Merge pull request #12680 from jcogs33/jcogs33/metrics-query-refactor-top500

Java: test GeneratedVsManualCoverage query on top 500 JDK APIs

java/ql/test/ext/TopJdkApis/TopJdkApis.qll

@@ -1,326 +0,0 @@
-/** Provides classes and predicates for working with Top JDK APIs. */
-
-import java
-private import semmle.code.java.dataflow.FlowSummary
-private import semmle.code.java.dataflow.internal.FlowSummaryImpl as FlowSummaryImpl
-private import semmle.code.java.dataflow.ExternalFlow
-
-/** Holds if the given API name is a top JDK API. */
-predicate topJdkApiName(string apiName) {
-  apiName in [
-      // top 100 JDK APIs
-      "java.lang.StringBuilder#append(String)", "java.util.List#get(int)",
-      "java.util.List#add(Object)", "java.util.Map#put(Object,Object)",
-      "java.lang.String#equals(Object)", "java.util.Map#get(Object)", "java.util.List#size()",
-      "java.util.Collection#stream()", "java.lang.Object#getClass()",
-      "java.util.stream.Stream#collect(Collector)", "java.util.Objects#equals(Object,Object)",
-      "java.lang.String#format(String,Object[])", "java.util.stream.Stream#map(Function)",
-      "java.lang.Throwable#getMessage()", "java.util.Arrays#asList(Object[])",
-      "java.lang.String#equalsIgnoreCase(String)", "java.util.List#isEmpty()",
-      "java.util.Set#add(Object)", "java.util.HashMap#put(Object,Object)",
-      "java.util.stream.Collectors#toList()", "java.lang.StringBuilder#append(char)",
-      "java.util.stream.Stream#filter(Predicate)", "java.lang.String#length()",
-      "java.lang.Enum#name()", "java.lang.Object#toString()", "java.util.Optional#get()",
-      "java.lang.StringBuilder#toString()",
-      "java.lang.IllegalArgumentException#IllegalArgumentException(String)",
-      "java.lang.Class#getName()", "java.lang.Enum#Enum(String,int)",
-      "java.io.PrintWriter#write(String)", "java.util.Entry#getValue()", "java.util.Entry#getKey()",
-      "java.util.Iterator#next()", "java.lang.Object#hashCode()",
-      "java.util.Optional#orElse(Object)", "java.lang.StringBuffer#append(String)",
-      "java.util.Collections#singletonList(Object)", "java.lang.Iterable#forEach(Consumer)",
-      "java.util.Optional#of(Object)", "java.lang.String#contains(CharSequence)",
-      "java.util.ArrayList#add(Object)", "java.util.Optional#ofNullable(Object)",
-      "java.util.Collections#emptyList()", "java.math.BigDecimal#BigDecimal(String)",
-      "java.lang.System#currentTimeMillis()", "java.lang.Object#equals(Object)",
-      "java.util.Map#containsKey(Object)", "java.util.Optional#isPresent()",
-      "java.lang.String#trim()", "java.util.List#addAll(Collection)",
-      "java.util.Set#contains(Object)", "java.util.Optional#map(Function)",
-      "java.util.Map#entrySet()", "java.util.Optional#empty()",
-      "java.lang.Integer#parseInt(String)", "java.lang.String#startsWith(String)",
-      "java.lang.IllegalStateException#IllegalStateException(String)",
-      "java.lang.Enum#equals(Object)", "java.util.Iterator#hasNext()",
-      "java.util.List#contains(Object)", "java.lang.String#substring(int,int)",
-      "java.util.List#of(Object)", "java.util.Objects#hash(Object[])",
-      "java.lang.RuntimeException#RuntimeException(String)", "java.lang.String#isEmpty()",
-      "java.lang.String#replace(CharSequence,CharSequence)", "java.util.Set#size()",
-      "java.io.File#File(String)", "java.lang.StringBuilder#append(Object)",
-      "java.lang.String#split(String)", "java.util.Map#values()", "java.util.UUID#randomUUID()",
-      "java.util.ArrayList#ArrayList(Collection)", "java.util.Map#keySet()",
-      "java.sql.ResultSet#getString(String)", "java.lang.String#hashCode()",
-      "java.lang.Throwable#Throwable(Throwable)", "java.util.HashMap#get(Object)",
-      "java.lang.Class#getSimpleName()", "java.util.Set#isEmpty()", "java.util.Map#size()",
-      "java.lang.String#substring(int)", "java.util.Map#remove(Object)",
-      "java.lang.Throwable#printStackTrace()", "java.util.stream.Stream#findFirst()",
-      "java.util.Optional#ifPresent(Consumer)", "java.lang.String#valueOf(Object)",
-      "java.lang.String#toLowerCase()", "java.util.UUID#toString()",
-      "java.lang.StringBuilder#append(int)", "java.util.Objects#requireNonNull(Object,String)",
-      "java.nio.file.Path#resolve(String)", "java.lang.Enum#toString()",
-      "java.lang.RuntimeException#RuntimeException(Throwable)", "java.util.Collection#size()",
-      "java.lang.String#charAt(int)", "java.util.stream.Stream#forEach(Consumer)",
-      "java.util.Map#isEmpty()", "java.lang.String#valueOf(int)",
-      // top 200 JDK APIs
-      "java.lang.Integer#intValue()", "java.util.ArrayList#size()",
-      "java.util.ArrayList#ArrayList(int)", "java.util.function.Function#apply(Object)",
-      "java.util.stream.Stream#forEach(Consumer)", "java.util.ArrayList#get(int)",
-      "java.util.Set#iterator()", "java.util.stream.Collectors#toSet()",
-      "java.lang.String#replaceAll(String,String)", "java.lang.String#getBytes(Charset)",
-      "java.util.Objects#requireNonNull(Object)", "java.util.Objects#nonNull(Object)",
-      "java.lang.String#endsWith(String)", "java.lang.AbstractStringBuilder#length()",
-      "java.sql.PreparedStatement#setString(int,String)",
-      "java.util.regex.Pattern#matcher(CharSequence)", "java.nio.file.Path#toString()",
-      "java.time.Instant#now()", "java.io.File#getAbsolutePath()",
-      "java.util.Set#addAll(Collection)", "java.lang.Integer#valueOf(int)",
-      "java.util.HashSet#HashSet(Collection)", "java.lang.Integer#toString(int)",
-      "java.lang.StringBuilder#StringBuilder(String)", "java.lang.Thread#sleep(long)",
-      "java.lang.Thread#currentThread()", "java.util.Date#getTime()",
-      "java.io.Writer#write(String)", "java.lang.String#getBytes()", "java.io.File#exists()",
-      "java.lang.String#toUpperCase()", "java.lang.Long#parseLong(String)",
-      "java.util.Collections#emptyMap()", "java.util.Optional#orElseThrow(Supplier)",
-      "java.util.List#of(Object,Object)", "java.util.concurrent.CountDownLatch#countDown()",
-      "java.lang.Class#isAssignableFrom(Class)",
-      "java.lang.IndexOutOfBoundsException#IndexOutOfBoundsException(String)",
