v5
+      - uses: actions/download-artifact@v4
+        with:
+          name: ruby.dbscheme
+          path: ruby/ruby
+      - uses: actions/download-artifact@v4
+        with:
+          name: extractor-ubuntu-latest
+          path: ruby/linux64
+      - uses: actions/download-artifact@v4
+        with:
+          name: extractor-windows-latest
+          path: ruby/win64
+      - uses: actions/download-artifact@v4
+        with:
+          name: extractor-macos-latest
+          path: ruby/osx64
+      - run: |
+          mkdir -p ruby
+          cp -r codeql-extractor.yml tools ql/lib/ruby.dbscheme.stats ruby/
+          mkdir -p ruby/tools/{linux64,osx64,win64}
+          cp linux64/codeql-extractor-ruby ruby/tools/linux64/extractor
+          cp osx64/codeql-extractor-ruby ruby/tools/osx64/extractor
+          cp win64/codeql-extractor-ruby.exe ruby/tools/win64/extractor.exe
+          chmod +x ruby/tools/{linux64,osx64}/extractor
+          zip -rq codeql-ruby.zip ruby
+      - uses: actions/upload-artifact@v4
+        with:
+          name: codeql-ruby-pack
+          path: ruby/codeql-ruby.zip
+          retention-days: 1
+          include-hidden-files: true
+      - uses: actions/download-artifact@v4
+        with:
+          name: codeql-ruby-queries
+          path: ruby/qlpacks
+      - run: |
+          echo '{
+            "provide": [
+            "ruby/codeql-extractor.yml",
+            "qlpacks/*/*/*/qlpack.yml"
+            ]
+          }' > .codeqlmanifest.json
+          zip -rq codeql-ruby-bundle.zip .codeqlmanifest.json ruby qlpacks
+      - uses: actions/upload-artifact@v4
+        with:
+          name: codeql-ruby-bundle
+          path: ruby/codeql-ruby-bundle.zip
+          retention-days: 1
+          include-hidden-files: true
+
+  test:
+    defaults:
+      run:
+        working-directory: ${{ github.workspace }}
+    strategy:
+      fail-fast: false
+      matrix:
+        os: [ubuntu-latest, macos-latest, windows-latest]
+
+    runs-on: ${{ matrix.os }}
+    needs: [package]
+    steps:
+      - uses: actions/checkout@v5
+      - name: Fetch CodeQL
+        uses: ./.github/actions/fetch-codeql
+
+      - name: Download Ruby bundle
+        uses: actions/download-artifact@v4
+        with:
+          name: codeql-ruby-bundle
+          path: ${{ runner.temp }}
+      - name: Unzip Ruby bundle
+        shell: bash
+        run: unzip -q -d "${{ runner.temp }}/ruby-bundle" "${{ runner.temp }}/codeql-ruby-bundle.zip"
+
+      - name: Run QL test
+        shell: bash
+        run: |
+          codeql test run --search-path "${{ runner.temp }}/ruby-bundle" --additional-packs "${{ runner.temp }}/ruby-bundle" ruby/ql/test/library-tests/ast/constants/
+      - name: Create database
+        shell: bash
+        run: |
+          codeql database create --search-path "${{ runner.temp }}/ruby-bundle" --language ruby --source-root ruby/ql/test/library-tests/ast/constants/ ../database
+      - name: Analyze database
+        shell: bash
+        run: |
+          codeql database analyze --search-path "${{ runner.temp }}/ruby-bundle" --format=sarifv2.1.0 --output=out.sarif ../database ruby-code-scanning.qls

.github/workflows/ruby-dataset-measure.yml

@@ -0,0 +1,75 @@
+name: "Ruby: Collect database stats"
+
+on:
+  push:
+    branches:
+      - main
+      - "rc/*"
+    paths:
+      - ruby/ql/lib/ruby.dbscheme
+      - .github/workflows/ruby-dataset-measure.yml
+  pull_request:
+    branches:
+      - main
+      - "rc/*"
+    paths:
+      - ruby/ql/lib/ruby.dbscheme
+      - .github/workflows/ruby-dataset-measure.yml
+  workflow_dispatch:
+
+permissions:
+  contents: read
+
+jobs:
+  measure:
+    env:
+      CODEQL_THREADS: 4 # TODO: remove this once it's set by the CLI
+    strategy:
+      fail-fast: false
+      matrix:
+        repo: [rails/rails, discourse/discourse, spree/spree, ruby/ruby]
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v5
+
+      - uses: ./.github/actions/fetch-codeql
+
+      - uses: ./ruby/actions/create-extractor-pack
+
+      - name: Checkout ${{ matrix.repo }}
+        uses: actions/checkout@v5
+        with:
+          repository: ${{ matrix.repo }}
+          path: ${{ github.workspace }}/repo
+      - name: Create database
+        run: |
+          codeql database create \
+            --search-path "${{ github.workspace }}" \
+            --threads 4 \
+            --language ruby --source-root "${{ github.workspace }}/repo" \
+            "${{ runner.temp }}/database"
+      - name: Measure database
+        run: |
+          mkdir -p "stats/${{ matrix.repo }}"
+          codeql dataset measure --threads 4 --output "stats/${{ matrix.repo }}/stats.xml" "${{ runner.temp }}/database/db-ruby"
+      - uses: actions/upload-artifact@v4
+        with:
+          name: measurements-${{ hashFiles('stats/**') }}
+          path: stats
+          retention-days: 1
+
+  merge:
+    runs-on: ubuntu-latest
+    needs: measure
+    steps:
+      - uses: actions/checkout@v5
+      - uses: actions/download-artifact@v4
+        with:
+          path: stats
+      - run: |
+          python -m pip install --user lxml
+          find stats -name 'stats.xml' | sort | xargs python ruby/scripts/merge_stats.py --output ruby/ql/lib/ruby.dbscheme.stats --normalise ruby_tokeninfo
+      - uses: actions/upload-artifact@v4
+        with:
+          name: ruby.dbscheme.stats
+          path: ruby/ql/lib/ruby.dbscheme.stats

.github/workflows/ruby-qltest-rtjo.yml

@@ -0,0 +1,40 @@
+name: "Ruby: Run RTJO Language Tests"
+
+on:
+  pull_request:
+    types:
+      - opened
+      - synchronize
+      - reopened
+      - labeled
+
+env:
+  CARGO_TERM_COLOR: always
+
+defaults:
+  run:
+    working-directory: ruby
+
+permissions:
+  contents: read
+
+jobs:
+  qltest-rtjo:
+    if: "github.repository_owner == 'github' && github.event.label.name == 'Run: RTJO Language Tests'"
+    runs-on: ubuntu-latest-xl
+    strategy:
+      fail-fast: false
+    steps:
+      - uses: actions/checkout@v5
+      - uses: ./.github/actions/fetch-codeql
+      - uses: ./ruby/actions/create-extractor-pack
+      - name: Cache compilation cache
+        id: query-cache
+        uses: ./.github/actions/cache-query-compilation
+        with:
+          key: ruby-qltest
+      - name: Run QL tests
+        run: |
+          codeql test run --dynamic-join-order-mode=all --threads=0 --ram 50000 --search-path "${{ github.workspace }}" --check-databases --check-diff-informed --check-undefined-labels --check-unused-labels --check-repeated-labels --check-redefined-labels --check-use-before-definition --consistency-queries ql/consistency-queries ql/test --compilation-cache "${{ steps.query-cache.outputs.cache-dir }}"
+        env:
+          GITHUB_TOKEN: ${{ github.token }}

.github/workflows/ruby-qltest.yml

@@ -0,0 +1,73 @@
+name: "Ruby: Run QL Tests"
+
+on:
+  push:
+    paths:
+      - "ruby/**"
+      - "shared/**"
+      - .github/workflows/ruby-build.yml
+      - .github/actions/fetch-codeql/action.yml
+      - codeql-workspace.yml
+    branches:
+      - main
+      - "rc/*"
+  pull_request:
+    paths:
+      - "ruby/**"
+      - "shared/**"
+      - .github/workflows/ruby-qltest.yml
+      - .github/actions/fetch-codeql/action.yml
+      - codeql-workspace.yml
+    branches:
+      - main
+      - "rc/*"
+
+env:
+  CARGO_TERM_COLOR: always
+
+defaults:
+  run:
+    working-directory: ruby
+
+permissions:
+  contents: read
+
+jobs:
+  qlupgrade:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v5
+      - uses: ./.github/actions/fetch-codeql
+      - name: Check DB upgrade scripts
+        run: |
+          echo >empty.trap
+          codeql dataset import -S ql/lib/upgrades/initial/ruby.dbscheme testdb empty.trap
+          codeql dataset upgrade testdb --additional-packs ql/lib
+          diff -q testdb/ruby.dbscheme ql/lib/ruby.dbscheme
+      - name: Check DB downgrade scripts
+        run: |
+          echo >empty.trap
+          rm -rf testdb; codeql dataset import -S ql/lib/ruby.dbscheme testdb empty.trap
+          codeql resolve upgrades --format=lines --allow-downgrades --additional-packs downgrades \
+           --dbscheme=ql/lib/ruby.dbscheme --target-dbscheme=downgrades/initial/ruby.dbscheme |
+           xargs codeql execute upgrades testdb
+          diff -q testdb/ruby.dbscheme downgrades/initial/ruby.dbscheme
+  qltest:
+    if: github.repository_owner == 'github'
+    runs-on: ubuntu-latest-xl
+    strategy:
+      fail-fast: false
+    steps:
+      - uses: actions/checkout@v5
+      - uses: ./.github/actions/fetch-codeql
+      - uses: ./ruby/actions/create-extractor-pack
+      - name: Cache compilation cache
+        id: query-cache
+        uses: ./.github/actions/cache-query-compilation
+        with:
+          key: ruby-qltest
+      - name: Run QL tests
+        run: |
+          codeql test run --threads=0 --ram 50000 --search-path "${{ github.workspace }}" --check-databases --check-diff-informed --check-undefined-labels --check-unused-labels --check-repeated-labels --check-redefined-labels --check-use-before-definition --consistency-queries ql/consistency-queries ql/test --compilation-cache "${{ steps.query-cache.outputs.cache-dir }}"
+        env:
+          GITHUB_TOKEN: ${{ github.token }}