-      "java.lang.Throwable#getCause()", "java.util.Arrays#stream(Object[])",
-      "java.util.function.Supplier#get()", "java.lang.Exception#Exception(String)",
-      "java.util.function.Consumer#accept(Object)", "java.util.stream.Stream#anyMatch(Predicate)",
-      "java.util.List#clear()", "java.io.File#File(File,String)",
-      "java.lang.String#indexOf(String)", "java.util.List#iterator()",
-      "java.util.concurrent.CountDownLatch#CountDownLatch(int)", "java.sql.ResultSet#next()",
-      "java.sql.PreparedStatement#setInt(int,int)",
-      "java.util.concurrent.atomic.AtomicInteger#get()",
-      "java.util.stream.Collectors#toMap(Function,Function)", "java.lang.Math#min(int,int)",
-      "java.lang.Long#equals(Object)", "java.util.Properties#setProperty(String,String)",
-      "java.util.Map#getOrDefault(Object,Object)", "java.lang.System#getProperty(String)",
-      "java.util.stream.Stream#of(Object[])", "java.nio.file.Paths#get(String,String[])",
-      "java.math.BigDecimal#compareTo(BigDecimal)", "java.math.BigDecimal#valueOf(long)",
-      "java.lang.RuntimeException#RuntimeException(String,Throwable)",
-      "java.util.Collection#add(Object)", "java.util.Collections#emptySet()",
-      "java.util.stream.Stream#flatMap(Function)",
-      "java.util.concurrent.atomic.AtomicReference#get()", "java.util.Collection#isEmpty()",
-      "java.lang.StringBuffer#toString()", "java.util.Collections#singleton(Object)",
-      "java.io.File#getName()", "java.time.ZonedDateTime#now()",
-      "java.io.ByteArrayInputStream#ByteArrayInputStream(byte[])", "java.nio.file.Path#toFile()",
-      "java.util.Date#Date(long)", "java.lang.System#nanoTime()",
-      "java.util.Hashtable#put(Object,Object)", "java.util.Map#putAll(Map)",
-      "java.lang.Long#toString()", "java.util.List#toArray(Object[])", "java.io.File#toPath()",
-      "java.util.regex.Matcher#group(int)", "java.time.LocalDate#of(int,int,int)",
-      "java.lang.String#valueOf(long)", "java.math.BigDecimal#valueOf(double)",
-      "java.io.IOException#IOException(String)", "java.text.DateFormat#format(Date)",
-      "java.sql.ResultSet#getInt(String)", "java.util.Map#clear()", "java.util.HashSet#add(Object)",
-      "java.lang.Class#getClassLoader()", "java.lang.Boolean#equals(Object)",
-      "java.lang.String#concat(String)", "java.util.Collections#singletonMap(Object,Object)",
-      "java.util.Collection#iterator()", "java.util.Map#computeIfAbsent(Object,Function)",
-      "java.text.SimpleDateFormat#SimpleDateFormat(String)",
-      "java.util.StringJoiner#add(CharSequence)", "java.lang.Long#longValue()",
-      "java.util.stream.Collectors#joining(CharSequence)",
-      // top 300 JDK APIs
-      "java.lang.Math#max(int,int)", "java.util.Map#of(Object,Object)",
-      "java.lang.Long#valueOf(long)", "java.util.Random#nextInt(int)",
-      "java.lang.Long#valueOf(String)", "java.util.concurrent.CountDownLatch#await(long,TimeUnit)",
-      "java.util.Properties#getProperty(String)", "java.util.Optional#isEmpty()",
-      "java.util.concurrent.CompletableFuture#get()", "java.util.Objects#isNull(Object)",
-      "java.lang.StringBuilder#append(long)", "java.awt.Container#add(Component,Object)",
-      "java.math.BigDecimal#add(BigDecimal)", "java.sql.PreparedStatement#executeQuery()",
-      "java.lang.StringBuilder#StringBuilder(int)", "java.util.Map#forEach(BiConsumer)",
-      "java.math.BigDecimal#BigDecimal(int)", "java.util.Collections#unmodifiableList(List)",
-      "java.util.Properties#put(Object,Object)", "java.sql.Timestamp#Timestamp(long)",
-      "java.util.List#equals(Object)", "java.lang.String#indexOf(int)",
-      "java.lang.Long#toString(long)", "java.lang.Integer#Integer(int)",
-      "java.util.concurrent.atomic.AtomicBoolean#get()",
-      "java.lang.System#setProperty(String,String)", "java.util.concurrent.Future#get()",
-      "java.lang.Thread#start()", "java.util.Set#of(Object)", "java.util.Calendar#set(int,int)",
-      "java.time.Duration#ofSeconds(long)", "java.lang.System#arraycopy(Object,int,Object,int,int)",
-      "java.net.URI#toString()", "java.util.concurrent.atomic.AtomicInteger#incrementAndGet()",
-      "java.util.Set#remove(Object)", "java.lang.Boolean#parseBoolean(String)",
-      "java.util.Calendar#getTime()", "java.nio.charset.Charset#name()",
-      "java.lang.ThreadLocal#get()", "java.lang.Class#getCanonicalName()",
-      "java.util.List#remove(Object)", "java.lang.Throwable#toString()",
-      "java.util.stream.Stream#toList()", "java.io.ByteArrayOutputStream#toByteArray()",
-      "java.util.concurrent.atomic.AtomicLong#get()",
-      "java.lang.NullPointerException#NullPointerException(String)", "java.util.List#of()",
-      "java.util.Calendar#getInstance()", "java.util.Calendar#get(int)",
-      "java.util.Optional#orElseThrow()", "java.lang.System#lineSeparator()",
-      "java.lang.Boolean#booleanValue()", "java.util.logging.Logger#isLoggable(Level)",
-      "java.lang.Enum#hashCode()", "java.util.List#hashCode()",
-      "java.lang.reflect.Method#invoke(Object,Object[])", "java.lang.String#String(byte[],Charset)",
-      "java.util.Comparator#comparing(Function)", "java.util.Arrays#toString(Object[])",
-      "java.time.LocalDate#now()", "java.util.function.Function#identity()",
-      "java.io.OutputStream#write(byte[])", "java.lang.Integer#equals(Object)",
-      "java.io.BufferedReader#BufferedReader(Reader)", "java.io.DataInput#readInt()",
-      "java.io.BufferedReader#readLine()", "java.util.Map#entry(Object,Object)",
-      "java.lang.Runnable#run()", "java.util.ResourceBundle#getString(String)",
-      "java.util.Iterator#remove()", "java.lang.String#join(CharSequence,Iterable)",
-      "java.util.concurrent.atomic.AtomicBoolean#set(boolean)", "java.time.LocalDateTime#now()",
-      "java.sql.ResultSet#getLong(String)", "java.text.DateFormat#parse(String)",
-      "java.lang.String#toString()", "java.lang.Integer#valueOf(String)",
-      "java.util.regex.Matcher#find()", "java.io.DataOutput#writeInt(int)",
-      "java.util.HashMap#HashMap(int)", "java.util.stream.Stream#sorted(Comparator)",
-      "java.lang.String#toCharArray()",