.gitignore

@@ -76,6 +76,3 @@ node_modules/
 # some upgrade/downgrade checks create these files
 **/upgrades/*/*.dbscheme.stats
 **/downgrades/*/*.dbscheme.stats
-
-# Mergetool files
-*.orig

.pre-commit-config.yaml

@@ -7,9 +7,9 @@ repos:
     rev: v3.2.0
     hooks:
       - id: trailing-whitespace
-        exclude: /test([^/]*)/.*$(?<!\.qlref)|.*\.patch$|.*\.qll?$
+        exclude: /test/.*$(?<!\.qlref)|.*\.patch$|.*\.qll?$
       - id: end-of-file-fixer
-        exclude: Cargo.lock$|/test([^/]*)/.*$(?<!\.qlref)|.*\.patch$|.*\.qll?$
+        exclude: Cargo.lock$|/test/.*$(?<!\.qlref)|.*\.patch$|.*\.qll?$
 
   - repo: https://github.com/pre-commit/mirrors-clang-format
     rev: v17.0.6

CODEOWNERS

@@ -1,33 +1,17 @@
-# Catch-all for anything which isn't matched by a line lower down
-* @github/code-scanning-alert-coverage
-
-# CodeQL language libraries
 /actions/ @github/codeql-dynamic
 /cpp/ @github/codeql-c-analysis
 /csharp/ @github/codeql-csharp
-/csharp/autobuilder/Semmle.Autobuild.Cpp @github/codeql-c-extractor @github/code-scanning-language-coverage
-/csharp/autobuilder/Semmle.Autobuild.Cpp.Tests @github/codeql-c-extractor @github/code-scanning-language-coverage
+/csharp/autobuilder/Semmle.Autobuild.Cpp @github/codeql-c-extractor
+/csharp/autobuilder/Semmle.Autobuild.Cpp.Tests @github/codeql-c-extractor
 /go/ @github/codeql-go
-/go/codeql-tools/ @github/codeql-go @github/code-scanning-language-coverage
-/go/downgrades/ @github/codeql-go @github/code-scanning-language-coverage
-/go/extractor/ @github/codeql-go @github/code-scanning-language-coverage
-/go/extractor-smoke-test/ @github/codeql-go @github/code-scanning-language-coverage
-/go/ql/test/extractor-tests/ @github/codeql-go @github/code-scanning-language-coverage
 /java/ @github/codeql-java
 /javascript/ @github/codeql-javascript
-/javascript/extractor/ @github/codeql-javascript @github/code-scanning-language-coverage
 /python/ @github/codeql-python
-/python/extractor/ @github/codeql-python @github/code-scanning-language-coverage
-/ql/ @github/codeql-ql-for-ql-reviewers
 /ruby/ @github/codeql-ruby
-/ruby/extractor/ @github/codeql-ruby @github/code-scanning-language-coverage
 /rust/ @github/codeql-rust
-/rust/extractor/ @github/codeql-rust @github/code-scanning-language-coverage
-/shared/ @github/codeql-shared-libraries-reviewers
 /swift/ @github/codeql-swift
-/swift/extractor/ @github/codeql-swift @github/code-scanning-language-coverage
 /misc/codegen/ @github/codeql-swift
-/java/kotlin-extractor/ @github/codeql-kotlin @github/code-scanning-language-coverage
+/java/kotlin-extractor/ @github/codeql-kotlin
 /java/ql/test-kotlin1/ @github/codeql-kotlin
 /java/ql/test-kotlin2/ @github/codeql-kotlin
 
@@ -41,6 +25,9 @@
 /docs/codeql/ql-language-reference/ @github/codeql-frontend-reviewers
 /docs/query-*-style-guide.md @github/codeql-analysis-reviewers
 
+# QL for QL reviewers
+/ql/ @github/codeql-ql-for-ql-reviewers
+
 # Bazel (excluding BUILD.bazel files)
 MODULE.bazel @github/codeql-ci-reviewers
 .bazelversion @github/codeql-ci-reviewers

Cargo.toml

@@ -4,12 +4,10 @@
 resolver = "2"
 members = [
     "shared/tree-sitter-extractor",
-    "shared/yeast",
-    "shared/yeast-macros",
     "ruby/extractor",
-    "unified/extractor",
     "rust/extractor",
     "rust/extractor/macros",
     "rust/ast-generator",
     "rust/autobuild",
 ]
+exclude = ["mad-generation-build"]

MODULE.bazel

@@ -15,23 +15,21 @@ local_path_override(
 # see https://registry.bazel.build/ for a list of available packages
 
 bazel_dep(name = "platforms", version = "1.0.0")
-bazel_dep(name = "rules_cc", version = "0.2.17")
-bazel_dep(name = "rules_go", version = "0.60.0")
-bazel_dep(name = "rules_java", version = "9.6.1")
-bazel_dep(name = "rules_pkg", version = "1.2.0")
-bazel_dep(name = "rules_nodejs", version = "6.7.3")
-bazel_dep(name = "rules_python", version = "1.9.0")
-bazel_dep(name = "rules_shell", version = "0.7.1")
-bazel_dep(name = "bazel_skylib", version = "1.9.0")
-bazel_dep(name = "abseil-cpp", version = "20260107.1", repo_name = "absl")
+bazel_dep(name = "rules_go", version = "0.56.1")
+bazel_dep(name = "rules_pkg", version = "1.0.1")
+bazel_dep(name = "rules_nodejs", version = "6.2.0-codeql.1")
+bazel_dep(name = "rules_python", version = "0.40.0")
+bazel_dep(name = "rules_shell", version = "0.3.0")
+bazel_dep(name = "bazel_skylib", version = "1.7.1")
+bazel_dep(name = "abseil-cpp", version = "20240116.1", repo_name = "absl")
 bazel_dep(name = "nlohmann_json", version = "3.11.3", repo_name = "json")
-bazel_dep(name = "fmt", version = "12.1.0-codeql.1")
-bazel_dep(name = "rules_kotlin", version = "2.2.2-codeql.1")
-bazel_dep(name = "gazelle", version = "0.50.0")
-bazel_dep(name = "rules_dotnet", version = "0.21.5-codeql.1")
-bazel_dep(name = "googletest", version = "1.17.0.bcr.2")
-bazel_dep(name = "rules_rust", version = "0.69.0")
-bazel_dep(name = "zstd", version = "1.5.7.bcr.1")
+bazel_dep(name = "fmt", version = "10.0.0")
+bazel_dep(name = "rules_kotlin", version = "2.1.3-codeql.1")
+bazel_dep(name = "gazelle", version = "0.40.0")
+bazel_dep(name = "rules_dotnet", version = "0.19.2-codeql.1")
+bazel_dep(name = "googletest", version = "1.14.0.bcr.1")
+bazel_dep(name = "rules_rust", version = "0.63.0")
+bazel_dep(name = "zstd", version = "1.5.5.bcr.1")
 
 bazel_dep(name = "buildifier_prebuilt", version = "6.4.0", dev_dependency = True)
 
@@ -43,7 +41,7 @@ RUST_EDITION = "2024"
 # a nightly toolchain is required to enable experimental_use_cc_common_link, which we require internally
 # we prefer to run the same version as internally, even if experimental_use_cc_common_link is not really
 # required in this repo
-RUST_VERSION = "nightly/2026-01-22"
+RUST_VERSION = "nightly/2025-08-01"
 
 rust = use_extension("@rules_rust//rust:extensions.bzl", "rust")
 rust.toolchain(
@@ -55,26 +53,26 @@ rust.toolchain(
     ],
     # generated by buildutils-internal/scripts/fill-rust-sha256s.py (internal repo)
     sha256s = {
-        "2026-01-22/rustc-nightly-x86_64-unknown-linux-gnu.tar.xz": "88db619323cc1321630d124efa51ed02fabc5e020f08cfa0eda2c0ac1afbe69a",
-        "2026-01-22/rustc-nightly-x86_64-apple-darwin.tar.xz": "08484da3fa38db56f93629aeabdc0ae9ff8ed9704c0792d35259cbc849b3f54c",
-        "2026-01-22/rustc-nightly-aarch64-apple-darwin.tar.xz": "a39c0b21b7058e364ea1bd43144e42e4bf1efade036b2e82455f2afce194ee81",
-        "2026-01-22/rustc-nightly-x86_64-pc-windows-msvc.tar.xz": "d00248ee9850dbb6932b2578e32ff74fc7c429854c1aa071066ca31b65385a3b",
-        "2026-01-22/clippy-nightly-x86_64-unknown-linux-gnu.tar.xz": "70656a0ce994ffff16d5a35a7b170a0acd41e9bb54a589c96ed45bf97b094a4d",
-        "2026-01-22/clippy-nightly-x86_64-apple-darwin.tar.xz": "fe242519fa961522734733009705aec3c2d9a20cc57291f2aa614e5e6262c88f",
-        "2026-01-22/clippy-nightly-aarch64-apple-darwin.tar.xz": "38bb226363ec97c9722edf966cd58774a683e19fd2ff2a6030094445d51e06f9",
-        "2026-01-22/clippy-nightly-x86_64-pc-windows-msvc.tar.xz": "6da9b4470beea67abfebf046f141eee0d2a8db7c7a9e4e2294478734fd477228",
-        "2026-01-22/cargo-nightly-x86_64-unknown-linux-gnu.tar.xz": "99004e9d10c43a01499642f53bb3184d41137a95d65bfb217098840a9e79e892",
-        "2026-01-22/cargo-nightly-x86_64-apple-darwin.tar.xz": "6e021394cf8d8400ac6cfdfcef24e4d74f988e91eb8028b36de3a64ce3502990",
-        "2026-01-22/cargo-nightly-aarch64-apple-darwin.tar.xz": "4b2494cb69ab64132cddbc411a38ea9f1105e54d6f986e43168d54f79510c673",
-        "2026-01-22/cargo-nightly-x86_64-pc-windows-msvc.tar.xz": "c36613cf57407212d10d37b76e49a60ff42336e953cdff9e177283f530a83fc1",
-        "2026-01-22/llvm-tools-nightly-x86_64-unknown-linux-gnu.tar.xz": "0b123c5027dbd833aae6845ffe9bd07d309bf798746a7176aadaea68fbcbd05d",
-        "2026-01-22/llvm-tools-nightly-x86_64-apple-darwin.tar.xz": "a47864491ad5619158c950ab7570fb6e487d5117338585c27334d45824b406d8",
-        "2026-01-22/llvm-tools-nightly-aarch64-apple-darwin.tar.xz": "db9bc826d6e2e7e914505d50157682e516ceb90357e83d77abddc32c2d962f41",
-        "2026-01-22/llvm-tools-nightly-x86_64-pc-windows-msvc.tar.xz": "ffaa406932b2fe62e01dad61cf4ed34860a5d2a6f9306ca340d79e630d930039",
-        "2026-01-22/rust-std-nightly-x86_64-unknown-linux-gnu.tar.xz": "e9c0d5e06e18a4b509391b3088f29293e310cdc8ccc865be8fa3f09733326925",
-        "2026-01-22/rust-std-nightly-x86_64-apple-darwin.tar.xz": "25d75995cee679a4828ca9fe48c5a31a67c3b0846018440ef912e5a6208f53f6",
-        "2026-01-22/rust-std-nightly-aarch64-apple-darwin.tar.xz": "e4132bf3f2eed4684c86756a02315bcf481c23e675e3e25630fc604c9cb4594c",
-        "2026-01-22/rust-std-nightly-x86_64-pc-windows-msvc.tar.xz": "961bb535ef95ae8a5fa4e224cb94aff190f155c45a9bcf7a53e184b024aa41b1",
+        "2025-08-01/rustc-nightly-x86_64-unknown-linux-gnu.tar.xz": "9bbeaf5d3fc7247d31463a9083aa251c995cc50662c8219e7a2254d76a72a9a4",
+        "2025-08-01/rustc-nightly-x86_64-apple-darwin.tar.xz": "c9ea539a8eff0d5d162701f99f9e1aabe14dd0dfb420d62362817a5d09219de7",
+        "2025-08-01/rustc-nightly-aarch64-apple-darwin.tar.xz": "ae83feebbc39cfd982e4ecc8297731fe79c185173aee138467b334c5404b3773",
+        "2025-08-01/rustc-nightly-x86_64-pc-windows-msvc.tar.xz": "9f170c30d802a349be60cf52ec46260802093cb1013ad667fc0d528b7b10152f",
+        "2025-08-01/clippy-nightly-x86_64-unknown-linux-gnu.tar.xz": "9ae5f3cd8f557c4f6df522597c69d14398cf604cfaed2b83e767c4b77a7eaaf6",
+        "2025-08-01/clippy-nightly-x86_64-apple-darwin.tar.xz": "983cb9ee0b6b968188e04ab2d33743d54764b2681ce565e1b3f2b9135c696a3e",
+        "2025-08-01/clippy-nightly-aarch64-apple-darwin.tar.xz": "ed2219dbc49d088225e1b7c5c4390fa295066e071fddaa2714018f6bb39ddbf0",
+        "2025-08-01/clippy-nightly-x86_64-pc-windows-msvc.tar.xz": "911f40ab5cbdd686f40e00965271fe47c4805513a308ed01f30eafb25b448a50",
+        "2025-08-01/cargo-nightly-x86_64-unknown-linux-gnu.tar.xz": "106463c284e48e4904c717471eeec2be5cc83a9d2cae8d6e948b52438cad2e69",
+        "2025-08-01/cargo-nightly-x86_64-apple-darwin.tar.xz": "6ad35c40efc41a8c531ea43235058347b6902d98a9693bf0aed7fc16d5590cef",
+        "2025-08-01/cargo-nightly-aarch64-apple-darwin.tar.xz": "dd28c365e9d298abc3154c797720ad36a0058f131265c9978b4c8e4e37012c8a",
+        "2025-08-01/cargo-nightly-x86_64-pc-windows-msvc.tar.xz": "7b431286e12d6b3834b038f078389a00cac73f351e8c3152b2504a3c06420b3b",
+        "2025-08-01/llvm-tools-nightly-x86_64-unknown-linux-gnu.tar.xz": "e342e305d7927cc288d386983b2bc253cfad3776b113386e903d0b302648ef47",
+        "2025-08-01/llvm-tools-nightly-x86_64-apple-darwin.tar.xz": "e44dd3506524d85c37b3a54bcc91d01378fd2c590b2db5c5974d12f05c1b84d1",
+        "2025-08-01/llvm-tools-nightly-aarch64-apple-darwin.tar.xz": "0c1b5f46dd81be4a9227b10283a0fcaa39c14fea7e81aea6fd6d9887ff6cdc41",
+        "2025-08-01/llvm-tools-nightly-x86_64-pc-windows-msvc.tar.xz": "423e5fd11406adccbc31b8456ceb7375ce055cdf45e90d2c3babeb2d7f58383f",
+        "2025-08-01/rust-std-nightly-x86_64-unknown-linux-gnu.tar.xz": "3c0ceb46a252647a1d4c7116d9ccae684fa5e42aaf3296419febd2c962c3b41d",
+        "2025-08-01/rust-std-nightly-x86_64-apple-darwin.tar.xz": "3be416003cab10f767390a753d1d16ae4d26c7421c03c98992cf1943e5b0efe8",
+        "2025-08-01/rust-std-nightly-aarch64-apple-darwin.tar.xz": "4046ac0ef951cb056b5028a399124f60999fa37792eab69d008d8d7965f389b4",
+        "2025-08-01/rust-std-nightly-x86_64-pc-windows-msvc.tar.xz": "191ed9d8603c3a4fe5a7bbbc2feb72049078dae2df3d3b7d5dedf3abbf823e6e",
     },
     versions = [RUST_VERSION],
 )
@@ -91,8 +89,8 @@ use_repo(
     "vendor_py__cc-1.2.14",
     "vendor_py__clap-4.5.30",
     "vendor_py__regex-1.11.1",
-    "vendor_py__tree-sitter-0.24.7",
-    "vendor_py__tree-sitter-graph-0.12.0",
+    "vendor_py__tree-sitter-0.20.4",
+    "vendor_py__tree-sitter-graph-0.7.0",
 )
 