-      "java.util.concurrent.atomic.AtomicInteger#AtomicInteger(int)",
-      "java.lang.String#String(byte[])", "java.lang.reflect.Method#getName()",
-      "java.sql.ResultSet#getString(int)", "java.net.URI#create(String)",
-      "java.lang.Enum#ordinal()", "java.util.concurrent.atomic.AtomicReference#set(Object)",
-      "java.util.concurrent.CompletableFuture#join()",
-      "java.io.FileInputStream#FileInputStream(File)", "java.io.File#delete()",
-      "java.util.concurrent.TimeUnit#toMillis(long)", "java.util.List#of(Object,Object,Object)",
-      "java.lang.String#compareTo(String)", "java.util.stream.IntStream#range(int,int)",
-      "java.math.BigInteger#valueOf(long)", "java.util.List#remove(int)",
-      "java.util.HashMap#HashMap(Map)", "java.util.function.BiConsumer#accept(Object,Object)",
-      // top 400 JDK APIs
-      "java.util.HashMap#containsKey(Object)", "java.util.Collection#contains(Object)",
-      "java.lang.Double#parseDouble(String)", "java.lang.Thread#interrupt()",
-      "java.awt.Container#add(Component)", "java.time.chrono.ChronoZonedDateTime#toInstant()",
-      "java.util.List#subList(int,int)", "java.util.concurrent.ConcurrentHashMap#get(Object)",
-      "java.lang.System#getenv(String)", "java.time.Duration#ofMillis(long)",
-      "java.lang.Integer#toString()", "java.lang.reflect.Constructor#newInstance(Object[])",
-      "java.util.Hashtable#get(Object)", "java.lang.Class#toString()",
-      "java.util.Vector#add(Object)", "java.io.StringReader#StringReader(String)",
-      "java.io.File#getPath()", "java.lang.System#identityHashCode(Object)",
-      "java.util.stream.Stream#count()", "java.util.concurrent.CompletableFuture#complete(Object)",
-      "java.nio.file.Files#exists(Path,LinkOption[])", "java.util.List#set(int,Object)",
-      "java.util.concurrent.atomic.AtomicLong#AtomicLong(long)",
-      "java.util.Optional#orElseGet(Supplier)", "java.lang.Class#forName(String)",
-      "java.lang.String#replace(char,char)", "java.util.Enumeration#nextElement()",
-      "java.lang.Class#getMethod(String,Class[])", "java.nio.file.Path#toAbsolutePath()",
-      "java.util.Enumeration#hasMoreElements()", "java.lang.Class#cast(Object)",
-      "java.util.concurrent.atomic.AtomicBoolean#AtomicBoolean(boolean)",
-      "java.math.BigDecimal#doubleValue()", "java.util.UUID#fromString(String)",
-      "java.lang.System#exit(int)", "java.util.List#add(int,Object)",
-      "java.lang.Boolean#valueOf(boolean)", "java.sql.Timestamp#getTime()",
-      "java.nio.Buffer#remaining()", "java.net.URL#URL(String)", "java.net.URI#URI(String)",
-      "java.util.Objects#hashCode(Object)", "java.util.Set#clear()", "java.io.File#isDirectory()",
-      "java.time.Duration#toMillis()", "java.nio.ByteBuffer#allocate(int)",
-      "java.math.BigDecimal#toString()", "java.lang.Class#getResourceAsStream(String)",
-      "java.util.logging.Logger#getLogger(String)", "java.lang.String#toLowerCase(Locale)",
-      "java.util.concurrent.CompletableFuture#completeExceptionally(Throwable)",
-      "java.util.stream.Stream#findAny()",
-      "java.util.concurrent.CompletableFuture#completedFuture(Object)",
-      "java.util.stream.Stream#of(Object)", "java.util.Map#of(Object,Object,Object,Object)",
-      "java.util.Collections#sort(List,Comparator)", "java.lang.Thread#Thread(Runnable)",
-      "java.lang.String#lastIndexOf(int)",
-      "java.io.UncheckedIOException#UncheckedIOException(IOException)",
-      "java.util.LinkedHashSet#LinkedHashSet(Collection)",
-      "java.sql.PreparedStatement#executeUpdate()", "java.time.ZoneId#of(String)",
-      "java.util.concurrent.atomic.AtomicLong#addAndGet(long)", "java.nio.ByteBuffer#wrap(byte[])",
-      "java.util.List#indexOf(Object)", "java.util.Collections#unmodifiableMap(Map)",
-      "java.lang.Long#Long(long)", "java.util.StringTokenizer#nextToken()",
-      "java.lang.String#join(CharSequence,CharSequence[])", "java.io.StringWriter#toString()",
-      "java.lang.Integer#toHexString(int)", "java.lang.Long#intValue()",
-      "java.text.MessageFormat#format(String,Object[])",
-      "java.lang.Exception#Exception(String,Throwable)",
-      "java.util.stream.Stream#toArray(IntFunction)", "java.util.List#sort(Comparator)",
-      "java.util.LinkedHashMap#get(Object)", "java.sql.PreparedStatement#setLong(int,long)",
-      "java.lang.Iterable#iterator()", "java.math.BigInteger#or(BigInteger)",
-      "java.time.LocalDateTime#of(int,int,int,int,int,int)", "java.time.Instant#toEpochMilli()",
-      "java.math.BigDecimal#setScale(int,RoundingMode)", "java.lang.Class#isInstance(Object)",
-      "java.util.regex.Pattern#compile(String)", "java.util.Calendar#getTimeInMillis()",
-      "java.lang.Class#getResource(String)", "java.util.concurrent.Executor#execute(Runnable)",
-      "java.util.concurrent.locks.Lock#unlock()", "java.lang.AssertionError#AssertionError(Object)",
-      "java.util.ArrayList#addAll(Collection)", "java.io.File#mkdirs()",
-      "java.time.Duration#ofMinutes(long)", "java.time.format.DateTimeFormatter#ofPattern(String)",
-      "java.lang.Throwable#getLocalizedMessage()", "java.lang.StringBuilder#delete(int,int)",
-      "java.util.Vector#size()", "java.lang.String#String(String)", "java.util.ArrayList#isEmpty()",
-      "java.util.Collection#removeIf(Predicate)",
-      // top 500 JDK APIs
-      "java.util.HashSet#HashSet(int)", "java.util.Set#of(Object,Object)",
-      "java.util.Collections#unmodifiableSet(Set)", "java.sql.Connection#createStatement()",
-      "java.math.BigDecimal#subtract(BigDecimal)", "java.util.Date#from(Instant)",
-      "java.lang.StringBuffer#append(char)", "java.util.Locale#forLanguageTag(String)",
-      "java.io.DataInput#readLong()", "java.util.Collections#sort(List)",
-      "java.io.DataOutput#writeLong(long)", "java.util.function.BiFunction#apply(Object,Object)",
-      "java.lang.String#lastIndexOf(String)", "java.util.Optional#filter(Predicate)",
-      "java.lang.StringBuffer#append(Object)", "java.io.File#getParentFile()",
-      "java.util.stream.Stream#allMatch(Predicate)", "java.sql.ResultSet#getTimestamp(String)",
-      "java.util.Calendar#setTime(Date)",