 # deps for ruby+rust
@@ -100,60 +98,57 @@ use_repo(
 tree_sitter_extractors_deps = use_extension("//misc/bazel/3rdparty:tree_sitter_extractors_extension.bzl", "r")
 use_repo(
     tree_sitter_extractors_deps,
-    "vendor_ts__anyhow-1.0.100",
+    "vendor_ts__anyhow-1.0.99",
     "vendor_ts__argfile-0.2.1",
     "vendor_ts__chalk-ir-0.104.0",
-    "vendor_ts__chrono-0.4.42",
-    "vendor_ts__clap-4.5.48",
+    "vendor_ts__chrono-0.4.41",
+    "vendor_ts__clap-4.5.44",
     "vendor_ts__dunce-1.0.5",
     "vendor_ts__either-1.15.0",
     "vendor_ts__encoding-0.2.33",
     "vendor_ts__figment-0.10.19",
-    "vendor_ts__flate2-1.1.2",
+    "vendor_ts__flate2-1.1.0",
     "vendor_ts__glob-0.3.3",
-    "vendor_ts__globset-0.4.16",
+    "vendor_ts__globset-0.4.15",
     "vendor_ts__itertools-0.14.0",
     "vendor_ts__lazy_static-1.5.0",
     "vendor_ts__mustache-0.9.0",
     "vendor_ts__num-traits-0.2.19",
     "vendor_ts__num_cpus-1.17.0",
-    "vendor_ts__proc-macro2-1.0.101",
-    "vendor_ts__quote-1.0.41",
-    "vendor_ts__ra_ap_base_db-0.0.301",
-    "vendor_ts__ra_ap_cfg-0.0.301",
-    "vendor_ts__ra_ap_hir-0.0.301",
-    "vendor_ts__ra_ap_hir_def-0.0.301",
-    "vendor_ts__ra_ap_hir_expand-0.0.301",
-    "vendor_ts__ra_ap_hir_ty-0.0.301",
-    "vendor_ts__ra_ap_ide_db-0.0.301",
-    "vendor_ts__ra_ap_intern-0.0.301",
-    "vendor_ts__ra_ap_load-cargo-0.0.301",
-    "vendor_ts__ra_ap_parser-0.0.301",
-    "vendor_ts__ra_ap_paths-0.0.301",
-    "vendor_ts__ra_ap_project_model-0.0.301",
-    "vendor_ts__ra_ap_span-0.0.301",
-    "vendor_ts__ra_ap_stdx-0.0.301",
-    "vendor_ts__ra_ap_syntax-0.0.301",
-    "vendor_ts__ra_ap_vfs-0.0.301",
+    "vendor_ts__proc-macro2-1.0.97",
+    "vendor_ts__quote-1.0.40",
+    "vendor_ts__ra_ap_base_db-0.0.300",
+    "vendor_ts__ra_ap_cfg-0.0.300",
+    "vendor_ts__ra_ap_hir-0.0.300",
+    "vendor_ts__ra_ap_hir_def-0.0.300",
+    "vendor_ts__ra_ap_hir_expand-0.0.300",
+    "vendor_ts__ra_ap_hir_ty-0.0.300",
+    "vendor_ts__ra_ap_ide_db-0.0.300",
+    "vendor_ts__ra_ap_intern-0.0.300",
+    "vendor_ts__ra_ap_load-cargo-0.0.300",
+    "vendor_ts__ra_ap_parser-0.0.300",
+    "vendor_ts__ra_ap_paths-0.0.300",
+    "vendor_ts__ra_ap_project_model-0.0.300",
+    "vendor_ts__ra_ap_span-0.0.300",
+    "vendor_ts__ra_ap_stdx-0.0.300",
+    "vendor_ts__ra_ap_syntax-0.0.300",
+    "vendor_ts__ra_ap_vfs-0.0.300",
     "vendor_ts__rand-0.9.2",
-    "vendor_ts__rayon-1.11.0",
-    "vendor_ts__regex-1.11.3",
-    "vendor_ts__serde-1.0.228",
-    "vendor_ts__serde_json-1.0.145",
-    "vendor_ts__serde_with-3.14.1",
-    "vendor_ts__serde_yaml-0.9.34-deprecated",
-    "vendor_ts__syn-2.0.106",
-    "vendor_ts__toml-0.9.7",
+    "vendor_ts__rayon-1.10.0",
+    "vendor_ts__regex-1.11.1",
+    "vendor_ts__serde-1.0.219",
+    "vendor_ts__serde_json-1.0.142",
+    "vendor_ts__serde_with-3.14.0",
+    "vendor_ts__syn-2.0.104",
+    "vendor_ts__toml-0.9.5",
     "vendor_ts__tracing-0.1.41",
     "vendor_ts__tracing-flame-0.2.0",
-    "vendor_ts__tracing-subscriber-0.3.20",
-    "vendor_ts__tree-sitter-0.26.8",
-    "vendor_ts__tree-sitter-embedded-template-0.25.0",
+    "vendor_ts__tracing-subscriber-0.3.19",
+    "vendor_ts__tree-sitter-0.24.6",
+    "vendor_ts__tree-sitter-embedded-template-0.23.2",
     "vendor_ts__tree-sitter-json-0.24.8",
-    "vendor_ts__tree-sitter-python-0.23.6",
     "vendor_ts__tree-sitter-ql-0.23.1",
     "vendor_ts__tree-sitter-ruby-0.23.1",
-    "vendor_ts__tree-sitter-swift-0.7.2",
     "vendor_ts__triomphe-0.1.14",
     "vendor_ts__ungrammar-1.16.1",
     "vendor_ts__zstd-0.13.3",
@@ -177,7 +172,7 @@ http_archive(
 )
 
 dotnet = use_extension("@rules_dotnet//dotnet:extensions.bzl", "dotnet")
-dotnet.toolchain(dotnet_version = "10.0.100")
+dotnet.toolchain(dotnet_version = "9.0.300")
 use_repo(dotnet, "dotnet_toolchains")
 
 register_toolchains("@dotnet_toolchains//:all")
@@ -193,15 +188,6 @@ pip.parse(
 )
 use_repo(pip, "codegen_deps")
 
-python = use_extension("@rules_python//python/extensions:python.bzl", "python")
-python.toolchain(
-    is_default = True,
-    python_version = "3.12",
-)
-use_repo(python, "python_3_12", "python_versions")
-
-register_toolchains("@python_versions//3.12:all")
-
 swift_deps = use_extension("//swift/third_party:load.bzl", "swift_deps")
 
 # following list can be kept in sync with `bazel mod tidy`
@@ -235,6 +221,10 @@ use_repo(
     kotlin_extractor_deps,
     "codeql_kotlin_defaults",
     "codeql_kotlin_embeddable",
+    "kotlin-compiler-1.6.0",
+    "kotlin-compiler-1.6.20",
+    "kotlin-compiler-1.7.0",
+    "kotlin-compiler-1.7.20",
     "kotlin-compiler-1.8.0",
     "kotlin-compiler-1.9.0-Beta",
     "kotlin-compiler-1.9.20-Beta",
@@ -244,8 +234,10 @@ use_repo(
     "kotlin-compiler-2.1.20-Beta1",
     "kotlin-compiler-2.2.0-Beta1",
     "kotlin-compiler-2.2.20-Beta2",
-    "kotlin-compiler-2.3.0",
-    "kotlin-compiler-2.3.20",
+    "kotlin-compiler-embeddable-1.6.0",
+    "kotlin-compiler-embeddable-1.6.20",
+    "kotlin-compiler-embeddable-1.7.0",
+    "kotlin-compiler-embeddable-1.7.20",
     "kotlin-compiler-embeddable-1.8.0",
     "kotlin-compiler-embeddable-1.9.0-Beta",
     "kotlin-compiler-embeddable-1.9.20-Beta",
@@ -255,8 +247,10 @@ use_repo(
     "kotlin-compiler-embeddable-2.1.20-Beta1",
     "kotlin-compiler-embeddable-2.2.0-Beta1",
     "kotlin-compiler-embeddable-2.2.20-Beta2",
-    "kotlin-compiler-embeddable-2.3.0",
-    "kotlin-compiler-embeddable-2.3.20",
+    "kotlin-stdlib-1.6.0",
+    "kotlin-stdlib-1.6.20",
+    "kotlin-stdlib-1.7.0",
+    "kotlin-stdlib-1.7.20",
     "kotlin-stdlib-1.8.0",
     "kotlin-stdlib-1.9.0-Beta",
     "kotlin-stdlib-1.9.20-Beta",
@@ -266,27 +260,33 @@ use_repo(
     "kotlin-stdlib-2.1.20-Beta1",
     "kotlin-stdlib-2.2.0-Beta1",
     "kotlin-stdlib-2.2.20-Beta2",
-    "kotlin-stdlib-2.3.0",
-    "kotlin-stdlib-2.3.20",
 )
 
 go_sdk = use_extension("@rules_go//go:extensions.bzl", "go_sdk")
-go_sdk.download(version = "1.26.0")
+go_sdk.download(version = "1.25.0")
 
 go_deps = use_extension("@gazelle//:extensions.bzl", "go_deps")
 go_deps.from_file(go_mod = "//go/extractor:go.mod")
-use_repo(go_deps, "com_github_stretchr_testify", "org_golang_x_mod", "org_golang_x_tools")
+use_repo(go_deps, "org_golang_x_mod", "org_golang_x_tools")
 
-ripunzip_archive = use_repo_rule("//misc/ripunzip:ripunzip.bzl", "ripunzip_archive")
+lfs_archive = use_repo_rule("//misc/bazel:lfs.bzl", "lfs_archive")
 
-# go to https://github.com/GoogleChrome/ripunzip/releases to find latest version and corresponding sha256s
-ripunzip_archive(
-    name = "ripunzip",
-    sha256_linux = "71482d7a7e4ea9176d5596161c49250c34b136b157c45f632b1111323fbfc0de",
-    sha256_macos_arm = "604194ab13f0aba3972995d995f11002b8fc285c8170401fcd46655065df20c9",
-    sha256_macos_intel = "65367b94fd579d93d46f2d2595cc4c9a60cfcf497e3c824f9d1a7b80fa8bd38a",
-    sha256_windows = "ac3874075def2b9e5074a3b5945005ab082cc6e689e1de658da8965bc23e643e",
-    version = "2.0.4",
+lfs_archive(
+    name = "ripunzip-linux",
+    src = "//misc/ripunzip:ripunzip-Linux.zip",
+    build_file = "//misc/ripunzip:BUILD.ripunzip.bazel",
+)
+
+lfs_archive(
+    name = "ripunzip-windows",
+    src = "//misc/ripunzip:ripunzip-Windows.zip",
+    build_file = "//misc/ripunzip:BUILD.ripunzip.bazel",
+)
+
+lfs_archive(
+    name = "ripunzip-macos",
+    src = "//misc/ripunzip:ripunzip-macOS.zip",
+    build_file = "//misc/ripunzip:BUILD.ripunzip.bazel",
 )
 
 register_toolchains(

actions/ql/examples/codeql-pack.lock.yml

@@ -1,4 +0,0 @@
----
-lockVersion: 1.0.0
-dependencies: {}
-compiled: false

actions/ql/examples/qlpack.yml

@@ -1,7 +0,0 @@
-name: codeql/actions-examples
-groups:
-  - actions
-  - examples
-dependencies:
-  codeql/actions-all: ${workspace}
-warnOnImplicitThis: true

actions/ql/examples/snippets/uses_pinned_sha.ql

@@ -1,12 +0,0 @@
-/**
- * @name Uses step with pinned SHA
- * @description Finds 'uses' steps where the version is a pinned SHA.
- * @id actions/examples/uses-pinned-sha
- * @tags example
- */
-
-import actions
-
-from UsesStep uses
-where uses.getVersion().regexpMatch("^[A-Fa-f0-9]{40}$")
-select uses, "This 'uses' step has a pinned SHA version."