-      "java.util.concurrent.CompletionStage#toCompletableFuture()",
-      "java.util.concurrent.locks.Lock#lock()", "java.lang.reflect.Field#get(Object)",
-      "java.io.InputStream#close()", "java.math.BigInteger#BigInteger(String)",
-      "java.lang.Class#getDeclaredField(String)",
-      "java.io.InputStreamReader#InputStreamReader(InputStream)", "java.lang.Runtime#getRuntime()",
-      "java.lang.Class#getDeclaredConstructor(Class[])",
-      "java.lang.AbstractStringBuilder#setLength(int)", "java.nio.Buffer#position()",
-      "java.nio.file.Path#getFileName()", "java.util.List#toArray()",
-      "java.lang.CharSequence#length()", "java.util.stream.Stream#distinct()",
-      "java.net.URL#toURI()", "java.util.Queue#poll()", "java.lang.Thread#getContextClassLoader()",
-      "java.lang.String#valueOf(boolean)", "java.util.Calendar#add(int,int)",
-      "java.util.HashMap#entrySet()", "java.util.stream.IntStream#mapToObj(IntFunction)",
-      "java.util.concurrent.atomic.AtomicLong#incrementAndGet()",
-      "java.util.concurrent.ExecutorService#shutdown()",
-      "java.util.concurrent.ExecutorService#submit(Runnable)", "java.math.BigDecimal#intValue()",
-      "java.math.BigDecimal#toBigInteger()", "java.util.LinkedList#add(Object)",
-      "java.lang.AbstractStringBuilder#charAt(int)", "java.lang.Thread#getName()",
-      "java.lang.Math#max(long,long)", "java.util.HashMap#size()",
-      "java.time.LocalDate#plusDays(long)", "java.nio.ByteBuffer#array()",
-      "java.lang.StringBuilder#append(CharSequence)", "java.util.Vector#addElement(Object)",
-      "java.lang.ClassLoader#getResource(String)", "java.awt.Insets#Insets(int,int,int,int)",
-      "java.util.TimeZone#getTimeZone(String)", "java.time.ZoneId#systemDefault()",
-      "java.lang.Number#doubleValue()", "java.util.stream.Stream#reduce(Object,BinaryOperator)",
-      "java.lang.CharSequence#toString()", "java.time.Instant#parse(CharSequence)",
-      "java.text.Format#format(Object)", "java.io.File#toURI()", "java.sql.ResultSet#getInt(int)",
-      "java.lang.Number#longValue()", "java.lang.Double#doubleToLongBits(double)",
-      "java.lang.Math#min(long,long)", "java.lang.Double#valueOf(double)",
-      "java.lang.invoke.MethodHandles#lookup()", "java.util.concurrent.CompletableFuture#isDone()",
-      "java.time.LocalDate#parse(CharSequence)", "java.lang.StringBuilder#append(boolean)",
-      "java.util.concurrent.CountDownLatch#await()",
-      "java.util.concurrent.ConcurrentHashMap#put(Object,Object)",
-      "java.util.stream.Stream#mapToInt(ToIntFunction)",
-      "java.math.BigDecimal#multiply(BigDecimal)", "java.util.stream.Stream#concat(Stream,Stream)",
-      "java.time.Instant#ofEpochMilli(long)", "java.nio.file.Path#getParent()",
-      "java.util.stream.Stream#sorted()",
-      "java.util.concurrent.atomic.AtomicBoolean#compareAndSet(boolean,boolean)",
-      "java.util.UUID#equals(Object)", "java.io.OutputStream#flush()",
-      "java.time.format.DateTimeFormatter#format(TemporalAccessor)", "java.io.Closeable#close()",
-      "java.util.EventObject#getSource()", "java.io.File#File(String,String)",
-      "java.lang.Number#intValue()", "java.io.File#length()",
-      "java.lang.AbstractStringBuilder#setCharAt(int,char)", "java.util.Set#removeAll(Collection)",
-      "java.io.File#listFiles()", "java.lang.ClassLoader#getResourceAsStream(String)",
-      "java.util.Date#toInstant()", "java.util.Queue#add(Object)", "java.io.File#isFile()",
-      "java.sql.Statement#close()", "java.io.DataOutput#writeBoolean(boolean)"
-    ]
-}
-
-/** Holds if `c` has the MaD-formatted name `apiName`. */
-predicate hasApiName(Callable c, string apiName) {
-  apiName =
-    c.getDeclaringType().getPackage() + "." + c.getDeclaringType().getSourceDeclaration() + "#" +
-      c.getName() + paramsString(c)
-}
-
-/** A top JDK API. */
-class TopJdkApi extends SummarizedCallableBase {
-  TopJdkApi() {
-    exists(string apiName |
-      hasApiName(this.asCallable(), apiName) and
-      topJdkApiName(apiName)
-    )
-  }
-
-  /** Holds if this API has a manual summary model. */
-  private predicate hasManualSummary() { this.(SummarizedCallable).isManual() }
-
-  /** Holds if this API has a manual neutral model. */
-  private predicate hasManualNeutral() {
-    this.(FlowSummaryImpl::Public::NeutralCallable).isManual()
-  }
-
-  /** Holds if this API has a manual MaD model. */
-  predicate hasManualMadModel() { this.hasManualSummary() or this.hasManualNeutral() }
-  /*
-   * Note: the following top JDK APIs are not modeled with MaD:
-   * `java.lang.String#valueOf(Object)`: a complex case; an alias for `Object.toString`, except the dispatch is hidden
-   * `java.lang.System#getProperty(String)`: needs to be modeled by regular CodeQL matching the get and set keys to reduce FPs
-   * `java.lang.System#setProperty(String,String)`: needs to be modeled by regular CodeQL matching the get and set keys to reduce FPs
-   * `java.lang.Throwable#printStackTrace()`: should probably not be a general step, but there might be specialised queries that care
-   * `java.text.Format#format(Object)`: similar issue as `Object.toString`; depends on the object being passed as the argument
-   * `java.text.MessageFormat#format(String,Object[])`: similar issue as `Object.toString`; depends on the object being passed as the argument
-   * `java.util.Comparator#comparing(Function)`: lambda flow
-   * `java.util.function.BiConsumer#accept(Object,Object)`: specialized lambda flow
-   * `java.util.function.BiFunction#apply(Object,Object)`: specialized lambda flow
-   * `java.util.function.Consumer#accept(Object)`: specialized lambda flow
-   * `java.util.function.Function#apply(Object)`: specialized lambda flow
-   * `java.util.function.Supplier#get()`: lambda flow
-   * `java.util.stream.Collectors#joining(CharSequence)`: cannot be modeled completely without a model for `java.util.stream.Stream#collect(Collector)` as well
-   * `java.util.stream.Collectors#toMap(Function,Function)`: specialized collectors flow
-   * `java.util.stream.Stream#collect(Collector)`: handled separately on a case-by-case basis as it is too complex for MaD
-   */
-
-  }

java/ql/test/ext/TopJdkApis/TopJdkApisTest.ql

@@ -1,5 +1,5 @@
 import java
-import TopJdkApis
+import Metrics.Summaries.TopJdkApis
 
 from string apiName, string message
 where

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/awt/Container.java

@@ -0,0 +1,29 @@
+// Generated automatically from java.awt.Container for testing purposes
+
+package java.awt;
+
+import java.awt.AWTEvent;
+import java.awt.AWTKeyStroke;
+import java.awt.Component;
+import java.awt.ComponentOrientation;
+import java.awt.Dimension;
+import java.awt.Event;
+import java.awt.FocusTraversalPolicy;
+import java.awt.Font;
+import java.awt.Graphics;
+import java.awt.Insets;
+import java.awt.LayoutManager;
+import java.awt.Point;
+import java.awt.event.ContainerEvent;
+import java.awt.event.ContainerListener;
+import java.beans.PropertyChangeListener;
+import java.io.PrintStream;
+import java.io.PrintWriter;
+import java.util.EventListener;
+import java.util.Set;
+
+public class Container extends Component
+{
+    public Component add(Component p0){ return null; } // manual summary
+    public void add(Component p0, Object p1){} // manual summary
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/awt/Insets.java

@@ -0,0 +1,11 @@
+// Generated automatically from java.awt.Insets for testing purposes
+
+package java.awt;
+
+import java.io.Serializable;
+
+public class Insets implements Cloneable, Serializable
+{
+    protected Insets() {}
+    public Insets(int p0, int p1, int p2, int p3){} // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/io/BufferedReader.java

@@ -0,0 +1,13 @@
+// Generated automatically from java.io.BufferedReader for testing purposes
+
+package java.io;
+
+import java.io.Reader;
+import java.util.stream.Stream;
+
+public class BufferedReader
+{
+    protected BufferedReader() {}
+    public BufferedReader(Reader p0){} // manual summary
+    public String readLine(){ return null; } // manual summary
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/io/ByteArrayInputStream.java

@@ -0,0 +1,11 @@
+// Generated automatically from java.io.ByteArrayInputStream for testing purposes
+
+package java.io;
+
+import java.io.InputStream;
+
+public class ByteArrayInputStream
+{
+    protected ByteArrayInputStream() {}
+    public ByteArrayInputStream(byte[] p0){} // manual summary
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/io/ByteArrayOutputStream.java

@@ -0,0 +1,10 @@
+// Generated automatically from java.io.ByteArrayOutputStream for testing purposes
+
+package java.io;
+
+import java.io.OutputStream;
+
+public class ByteArrayOutputStream
+{
+    public byte[] toByteArray(){ return null; } // manual summary
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/io/Closeable.java

@@ -0,0 +1,9 @@
+// Generated automatically from java.io.Closeable for testing purposes
+
+package java.io;
+
+
+public interface Closeable extends AutoCloseable
+{
+    void close(); // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/io/DataInput.java

@@ -0,0 +1,10 @@
+// Generated automatically from java.io.DataInput for testing purposes
+
+package java.io;
+
+
+public interface DataInput
+{
+    int readInt(); // manual neutral
+    long readLong(); // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/io/DataOutput.java

@@ -0,0 +1,11 @@
+// Generated automatically from java.io.DataOutput for testing purposes
+
+package java.io;
+
+
+public interface DataOutput
+{
+    void writeBoolean(boolean p0); // manual neutral
+    void writeInt(int p0); // manual neutral
+    void writeLong(long p0); // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/io/File.java

@@ -0,0 +1,31 @@
+// Generated automatically from java.io.File for testing purposes
+
+package java.io;
+
+import java.io.FileFilter;
+import java.io.FilenameFilter;
+import java.io.Serializable;
+import java.net.URI;
+import java.net.URL;
+import java.nio.file.Path;
+
+public class File implements Serializable
+{
+    protected File() {}
+    public File getParentFile(){ return null; } // manual summary
+    public File(File p0, String p1){} // manual summary
+    public File(String p0){} // manual summary
+    public File(String p0, String p1){} // manual summary
+    public File[] listFiles(){ return null; } // manual summary
+    public Path toPath(){ return null; } // manual summary
+    public String getAbsolutePath(){ return null; } // manual summary
+    public String getName(){ return null; } // manual summary
+    public String getPath(){ return null; } // manual summary
+    public URI toURI(){ return null; } // manual summary
+    public boolean delete(){ return false; } // manual neutral
+    public boolean exists(){ return false; } // manual neutral
+    public boolean isDirectory(){ return false; } // manual neutral
+    public boolean isFile(){ return false; } // manual neutral
+    public boolean mkdirs(){ return false; } // manual neutral
+    public long length(){ return 0; } // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/io/FileInputStream.java

@@ -0,0 +1,14 @@
+// Generated automatically from java.io.FileInputStream for testing purposes
+
+package java.io;
+
+import java.io.File;
+import java.io.FileDescriptor;
+import java.io.InputStream;
+import java.nio.channels.FileChannel;
+
+public class FileInputStream extends InputStream
+{
+    protected FileInputStream() {}
+    public FileInputStream(File p0){} // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/io/IOException.java

@@ -0,0 +1,9 @@
+// Generated automatically from java.io.IOException for testing purposes
+
+package java.io;
+
+
+public class IOException
+{
+    public IOException(String p0){} // manual summary
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/io/InputStream.java

@@ -0,0 +1,10 @@
+// Generated automatically from java.io.InputStream for testing purposes
+
+package java.io;
+
+import java.io.Closeable;
+
+abstract public class InputStream implements Closeable
+{
+    public void close(){} // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/io/InputStreamReader.java

@@ -0,0 +1,14 @@
+// Generated automatically from java.io.InputStreamReader for testing purposes
+
+package java.io;
+
+import java.io.InputStream;
+import java.io.Reader;
+import java.nio.charset.Charset;
+import java.nio.charset.CharsetDecoder;
+
+public class InputStreamReader
+{
+    protected InputStreamReader() {}
+    public InputStreamReader(InputStream p0){} // manual summary
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/io/OutputStream.java

@@ -0,0 +1,12 @@
+// Generated automatically from java.io.OutputStream for testing purposes
+
+package java.io;
+
+import java.io.Closeable;
+import java.io.Flushable;
+
+abstract public class OutputStream implements Closeable, Flushable
+{
+    public void flush(){} // manual neutral
+    public void write(byte[] p0){} // manual summary
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/io/PrintWriter.java

@@ -0,0 +1,22 @@
+// Generated automatically from java.io.PrintWriter for testing purposes
+
+package java.io;
+
+import java.io.File;
+import java.io.OutputStream;
+import java.io.Writer;
+import java.util.Locale;
+
+public class PrintWriter extends Writer
+{
+    protected PrintWriter() {}
+    public void write(String p0){} // manual summary
+
+    // including the below to prevent extraction errors
+    public PrintWriter append(char c) { return null; }
+    public PrintWriter append(CharSequence csq, int start, int end) { return null; }
+    public PrintWriter append(CharSequence csq) { return null; }
+    public void close() {}
+    public void flush() {}
+
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/io/StringReader.java

@@ -0,0 +1,11 @@
+// Generated automatically from java.io.StringReader for testing purposes
+
+package java.io;
+
+import java.io.Reader;
+
+public class StringReader
+{
+    protected StringReader() {}
+    public StringReader(String p0){} // manual summary
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/io/StringWriter.java