actions/ql/lib/CHANGELOG.md

@@ -1,85 +1,3 @@
-## 0.4.35
-
-No user-facing changes.
-
-## 0.4.34
-
-### Minor Analysis Improvements
-
-* Removed false positive injection sink models for the `context` input of `docker/build-push-action` and the `allowed-endpoints` input of `step-security/harden-runner`.
-
-## 0.4.33
-
-No user-facing changes.
-
-## 0.4.32
-
-No user-facing changes.
-
-## 0.4.31
-
-No user-facing changes.
-
-## 0.4.30
-
-No user-facing changes.
-
-## 0.4.29
-
-No user-facing changes.
-
-## 0.4.28
-
-No user-facing changes.
-
-## 0.4.27
-
-### Bug Fixes
-
-* Fixed a crash when analysing a `${{ ... }}` expression over around 300 characters in length.
-
-## 0.4.26
-
-### Major Analysis Improvements
-
-* The query `actions/code-injection/medium` has been updated to include results which were incorrectly excluded while filtering out results that are reported by `actions/code-injection/critical`.
-
-## 0.4.25
-
-No user-facing changes.
-
-## 0.4.24
-
-No user-facing changes.
-
-## 0.4.23
-
-No user-facing changes.
-
-## 0.4.22
-
-No user-facing changes.
-
-## 0.4.21
-
-No user-facing changes.
-
-## 0.4.20
-
-No user-facing changes.
-
-## 0.4.19
-
-No user-facing changes.
-
-## 0.4.18
-
-No user-facing changes.
-
-## 0.4.17
-
-No user-facing changes.
-
 ## 0.4.16
 
 No user-facing changes.

actions/ql/lib/change-notes/2026-04-15-poisonable-steps-additions-alterations.md

@@ -1,4 +0,0 @@
----
-category: minorAnalysis
----
-* Altered 2 patterns in the `poisonable_steps` modelling. Extra sinks are detected in the following cases: scripts executed via python modules and `go run` in directories are detected as potential mechanisms of injection. For the go execution pattern, the pattern is updated to now ignore flags that occur between go and the specific command. This change may lead to more results being detected by the following queries: `actions/untrusted-checkout/high`, `actions/untrusted-checkout/critical`, `actions/untrusted-checkout-toctou/high`, `actions/untrusted-checkout-toctou/critical`, `actions/cache-poisoning/poisonable-step`, `actions/cache-poisoning/direct-cache` and `actions/artifact-poisoning/path-traversal`.

actions/ql/lib/change-notes/released/0.4.17.md

@@ -1,3 +0,0 @@
-## 0.4.17
-
-No user-facing changes.

actions/ql/lib/change-notes/released/0.4.18.md

@@ -1,3 +0,0 @@
-## 0.4.18
-
-No user-facing changes.

actions/ql/lib/change-notes/released/0.4.19.md

@@ -1,3 +0,0 @@
-## 0.4.19
-
-No user-facing changes.

actions/ql/lib/change-notes/released/0.4.20.md

@@ -1,3 +0,0 @@
-## 0.4.20
-
-No user-facing changes.

actions/ql/lib/change-notes/released/0.4.21.md

@@ -1,3 +0,0 @@
-## 0.4.21
-
-No user-facing changes.

actions/ql/lib/change-notes/released/0.4.22.md

@@ -1,3 +0,0 @@
-## 0.4.22
-
-No user-facing changes.

actions/ql/lib/change-notes/released/0.4.23.md

@@ -1,3 +0,0 @@
-## 0.4.23
-
-No user-facing changes.

actions/ql/lib/change-notes/released/0.4.24.md

@@ -1,3 +0,0 @@
-## 0.4.24
-
-No user-facing changes.

actions/ql/lib/change-notes/released/0.4.25.md

@@ -1,3 +0,0 @@
-## 0.4.25
-
-No user-facing changes.

actions/ql/lib/change-notes/released/0.4.26.md

@@ -1,5 +0,0 @@
-## 0.4.26
-
-### Major Analysis Improvements
-
-* The query `actions/code-injection/medium` has been updated to include results which were incorrectly excluded while filtering out results that are reported by `actions/code-injection/critical`.

actions/ql/lib/change-notes/released/0.4.27.md

@@ -1,5 +0,0 @@
-## 0.4.27
-
-### Bug Fixes
-
-* Fixed a crash when analysing a `${{ ... }}` expression over around 300 characters in length.

actions/ql/lib/change-notes/released/0.4.28.md

@@ -1,3 +0,0 @@
-## 0.4.28
-
-No user-facing changes.

actions/ql/lib/change-notes/released/0.4.29.md

@@ -1,3 +0,0 @@
-## 0.4.29
-
-No user-facing changes.

actions/ql/lib/change-notes/released/0.4.30.md

@@ -1,3 +0,0 @@
-## 0.4.30
-
-No user-facing changes.

actions/ql/lib/change-notes/released/0.4.31.md

@@ -1,3 +0,0 @@
-## 0.4.31
-
-No user-facing changes.

actions/ql/lib/change-notes/released/0.4.32.md

@@ -1,3 +0,0 @@
-## 0.4.32
-
-No user-facing changes.

actions/ql/lib/change-notes/released/0.4.33.md

@@ -1,3 +0,0 @@
-## 0.4.33
-
-No user-facing changes.

actions/ql/lib/change-notes/released/0.4.34.md

@@ -1,5 +0,0 @@
-## 0.4.34
-
-### Minor Analysis Improvements
-
-* Removed false positive injection sink models for the `context` input of `docker/build-push-action` and the `allowed-endpoints` input of `step-security/harden-runner`.

actions/ql/lib/change-notes/released/0.4.35.md

@@ -1,3 +0,0 @@
-## 0.4.35
-
-No user-facing changes.

actions/ql/lib/codeql-pack.release.yml

@@ -1,2 +1,2 @@
 ---
-lastReleaseVersion: 0.4.35
+lastReleaseVersion: 0.4.16

actions/ql/lib/codeql/actions/ast/internal/Ast.qll

@@ -27,8 +27,8 @@ string getADelimitedExpression(YamlString s, int offset) {
   // not just the last (greedy match) or first (reluctant match).
   result =
     s.getValue()
-        .regexpFind("\\$\\{\\{(?:[^}]|}(?!}))*+\\}\\}", _, offset)
-        .regexpCapture("(\\$\\{\\{(?:[^}]|}(?!}))*+\\}\\})", 1)
+        .regexpFind("\\$\\{\\{(?:[^}]|}(?!}))*\\}\\}", _, offset)
+        .regexpCapture("(\\$\\{\\{(?:[^}]|}(?!}))*\\}\\})", 1)
         .trim()
 }
 

actions/ql/lib/codeql/actions/security/ArgumentInjectionQuery.qll

@@ -100,6 +100,8 @@ private module ArgumentInjectionConfig implements DataFlow::ConfigSig {
 
   predicate observeDiffInformedIncrementalMode() { any() }
 
+  Location getASelectedSourceLocation(DataFlow::Node source) { none() }
+
   Location getASelectedSinkLocation(DataFlow::Node sink) {
     result = sink.getLocation()
     or

actions/ql/lib/codeql/actions/security/ArtifactPoisoningQuery.qll

@@ -333,6 +333,8 @@ private module ArtifactPoisoningConfig implements DataFlow::ConfigSig {
 
   predicate observeDiffInformedIncrementalMode() { any() }
 
+  Location getASelectedSourceLocation(DataFlow::Node source) { none() }
+
   Location getASelectedSinkLocation(DataFlow::Node sink) {
     result = sink.getLocation()
     or

actions/ql/lib/codeql/actions/security/CodeInjectionQuery.qll

@@ -19,7 +19,12 @@ class CodeInjectionSink extends DataFlow::Node {
 Event getRelevantCriticalEventForSink(DataFlow::Node sink) {
   inPrivilegedContext(sink.asExpr(), result) and
   not exists(ControlCheck check | check.protects(sink.asExpr(), result, "code-injection")) and
-  not isGithubScriptUsingToJson(sink.asExpr())
+  // exclude cases where the sink is a JS script and the expression uses toJson
+  not exists(UsesStep script |
+    script.getCallee() = "actions/github-script" and
+    script.getArgumentExpr("script") = sink.asExpr() and
+    exists(getAToJsonReferenceExpression(sink.asExpr().(Expression).getExpression(), _))
+  )
 }
 
 /**
@@ -75,6 +80,8 @@ private module CodeInjectionConfig implements DataFlow::ConfigSig {
 
   predicate observeDiffInformedIncrementalMode() { any() }
 
+  Location getASelectedSourceLocation(DataFlow::Node source) { none() }
+
   Location getASelectedSinkLocation(DataFlow::Node sink) {
     result = sink.getLocation()
     or
@@ -86,38 +93,3 @@ private module CodeInjectionConfig implements DataFlow::ConfigSig {
 