@@ -0,0 +1,10 @@
+// Generated automatically from java.io.StringWriter for testing purposes
+
+package java.io;
+
+import java.io.Writer;
+
+public class StringWriter
+{
+    public String toString(){ return null; } // manual summary
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/io/UncheckedIOException.java

@@ -0,0 +1,11 @@
+// Generated automatically from java.io.UncheckedIOException for testing purposes
+
+package java.io;
+
+import java.io.IOException;
+
+public class UncheckedIOException
+{
+    protected UncheckedIOException() {}
+    public UncheckedIOException(IOException p0){} // manual summary
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/io/Writer.java

@@ -0,0 +1,11 @@
+// Generated automatically from java.io.Writer for testing purposes
+
+package java.io;
+
+import java.io.Closeable;
+import java.io.Flushable;
+
+abstract public class Writer implements Appendable, Closeable, Flushable
+{
+    public void write(String p0){} // manual summary
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/lang/AbstractStringBuilder.java

@@ -0,0 +1,23 @@
+// Generated automatically from java.lang.AbstractStringBuilder for testing purposes
+
+package java.lang;
+
+
+abstract class AbstractStringBuilder implements Appendable, CharSequence
+{
+    public char charAt(int p0){ return '0'; } // manual summary
+    public int length(){ return 0; } // manual neutral
+    public void setCharAt(int p0, char p1){} // manual neutral, Note: not currently counted by query due to exclusions in `TargetApiSpecific`
+    public void setLength(int p0){} // manual neutral, Note: not currently counted by query due to exclusions in `TargetApiSpecific`
+
+
+    public AbstractStringBuilder append(CharSequence p0){ return null; }
+    public AbstractStringBuilder append(Object p0){ return null; }
+    public AbstractStringBuilder append(String p0){ return null; }
+    public AbstractStringBuilder append(boolean p0){ return null; }
+    public AbstractStringBuilder append(char p0){ return null; }
+    public AbstractStringBuilder append(int p0){ return null; }
+    public AbstractStringBuilder append(long p0){ return null; }
+    public AbstractStringBuilder delete(int p0, int p1){ return null; }
+    public abstract String toString();
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/lang/AssertionError.java

@@ -0,0 +1,9 @@
+// Generated automatically from java.lang.AssertionError for testing purposes
+
+package java.lang;
+
+
+public class AssertionError extends Error
+{
+    public AssertionError(Object p0){} // manual summary
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/lang/Boolean.java

@@ -0,0 +1,14 @@
+// Generated automatically from java.lang.Boolean for testing purposes
+
+package java.lang;
+
+import java.io.Serializable;
+
+public class Boolean implements Serializable
+{
+    protected Boolean() {}
+    public boolean booleanValue(){ return false; } // manual neutral
+    public boolean equals(Object p0){ return false; } // manual neutral
+    public static Boolean valueOf(boolean p0){ return null; } // manual neutral
+    public static boolean parseBoolean(String p0){ return false; } // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/lang/CharSequence.java

@@ -0,0 +1,13 @@
+// Generated automatically from java.lang.CharSequence for testing purposes
+
+package java.lang;
+
+import java.util.stream.IntStream;
+
+public interface CharSequence
+{
+    String toString(); // manual summary
+    int length(); // manual neutral
+
+    char charAt(int index);
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/lang/Class.java

@@ -0,0 +1,36 @@
+// Generated automatically from java.lang.Class for testing purposes
+
+package java.lang;
+
+import java.io.InputStream;
+import java.io.Serializable;
+import java.lang.annotation.Annotation;
+import java.lang.reflect.AnnotatedElement;
+import java.lang.reflect.AnnotatedType;
+import java.lang.reflect.Constructor;
+import java.lang.reflect.Field;
+import java.lang.reflect.GenericDeclaration;
+import java.lang.reflect.Method;
+import java.lang.reflect.Type;
+import java.lang.reflect.TypeVariable;
+import java.net.URL;
+import java.security.ProtectionDomain;
+
+public class Class<T> implements Serializable, Type
+{
+    protected Class() {}
+    public ClassLoader getClassLoader(){ return null; } // manual neutral
+    public Field getDeclaredField(String p0){ return null; } // manual neutral
+    public InputStream getResourceAsStream(String p0){ return null; } // manual neutral
+    public Method getMethod(String p0, Class<? extends Object>... p1){ return null; } // manual neutral
+    public String getCanonicalName(){ return null; } // manual neutral
+    public String getName(){ return null; } // manual neutral
+    public String getSimpleName(){ return null; } // manual neutral
+    public String toString(){ return null; } // manual neutral
+    public T cast(Object p0){ return null; } // manual summary
+    public URL getResource(String p0){ return null; } // manual neutral
+    public boolean isAssignableFrom(Class<? extends Object> p0){ return false; } // manual neutral
+    public boolean isInstance(Object p0){ return false; } // manual neutral
+    public java.lang.reflect.Constructor<T> getDeclaredConstructor(Class<? extends Object>... p0){ return null; } // manual neutral
+    public static Class<? extends Object> forName(String p0){ return null; } // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/lang/ClassLoader.java

@@ -0,0 +1,15 @@
+// Generated automatically from java.lang.ClassLoader for testing purposes
+
+package java.lang;
+
+import java.io.InputStream;
+import java.net.URL;
+import java.nio.ByteBuffer;
+import java.security.ProtectionDomain;
+import java.util.Enumeration;
+
+abstract public class ClassLoader
+{
+    public InputStream getResourceAsStream(String p0){ return null; } // manual neutral
+    public URL getResource(String p0){ return null; } // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/lang/Double.java

@@ -0,0 +1,12 @@
+// Generated automatically from java.lang.Double for testing purposes
+
+package java.lang;
+
+
+public class Double
+{
+    protected Double() {}
+    public static Double valueOf(double p0){ return null; } // manual neutral
+    public static double parseDouble(String p0){ return 0; } // manual neutral
+    public static long doubleToLongBits(double p0){ return 0; } // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/lang/Enum.java

@@ -0,0 +1,16 @@
+// Generated automatically from java.lang.Enum for testing purposes
+
+package java.lang;
+
+import java.io.Serializable;
+
+abstract public class Enum<E extends Enum<E>> implements Comparable<E>, Serializable
+{
+    protected Enum() {}
+    protected Enum(String p0, int p1){} // manual neutral, Note: this will not be counted in query results since `protected` not `public`
+    public String toString(){ return null; } // manual neutral
+    public final String name(){ return null; } // manual neutral
+    public final boolean equals(Object p0){ return false; } // manual neutral
+    public final int hashCode(){ return 0; } // manual neutral
+    public final int ordinal(){ return 0; } // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/lang/Exception.java

@@ -0,0 +1,10 @@
+// Generated automatically from java.lang.Exception for testing purposes
+
+package java.lang;
+
+
+public class Exception
+{
+    public Exception(String p0){} // manual summary
+    public Exception(String p0, Throwable p1){} // manual summary
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/lang/IllegalArgumentException.java

@@ -0,0 +1,9 @@
+// Generated automatically from java.lang.IllegalArgumentException for testing purposes
+
+package java.lang;
+
+
+public class IllegalArgumentException
+{
+    public IllegalArgumentException(String p0){} // manual summary
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/lang/IllegalStateException.java

@@ -0,0 +1,9 @@
+// Generated automatically from java.lang.IllegalStateException for testing purposes
+
+package java.lang;
+
+
+public class IllegalStateException
+{
+    public IllegalStateException(String p0){} // manual summary
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/lang/IndexOutOfBoundsException.java

@@ -0,0 +1,9 @@
+// Generated automatically from java.lang.IndexOutOfBoundsException for testing purposes
+
+package java.lang;
+
+
+public class IndexOutOfBoundsException
+{
+    public IndexOutOfBoundsException(String p0){} // manual summary
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/lang/Integer.java

@@ -0,0 +1,18 @@
+// Generated automatically from java.lang.Integer for testing purposes
+
+package java.lang;
+
+
+public class Integer
+{
+    protected Integer() {}
+    public Integer(int p0){} // manual neutral
+    public String toString(){ return null; } // manual neutral
+    public boolean equals(Object p0){ return false; } // manual neutral
+    public int intValue(){ return 0; } // manual neutral
+    public static Integer valueOf(String p0){ return null; } // manual neutral
+    public static Integer valueOf(int p0){ return null; } // manual neutral
+    public static String toHexString(int p0){ return null; } // manual neutral
+    public static String toString(int p0){ return null; } // manual neutral
+    public static int parseInt(String p0){ return 0; } // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/lang/Iterable.java

@@ -0,0 +1,13 @@
+// Generated automatically from java.lang.Iterable for testing purposes
+
+package java.lang;
+
+import java.util.Iterator;
+import java.util.Spliterator;
+import java.util.function.Consumer;
+
+public interface Iterable<T>
+{
+    default void forEach(java.util.function.Consumer<? super T> p0){} // manual summary
+    java.util.Iterator<T> iterator(); // manual summary
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/lang/Long.java

@@ -0,0 +1,18 @@
+// Generated automatically from java.lang.Long for testing purposes
+
+package java.lang;
+
+
+public class Long
+{
+    protected Long() {}
+    public Long(long p0){} // manual neutral
+    public String toString(){ return null; } // manual neutral
+    public boolean equals(Object p0){ return false; } // manual neutral
+    public int intValue(){ return 0; } // manual neutral
+    public long longValue(){ return 0; } // manual neutral
+    public static Long valueOf(String p0){ return null; } // manual neutral
+    public static Long valueOf(long p0){ return null; } // manual neutral
+    public static String toString(long p0){ return null; } // manual neutral
+    public static long parseLong(String p0){ return 0; } // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/lang/Math.java

@@ -0,0 +1,13 @@
+// Generated automatically from java.lang.Math for testing purposes
+
+package java.lang;
+
+
+public class Math
+{
+    protected Math() {}
+    public static int max(int p0, int p1){ return 0; } // manual neutral
+    public static int min(int p0, int p1){ return 0; } // manual neutral
+    public static long max(long p0, long p1){ return 0; } // manual neutral
+    public static long min(long p0, long p1){ return 0; } // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/lang/NullPointerException.java

@@ -0,0 +1,9 @@
+// Generated automatically from java.lang.NullPointerException for testing purposes
+
+package java.lang;
+
+
+public class NullPointerException
+{
+    public NullPointerException(String p0){} // manual summary
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/lang/Number.java

@@ -0,0 +1,12 @@
+// Generated automatically from java.lang.Number for testing purposes
+
+package java.lang;
+
+import java.io.Serializable;
+
+abstract public class Number implements Serializable
+{
+    public abstract double doubleValue(); // manual neutral
+    public abstract int intValue(); // manual neutral
+    public abstract long longValue(); // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/lang/Object.java

@@ -0,0 +1,12 @@
+// Generated automatically from java.lang.Object for testing purposes
+
+package java.lang;
+
+
+public class Object
+{
+    public String toString(){ return null; } // manual neutral
+    public boolean equals(Object p0){ return false; } // manual neutral
+    public final Class<? extends Object> getClass(){ return null; } // manual neutral
+    public int hashCode(){ return 0; } // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/lang/Runnable.java

@@ -0,0 +1,9 @@
+// Generated automatically from java.lang.Runnable for testing purposes
+
+package java.lang;
+
+
+public interface Runnable
+{
+    void run(); // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/lang/Runtime.java

@@ -0,0 +1,13 @@
+// Generated automatically from java.lang.Runtime for testing purposes
+
+package java.lang;
+
+import java.io.File;
+import java.io.InputStream;
+import java.io.OutputStream;
+
+public class Runtime
+{
+    protected Runtime() {}
+    public static Runtime getRuntime(){ return null; } // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/lang/RuntimeException.java

@@ -0,0 +1,11 @@
+// Generated automatically from java.lang.RuntimeException for testing purposes
+
+package java.lang;
+
+
+public class RuntimeException
+{
+    public RuntimeException(String p0){} // manual summary
+    public RuntimeException(String p0, Throwable p1){} // manual summary
+    public RuntimeException(Throwable p0){} // manual summary
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/lang/String.java

@@ -0,0 +1,51 @@
+// Generated automatically from java.lang.String for testing purposes
+
+package java.lang;
+
+import java.io.Serializable;
+import java.nio.charset.Charset;
+import java.util.Comparator;
+import java.util.Locale;
+
+public class String implements CharSequence, Comparable<String>, Serializable
+{
+    public String concat(String p0){ return null; } // manual summary
+    public String replace(CharSequence p0, CharSequence p1){ return null; } // manual summary
+    public String replace(char p0, char p1){ return null; } // manual summary
+    public String replaceAll(String p0, String p1){ return null; } // manual summary
+    public String substring(int p0){ return null; } // manual summary
+    public String substring(int p0, int p1){ return null; } // manual summary
+    public String toLowerCase(){ return null; } // manual summary
+    public String toLowerCase(Locale p0){ return null; } // manual summary
+    public String toString(){ return null; } // manual summary
+    public String toUpperCase(){ return null; } // manual summary
+    public String trim(){ return null; } // manual summary
+    public String(String p0){} // manual summary
+    public String(byte[] p0){} // manual summary
+    public String(byte[] p0, Charset p1){} // manual summary
+    public String[] split(String p0){ return null; } // manual summary
+    public boolean contains(CharSequence p0){ return false; } // manual neutral
+    public boolean endsWith(String p0){ return false; } // manual neutral
+    public boolean equals(Object p0){ return false; } // manual neutral
+    public boolean equalsIgnoreCase(String p0){ return false; } // manual neutral
+    public boolean isEmpty(){ return false; } // manual neutral
+    public boolean startsWith(String p0){ return false; } // manual neutral
+    public byte[] getBytes(){ return null; } // manual summary
+    public byte[] getBytes(Charset p0){ return null; } // manual summary
+    public char charAt(int p0){ return '0'; } // manual summary
+    public char[] toCharArray(){ return null; } // manual summary
+    public int compareTo(String p0){ return 0; } // manual neutral
+    public int hashCode(){ return 0; } // manual neutral
+    public int indexOf(String p0){ return 0; } // manual neutral
+    public int indexOf(int p0){ return 0; } // manual neutral
+    public int lastIndexOf(String p0){ return 0; } // manual neutral
+    public int lastIndexOf(int p0){ return 0; } // manual neutral
+    public int length(){ return 0; } // manual neutral
+    public static String format(String p0, Object... p1){ return null; } // manual summary
+    public static String join(CharSequence p0, CharSequence... p1){ return null; } // manual summary
+    public static String join(CharSequence p0, Iterable<? extends CharSequence> p1){ return null; } // manual summary
+    public static String valueOf(Object p0){ return null; } // NOT MODELED
+    public static String valueOf(boolean p0){ return null; } // manual neutral
+    public static String valueOf(int p0){ return null; } // manual neutral
+    public static String valueOf(long p0){ return null; } // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/lang/StringBuffer.java