 /** Tracks flow of unsafe user input that is used to construct and evaluate a code script. */
 module CodeInjectionFlow = TaintTracking::Global<CodeInjectionConfig>;
-
-/**
- * Holds if there is a code injection flow from `source` to `sink` with
- * critical severity, linked by `event`.
- */
-predicate criticalSeverityCodeInjection(
-  CodeInjectionFlow::PathNode source, CodeInjectionFlow::PathNode sink, Event event
-) {
-  CodeInjectionFlow::flowPath(source, sink) and
-  event = getRelevantCriticalEventForSink(sink.getNode()) and
-  source.getNode().(RemoteFlowSource).getEventName() = event.getName()
-}
-
-/**
- * Holds if there is a code injection flow from `source` to `sink` with medium severity.
- */
-predicate mediumSeverityCodeInjection(
-  CodeInjectionFlow::PathNode source, CodeInjectionFlow::PathNode sink
-) {
-  CodeInjectionFlow::flowPath(source, sink) and
-  not criticalSeverityCodeInjection(source, sink, _) and
-  not isGithubScriptUsingToJson(sink.getNode().asExpr())
-}
-
-/**
- * Holds if `expr` is the `script` input to `actions/github-script` and it uses
- * `toJson`.
- */
-predicate isGithubScriptUsingToJson(Expression expr) {
-  exists(UsesStep script |
-    script.getCallee() = "actions/github-script" and
-    script.getArgumentExpr("script") = expr and
-    exists(getAToJsonReferenceExpression(expr.getExpression(), _))
-  )
-}

actions/ql/lib/codeql/actions/security/EnvPathInjectionQuery.qll

@@ -130,6 +130,8 @@ private module EnvPathInjectionConfig implements DataFlow::ConfigSig {
 
   predicate observeDiffInformedIncrementalMode() { any() }
 
+  Location getASelectedSourceLocation(DataFlow::Node source) { none() }
+
   Location getASelectedSinkLocation(DataFlow::Node sink) {
     result = sink.getLocation()
     or

actions/ql/lib/codeql/actions/security/EnvVarInjectionQuery.qll

@@ -184,6 +184,8 @@ private module EnvVarInjectionConfig implements DataFlow::ConfigSig {
 
   predicate observeDiffInformedIncrementalMode() { any() }
 
+  Location getASelectedSourceLocation(DataFlow::Node source) { none() }
+
   Location getASelectedSinkLocation(DataFlow::Node sink) {
     result = sink.getLocation()
     or

actions/ql/lib/codeql/actions/security/OutputClobberingQuery.qll

@@ -212,6 +212,8 @@ private module OutputClobberingConfig implements DataFlow::ConfigSig {
   }
 
   predicate observeDiffInformedIncrementalMode() { any() }
+
+  Location getASelectedSourceLocation(DataFlow::Node sink) { none() }
 }
 
 /** Tracks flow of unsafe user input that is used to construct and evaluate an environment variable. */

actions/ql/lib/codeql/actions/security/RequestForgeryQuery.qll

@@ -18,6 +18,8 @@ private module RequestForgeryConfig implements DataFlow::ConfigSig {
   predicate isSink(DataFlow::Node sink) { sink instanceof RequestForgerySink }
 
   predicate observeDiffInformedIncrementalMode() { any() }
+
+  Location getASelectedSourceLocation(DataFlow::Node sink) { none() }
 }
 
 /** Tracks flow of unsafe user input that is used to construct and evaluate a system command. */

actions/ql/lib/codeql/actions/security/SecretExfiltrationQuery.qll

@@ -17,6 +17,8 @@ private module SecretExfiltrationConfig implements DataFlow::ConfigSig {
   predicate isSink(DataFlow::Node sink) { sink instanceof SecretExfiltrationSink }
 
   predicate observeDiffInformedIncrementalMode() { any() }
+
+  Location getASelectedSourceLocation(DataFlow::Node sink) { none() }
 }
 
 /** Tracks flow of unsafe user input that is used in a context where it may lead to a secret exfiltration. */

actions/ql/lib/ext/config/poisonable_steps.yml

@@ -70,7 +70,7 @@ extensions:
       - ["(source|sh|bash|zsh|fish)\\s+([^\\s]+)\\b", 2]
       - ["(node)\\s+([^\\s]+)(\\.js|\\.ts)\\b", 2]
       - ["(python[\\d\\.]*)\\s+([^\\s]+)\\.py\\b", 2]
-      - ["(python[\\d\\.]*)\\s+-m\\s+([A-Za-z_][\\w\\.]*)\\b", 2] # eg: pythonX -m anything(dir or file)
       - ["(ruby)\\s+([^\\s]+)\\.rb\\b", 2]
-      - ["(go)\\s+(generate|run)(?:\\s+-[^\\s]+)*\\s+([^\\s]+)", 3]
+      - ["(go)\\s+(generate|run)\\s+([^\\s]+)\\.go\\b", 3]
       - ["(dotnet)\\s+([^\\s]+)\\.csproj\\b", 2]
+

actions/ql/lib/ext/manual/docker_build-push-action.model.yml

@@ -0,0 +1,6 @@
+extensions:
+  - addsTo:
+      pack: codeql/actions-all
+      extensible: actionsSinkModel
+    data:
+      - ["docker/build-push-action", "*", "input.context", "code-injection", "manual"]

actions/ql/lib/ext/manual/step-security_harden-runner.model.yml

@@ -0,0 +1,6 @@
+extensions:
+  - addsTo:
+      pack: codeql/actions-all
+      extensible: actionsSinkModel
+    data:
+      - ["step-security/harden-runner", "*", "input.allowed-endpoints", "command-injection", "manual"]

actions/ql/lib/qlpack.yml

@@ -1,5 +1,5 @@
 name: codeql/actions-all
-version: 0.4.36-dev
+version: 0.4.17-dev
 library: true
 warnOnImplicitThis: true
 dependencies:

actions/ql/src/CHANGELOG.md

@@ -1,87 +1,3 @@
-## 0.6.27
-
-No user-facing changes.
-
-## 0.6.26
-
-### Major Analysis Improvements
-
-* Fixed alert messages in `actions/artifact-poisoning/critical` and `actions/artifact-poisoning/medium` as they previously included a redundant placeholder in the alert message that would on occasion contain a long block of yml that makes the alert difficult to understand. Also improved the wording to make it clearer that it is not the artifact that is being poisoned, but instead a potentially untrusted artifact that is consumed. Finally, changed the alert location to be the source, to align more with other queries reporting an artifact (e.g. zipslip) which is more useful.
-
-### Minor Analysis Improvements
-
-* The query `actions/missing-workflow-permissions` no longer produces false positive results on reusable workflows where all callers set permissions.
-
-## 0.6.25
-
-No user-facing changes.
-
-## 0.6.24
-
-No user-facing changes.
-
-## 0.6.23
-
-No user-facing changes.
-
-## 0.6.22
-
-No user-facing changes.
-
-## 0.6.21
-
-No user-facing changes.
-
-## 0.6.20
-
-No user-facing changes.
-
-## 0.6.19
-
-No user-facing changes.
-
-## 0.6.18
-
-No user-facing changes.
-
-## 0.6.17
-
-No user-facing changes.
-
-## 0.6.16
-
-No user-facing changes.
-
-## 0.6.15
-
-No user-facing changes.
-
-## 0.6.14
-
-No user-facing changes.
-
-## 0.6.13
-
-No user-facing changes.
-
-## 0.6.12
-
-No user-facing changes.
-
-## 0.6.11
-
-No user-facing changes.
-
-## 0.6.10
-
-No user-facing changes.
-
-## 0.6.9
-
-### Minor Analysis Improvements
-
-* Actions analysis now reports file coverage information on the CodeQL status page.
-
 ## 0.6.8
 
 No user-facing changes.

actions/ql/src/Models/CompositeActionsSinks.ql

@@ -26,6 +26,8 @@ private module MyConfig implements DataFlow::ConfigSig {
   }
 
   predicate observeDiffInformedIncrementalMode() { any() }
+
+  Location getASelectedSourceLocation(DataFlow::Node sink) { none() }
 }
 
 module MyFlow = TaintTracking::Global<MyConfig>;

actions/ql/src/Models/CompositeActionsSources.ql

@@ -36,6 +36,8 @@ private module MyConfig implements DataFlow::ConfigSig {
   }
 
   predicate observeDiffInformedIncrementalMode() { any() }
+
+  Location getASelectedSourceLocation(DataFlow::Node sink) { none() }
 }
 
 module MyFlow = TaintTracking::Global<MyConfig>;

actions/ql/src/Models/CompositeActionsSummaries.ql

@@ -27,6 +27,8 @@ private module MyConfig implements DataFlow::ConfigSig {
   }
 
   predicate observeDiffInformedIncrementalMode() { any() }
+
+  Location getASelectedSourceLocation(DataFlow::Node sink) { none() }
 }
 
 module MyFlow = TaintTracking::Global<MyConfig>;

actions/ql/src/Models/ReusableWorkflowsSinks.ql

@@ -26,6 +26,8 @@ private module MyConfig implements DataFlow::ConfigSig {
   }
 
   predicate observeDiffInformedIncrementalMode() { any() }
+
+  Location getASelectedSourceLocation(DataFlow::Node sink) { none() }
 }
 
 module MyFlow = TaintTracking::Global<MyConfig>;

actions/ql/src/Models/ReusableWorkflowsSources.ql

@@ -36,6 +36,8 @@ private module MyConfig implements DataFlow::ConfigSig {
   }
 
   predicate observeDiffInformedIncrementalMode() { any() }
+
+  Location getASelectedSourceLocation(DataFlow::Node sink) { none() }
 }
 
 module MyFlow = TaintTracking::Global<MyConfig>;

actions/ql/src/Models/ReusableWorkflowsSummaries.ql

@@ -27,6 +27,8 @@ private module MyConfig implements DataFlow::ConfigSig {
   }
 
   predicate observeDiffInformedIncrementalMode() { any() }
+
+  Location getASelectedSourceLocation(DataFlow::Node sink) { none() }
 }
 
 module MyFlow = TaintTracking::Global<MyConfig>;

actions/ql/src/Security/CWE-094/CodeInjectionCritical.ql

@@ -20,7 +20,10 @@ import CodeInjectionFlow::PathGraph
 import codeql.actions.security.ControlChecks
 
 from CodeInjectionFlow::PathNode source, CodeInjectionFlow::PathNode sink, Event event
-where criticalSeverityCodeInjection(source, sink, event)
+where
+  CodeInjectionFlow::flowPath(source, sink) and
+  event = getRelevantCriticalEventForSink(sink.getNode()) and
+  source.getNode().(RemoteFlowSource).getEventName() = event.getName()
 select sink.getNode(), source, sink,
   "Potential code injection in $@, which may be controlled by an external user ($@).", sink,
   sink.getNode().asExpr().(Expression).getRawExpression(), event, event.getName()

actions/ql/src/Security/CWE-094/CodeInjectionMedium.ql

@@ -19,7 +19,15 @@ import codeql.actions.security.CodeInjectionQuery
 import CodeInjectionFlow::PathGraph
 
 from CodeInjectionFlow::PathNode source, CodeInjectionFlow::PathNode sink
-where mediumSeverityCodeInjection(source, sink)
+where
+  CodeInjectionFlow::flowPath(source, sink) and
+  inNonPrivilegedContext(sink.getNode().asExpr()) and
+  // exclude cases where the sink is a JS script and the expression uses toJson
+  not exists(UsesStep script |
+    script.getCallee() = "actions/github-script" and
+    script.getArgumentExpr("script") = sink.getNode().asExpr() and
+    exists(getAToJsonReferenceExpression(sink.getNode().asExpr().(Expression).getExpression(), _))
+  )
 select sink.getNode(), source, sink,
   "Potential code injection in $@, which may be controlled by an external user.", sink,
   sink.getNode().asExpr().(Expression).getRawExpression()

actions/ql/src/Security/CWE-275/MissingActionsPermissions.md

@@ -2,8 +2,6 @@
 
 If a GitHub Actions job or workflow has no explicit permissions set, then the repository permissions are used. Repositories created under organizations inherit the organization permissions. The organizations or repositories created before February 2023 have the default permissions set to read-write. Often these permissions do not adhere to the principle of least privilege and can be reduced to read-only, leaving the `write` permission only to a specific types as `issues: write` or `pull-requests: write`.
 
-Note that this query cannot check whether the organization or repository token settings are set to read-only. However, even if they are, it is recommended to define explicit permissions (`contents: read` and `packages: read` are equivalent to the read-only default) so that (a) the actual needs of the workflow are documented, and (b) the permissions will remain restricted if the default is subsequently changed, or the workflow is copied to a different repository or organization.
-
 ## Recommendation
 
 Add the `permissions` key to the job or the root of workflow (in this case it is applied to all jobs in the workflow that do not have their own `permissions` key) and assign the least privileges required to complete the task.

actions/ql/src/Security/CWE-275/MissingActionsPermissions.ql

@@ -26,23 +26,10 @@ string permissionsForJob(Job job) {
     "{" + concat(string permission | permission = jobNeedsPermission(job) | permission, ", ") + "}"
 }
 
-predicate jobHasPermissions(Job job) {
-  exists(job.getPermissions())
-  or
-  exists(job.getEnclosingWorkflow().getPermissions())
-  or
-  // The workflow is reusable and cannot be triggered in any other way; check callers
-  exists(ReusableWorkflow r | r = job.getEnclosingWorkflow() |
-    not exists(Event e | e = r.getOn().getAnEvent() | e.getName() != "workflow_call") and
-    forall(Job caller | caller = job.getEnclosingWorkflow().(ReusableWorkflow).getACaller() |
-      jobHasPermissions(caller)
-    )
-  )
-}
-
 from Job job, string permissions
 where
-  not jobHasPermissions(job) and
+  not exists(job.getPermissions()) and
+  not exists(job.getEnclosingWorkflow().getPermissions()) and
   // exists a trigger event that is not a workflow_call
   exists(Event e |
     e = job.getATriggerEvent() and

actions/ql/src/Security/CWE-829/ArtifactPoisoningCritical.ql

@@ -20,6 +20,6 @@ from ArtifactPoisoningFlow::PathNode source, ArtifactPoisoningFlow::PathNode sin
 where
   ArtifactPoisoningFlow::flowPath(source, sink) and
   event = getRelevantEventInPrivilegedContext(sink.getNode())
-select source.getNode(), source, sink,
-  "Potential artifact poisoning; the artifact being consumed has contents that may be controlled by an external user ($@).",
-  event, event.getName()
+select sink.getNode(), source, sink,
+  "Potential artifact poisoning in $@, which may be controlled by an external user ($@).", sink,
+  sink.getNode().toString(), event, event.getName()

actions/ql/src/Security/CWE-829/ArtifactPoisoningMedium.ql

@@ -20,5 +20,6 @@ from ArtifactPoisoningFlow::PathNode source, ArtifactPoisoningFlow::PathNode sin
 where
   ArtifactPoisoningFlow::flowPath(source, sink) and
   inNonPrivilegedContext(sink.getNode().asExpr())
-select source.getNode(), source, sink,
-  "Potential artifact poisoning; the artifact being consumed has contents that may be controlled by an external user."
+select sink.getNode(), source, sink,
+  "Potential artifact poisoning in $@, which may be controlled by an external user.", sink,
+  sink.getNode().toString()

actions/ql/src/Security/CWE-829/UntrustedCheckoutCritical.md

@@ -1,35 +1,6 @@
 ## Overview
 
-GitHub workflows can be triggered through various repository events, including incoming pull requests (PRs) or comments on Issues/PRs. Under certain conditions described below, attackers can take over a repository by opening malicious PRs from forks. The attacks can result in malicious code execution causing unauthorized changes to the repository or exfiltration of repository secrets and a compromise of connected systems.
-
-## Workflow Security Model
-
-In GitHub Actions, there is a distinction between unprivileged and privileged workflows. For example, a workflow with a `pull_request` trigger is unprivileged while a workflow with `pull_request_target` is privileged.
-
-This is relevant especially for PRs from forks. Normal PRs can only be submitted by people who have write access to a repository, while PRs from forks can be submitted by anyone.
-
-On a PR from a fork, an unprivileged `pull_request` workflow has only limited capabilities but a privileged `pull_request_target` workflow is much more dangerous. A privileged workflow:
-
-  * Runs in the context of the base repository
-  * Has access to organization and repository secrets (e.g., API keys, deployment tokens)
-  * Has a read/write `GITHUB_TOKEN` by default
-  * Can access private resources
-
-Certain triggers automatically grant a workflow elevated privileges:
-
-  * `pull_request_target` as described above
-  * `workflow_run`: Triggered when another workflow completes.
-  * `issue_comment`: Triggered when a comment is made on an issue or PR.
-
-## Attack Details
-
-  * A repository has a privileged workflow
-  * An attacker forks the repository and adds malicious code (e.g., in the build script)
-  * The attacker opens a PR from the fork, and, if needed, comments on the PR
-  * The workflow in the base repository checks out the forked code
-  * The workflow runs, (e.g. the build script etc.), which contains the malicious code
-
-Please note that not only build scripts can be malicious code vectors. There is a large number of other possibilities. Some of them are listed in the [LOTP](https://boostsecurityio.github.io/lotp/) catalog.
+GitHub workflows can be triggered through various repository events, including incoming pull requests (PRs) or comments on Issues/PRs. A potentially dangerous misuse of the triggers such as `pull_request_target` or `issue_comment` followed by an explicit checkout of untrusted code (Pull Request HEAD) may lead to repository compromise if untrusted code gets executed (e.g., due to a modified build script) in a privileged job.
 
 ## Recommendation
 
@@ -162,5 +133,3 @@ jobs:
 ## References
 
 - GitHub Security Lab Research: [Keeping your GitHub Actions and workflows secure Part 1: Preventing pwn requests](https://securitylab.github.com/research/github-actions-preventing-pwn-requests/).
-- Mitigating risks of untrusted checkout: [GitHub Docs](https://docs.github.com/en/enterprise-cloud@latest/actions/reference/security/secure-use#mitigating-the-risks-of-untrusted-code-checkout).
-- Living Off the Pipeline: [LOTP](https://boostsecurityio.github.io/lotp/).

actions/ql/src/Security/CWE-829/UntrustedCheckoutHigh.md

@@ -1,35 +1,6 @@
 ## Overview
 
-GitHub workflows can be triggered through various repository events, including incoming pull requests (PRs) or comments on Issues/PRs. Under certain conditions described below, attackers can take over a repository by opening malicious PRs from forks. The attacks can result in malicious code execution causing unauthorized changes to the repository or exfiltration of repository secrets and a compromise of connected systems.
-
-## Workflow Security Model
-
-In GitHub Actions, there is a distinction between unprivileged and privileged workflows. For example, a workflow with a `pull_request` trigger is unprivileged while a workflow with `pull_request_target` is privileged.
-
-This is relevant especially for PRs from forks. Normal PRs can only be submitted by people who have write access to a repository, while PRs from forks can be submitted by anyone.
-
-On a PR from a fork, an unprivileged `pull_request` workflow has only limited capabilities but a privileged `pull_request_target` workflow is much more dangerous. A privileged workflow:
-
-  * Runs in the context of the base repository
-  * Has access to organization and repository secrets (e.g., API keys, deployment tokens)
-  * Has a read/write `GITHUB_TOKEN` by default
-  * Can access private resources
-
-Certain triggers automatically grant a workflow elevated privileges:
-
-  * `pull_request_target` as described above
-  * `workflow_run`: Triggered when another workflow completes.
-  * `issue_comment`: Triggered when a comment is made on an issue or PR.
-
-## Attack Details
-
-  * A repository has a privileged workflow
-  * An attacker forks the repository and adds malicious code (e.g., in the build script)
-  * The attacker opens a PR from the fork, and, if needed, comments on the PR
-  * The workflow in the base repository checks out the forked code
-  * The workflow runs, (e.g. the build script etc.), which contains the malicious code
-
-Please note that not only build scripts can be malicious code vectors. There is a large number of other possibilities. Some of them are listed in the [LOTP](https://boostsecurityio.github.io/lotp/) catalog.
+GitHub workflows can be triggered through various repository events, including incoming pull requests (PRs) or comments on Issues/PRs. A potentially dangerous misuse of the triggers such as `pull_request_target` or `issue_comment` followed by an explicit checkout of untrusted code (Pull Request HEAD) may lead to repository compromise if untrusted code gets executed (e.g., due to a modified build script) in a privileged job.
 
 ## Recommendation
 
@@ -162,5 +133,3 @@ jobs:
 ## References
 
 - GitHub Security Lab Research: [Keeping your GitHub Actions and workflows secure Part 1: Preventing pwn requests](https://securitylab.github.com/research/github-actions-preventing-pwn-requests/).
-- Mitigating risks of untrusted checkout: [GitHub Docs](https://docs.github.com/en/enterprise-cloud@latest/actions/reference/security/secure-use#mitigating-the-risks-of-untrusted-code-checkout).
-- Living Off the Pipeline: [LOTP](https://boostsecurityio.github.io/lotp/).

actions/ql/src/Security/CWE-829/UntrustedCheckoutHigh.ql

@@ -1,5 +1,5 @@
 /**
- * @name Checkout of untrusted code in privileged context without privileged context use
+ * @name Checkout of untrusted code in trusted context
  * @description Privileged workflows have read/write access to the base repository and access to secrets.
  *              By explicitly checking out and running the build script from a fork the untrusted code is running in an environment
  *              that is able to push to the base repository and to access secrets.

actions/ql/src/Security/CWE-829/UntrustedCheckoutMedium.md

@@ -1,35 +1,6 @@
 ## Overview
 
-GitHub workflows can be triggered through various repository events, including incoming pull requests (PRs) or comments on Issues/PRs. Under certain conditions described below, attackers can take over a repository by opening malicious PRs from forks. The attacks can result in malicious code execution causing unauthorized changes to the repository or exfiltration of repository secrets and a compromise of connected systems.
-
-## Workflow Security Model
-
-In GitHub Actions, there is a distinction between unprivileged and privileged workflows. For example, a workflow with a `pull_request` trigger is unprivileged while a workflow with `pull_request_target` is privileged.
-
-This is relevant especially for PRs from forks. Normal PRs can only be submitted by people who have write access to a repository, while PRs from forks can be submitted by anyone.
-
-On a PR from a fork, an unprivileged `pull_request` workflow has only limited capabilities but a privileged `pull_request_target` workflow is much more dangerous. A privileged workflow:
-
-  * Runs in the context of the base repository
-  * Has access to organization and repository secrets (e.g., API keys, deployment tokens)
-  * Has a read/write `GITHUB_TOKEN` by default
-  * Can access private resources
-
-Certain triggers automatically grant a workflow elevated privileges:
-
-  * `pull_request_target` as described above
-  * `workflow_run`: Triggered when another workflow completes.
-  * `issue_comment`: Triggered when a comment is made on an issue or PR.
-
-## Attack Details
-
-  * A repository has a privileged workflow
-  * An attacker forks the repository and adds malicious code (e.g., in the build script)
-  * The attacker opens a PR from the fork, and, if needed, comments on the PR
-  * The workflow in the base repository checks out the forked code
-  * The workflow runs, (e.g. the build script etc.), which contains the malicious code
-
-Please note that not only build scripts can be malicious code vectors. There is a large number of other possibilities. Some of them are listed in the [LOTP](https://boostsecurityio.github.io/lotp/) catalog.
+GitHub workflows can be triggered through various repository events, including incoming pull requests (PRs) or comments on Issues/PRs. A potentially dangerous misuse of the triggers such as `pull_request_target` or `issue_comment` followed by an explicit checkout of untrusted code (Pull Request HEAD) may lead to repository compromise if untrusted code gets executed (e.g., due to a modified build script) in a privileged job.
 
 ## Recommendation
 
@@ -162,5 +133,3 @@ jobs:
 ## References
 
 - GitHub Security Lab Research: [Keeping your GitHub Actions and workflows secure Part 1: Preventing pwn requests](https://securitylab.github.com/research/github-actions-preventing-pwn-requests/).
-- Mitigating risks of untrusted checkout: [GitHub Docs](https://docs.github.com/en/enterprise-cloud@latest/actions/reference/security/secure-use#mitigating-the-risks-of-untrusted-code-checkout).
-- Living Off the Pipeline: [LOTP](https://boostsecurityio.github.io/lotp/).

actions/ql/src/change-notes/2025-09-05-file-coverage.md

@@ -0,0 +1,4 @@
+---
+category: minorAnalysis
+---
+* Actions analysis now reports file coverage information on the CodeQL status page.

actions/ql/src/change-notes/2026-04-15-untrusted-checkout-improvements-helpfile.md

@@ -1,4 +0,0 @@
----
-category: fix
----
-* Fixed help file descriptions for queries: `actions/untrusted-checkout/critical`, `actions/untrusted-checkout/high`, `actions/untrusted-checkout/medium`. Previously the messages were unclear as to why and how the vulnerabilities could occur. 

actions/ql/src/change-notes/2026-04-15-untrusted-checkout-improvements-metadata.md

@@ -1,4 +0,0 @@
----
-category: queryMetadata
----
-* Adjusted the name of `actions/untrusted-checkout/high` to more clearly describe which parts of the scenario are in a privileged context.

actions/ql/src/change-notes/released/0.6.10.md

@@ -1,3 +0,0 @@
-## 0.6.10
-
-No user-facing changes.

actions/ql/src/change-notes/released/0.6.11.md

@@ -1,3 +0,0 @@
-## 0.6.11
-
-No user-facing changes.

actions/ql/src/change-notes/released/0.6.12.md

@@ -1,3 +0,0 @@
-## 0.6.12
-
-No user-facing changes.

actions/ql/src/change-notes/released/0.6.13.md

@@ -1,3 +0,0 @@
-## 0.6.13
-
-No user-facing changes.

actions/ql/src/change-notes/released/0.6.14.md

@@ -1,3 +0,0 @@
-## 0.6.14
-
-No user-facing changes.

actions/ql/src/change-notes/released/0.6.15.md

@@ -1,3 +0,0 @@
-## 0.6.15
-
-No user-facing changes.

actions/ql/src/change-notes/released/0.6.16.md

@@ -1,3 +0,0 @@
-## 0.6.16
-
-No user-facing changes.

actions/ql/src/change-notes/released/0.6.17.md

@@ -1,3 +0,0 @@
-## 0.6.17
-
-No user-facing changes.

actions/ql/src/change-notes/released/0.6.18.md

@@ -1,3 +0,0 @@
-## 0.6.18
-
-No user-facing changes.

actions/ql/src/change-notes/released/0.6.19.md

@@ -1,3 +0,0 @@
-## 0.6.19
-
-No user-facing changes.

actions/ql/src/change-notes/released/0.6.20.md

@@ -1,3 +0,0 @@
-## 0.6.20
-
-No user-facing changes.

actions/ql/src/change-notes/released/0.6.21.md

@@ -1,3 +0,0 @@
-## 0.6.21
-
-No user-facing changes.

actions/ql/src/change-notes/released/0.6.22.md

@@ -1,3 +0,0 @@
-## 0.6.22
-
-No user-facing changes.

actions/ql/src/change-notes/released/0.6.23.md

@@ -1,3 +0,0 @@
-## 0.6.23
-
-No user-facing changes.

actions/ql/src/change-notes/released/0.6.24.md

@@ -1,3 +0,0 @@
-## 0.6.24
-
-No user-facing changes.

actions/ql/src/change-notes/released/0.6.25.md

@@ -1,3 +0,0 @@
-## 0.6.25
-
-No user-facing changes.

actions/ql/src/change-notes/released/0.6.26.md

@@ -1,9 +0,0 @@
-## 0.6.26
-
-### Major Analysis Improvements
-
-* Fixed alert messages in `actions/artifact-poisoning/critical` and `actions/artifact-poisoning/medium` as they previously included a redundant placeholder in the alert message that would on occasion contain a long block of yml that makes the alert difficult to understand. Also improved the wording to make it clearer that it is not the artifact that is being poisoned, but instead a potentially untrusted artifact that is consumed. Finally, changed the alert location to be the source, to align more with other queries reporting an artifact (e.g. zipslip) which is more useful.
-
-### Minor Analysis Improvements
-
-* The query `actions/missing-workflow-permissions` no longer produces false positive results on reusable workflows where all callers set permissions.