@@ -0,0 +1,18 @@
+// Generated automatically from java.lang.StringBuffer for testing purposes
+
+package java.lang;
+
+import java.io.Serializable;
+
+public class StringBuffer extends AbstractStringBuilder implements Serializable
+{
+    public String toString(){ return null; } // manual summary
+    public StringBuffer append(Object p0){ return null; } // manual summary
+    public StringBuffer append(String p0){ return null; } // manual summary
+    public StringBuffer append(char p0){ return null; } // manual summary
+
+    public StringBuffer append(CharSequence s, int start, int end) { return null; }
+
+    public void setCharAt(int p0, char p1){}
+    public void setLength(int p0){}
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/lang/StringBuilder.java

@@ -0,0 +1,25 @@
+// Generated automatically from java.lang.StringBuilder for testing purposes
+
+package java.lang;
+
+import java.io.Serializable;
+
+public class StringBuilder extends AbstractStringBuilder implements Serializable
+{
+    public String toString(){ return null; } // manual summary
+    public StringBuilder append(CharSequence p0){ return null; } // manual summary
+    public StringBuilder append(Object p0){ return null; } // manual summary
+    public StringBuilder append(String p0){ return null; } // manual summary
+    public StringBuilder append(boolean p0){ return null; } // manual summary
+    public StringBuilder append(char p0){ return null; } // manual summary
+    public StringBuilder append(int p0){ return null; } // manual summary
+    public StringBuilder append(long p0){ return null; } // manual summary
+    public StringBuilder delete(int p0, int p1){ return null; } // manual summary
+    public StringBuilder(String p0){} // manual summary
+    public StringBuilder(int p0){} // manual summary
+
+    public StringBuilder append(CharSequence s, int start, int end) { return null; }
+
+    public void setCharAt(int p0, char p1){}
+    public void setLength(int p0){}
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/lang/System.java

@@ -0,0 +1,24 @@
+// Generated automatically from java.lang.System for testing purposes
+
+package java.lang;
+
+import java.io.Console;
+import java.io.InputStream;
+import java.io.PrintStream;
+import java.nio.channels.Channel;
+import java.util.Map;
+import java.util.Properties;
+
+public class System
+{
+    protected System() {}
+    public static String getProperty(String p0){ return null; } // NOT MODELED
+    public static String getenv(String p0){ return null; } // manual neutral
+    public static String lineSeparator(){ return null; } // manual neutral
+    public static String setProperty(String p0, String p1){ return null; } // NOT MODELED
+    public static int identityHashCode(Object p0){ return 0; } // manual neutral
+    public static long currentTimeMillis(){ return 0; } // manual neutral
+    public static long nanoTime(){ return 0; } // manual neutral
+    public static void arraycopy(Object p0, int p1, Object p2, int p3, int p4){} // manual summary
+    public static void exit(int p0){} // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/lang/Thread.java

@@ -0,0 +1,16 @@
+// Generated automatically from java.lang.Thread for testing purposes
+
+package java.lang;
+
+import java.util.Map;
+
+public class Thread
+{
+    public ClassLoader getContextClassLoader(){ return null; } // manual neutral
+    public Thread(Runnable p0){} // manual summary
+    public final String getName(){ return null; } // manual summary
+    public static Thread currentThread(){ return null; } // manual neutral
+    public static void sleep(long p0){} // manual neutral
+    public void interrupt(){} // manual neutral
+    public void start(){} // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/lang/ThreadLocal.java

@@ -0,0 +1,10 @@
+// Generated automatically from java.lang.ThreadLocal for testing purposes
+
+package java.lang;
+
+import java.util.function.Supplier;
+
+public class ThreadLocal<T>
+{
+    public T get(){ return null; } // manual summary
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/lang/Throwable.java

@@ -0,0 +1,17 @@
+// Generated automatically from java.lang.Throwable for testing purposes
+
+package java.lang;
+
+import java.io.PrintStream;
+import java.io.PrintWriter;
+import java.io.Serializable;
+
+public class Throwable implements Serializable
+{
+    public String getLocalizedMessage(){ return null; } // manual summary
+    public String getMessage(){ return null; } // manual summary
+    public String toString(){ return null; } // manual summary
+    public Throwable getCause(){ return null; } // manual summary
+    public Throwable(Throwable p0){} // manual summary
+    public void printStackTrace(){} // NOT MODELED
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/lang/invoke/MethodHandles.java

@@ -0,0 +1,21 @@
+// Generated automatically from java.lang.invoke.MethodHandles for testing purposes
+
+package java.lang.invoke;
+
+import java.lang.invoke.MethodHandle;
+import java.lang.invoke.MethodHandleInfo;
+import java.lang.invoke.MethodType;
+import java.lang.reflect.Constructor;
+import java.lang.reflect.Field;
+import java.lang.reflect.Member;
+import java.lang.reflect.Method;
+import java.util.List;
+
+public class MethodHandles
+{
+    protected MethodHandles() {}
+    public static Lookup lookup(){ return null; } // manual neutral
+
+    public static final
+    class Lookup {}
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/lang/reflect/Constructor.java

@@ -0,0 +1,16 @@
+// Generated automatically from java.lang.reflect.Constructor for testing purposes
+
+package java.lang.reflect;
+
+import java.lang.annotation.Annotation;
+import java.lang.reflect.AnnotatedType;
+import java.lang.reflect.Executable;
+import java.lang.reflect.GenericDeclaration;
+import java.lang.reflect.Type;
+import java.lang.reflect.TypeVariable;
+
+public class Constructor<T>
+{
+    protected Constructor() {}
+    public T newInstance(Object... p0){ return null; } // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/lang/reflect/Field.java

@@ -0,0 +1,15 @@
+// Generated automatically from java.lang.reflect.Field for testing purposes
+
+package java.lang.reflect;
+
+import java.lang.annotation.Annotation;
+import java.lang.reflect.AccessibleObject;
+import java.lang.reflect.AnnotatedType;
+import java.lang.reflect.Member;
+import java.lang.reflect.Type;
+
+public class Field extends AccessibleObject
+{
+    protected Field() {}
+    public Object get(Object p0){ return null; } // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/lang/reflect/Method.java

@@ -0,0 +1,17 @@
+// Generated automatically from java.lang.reflect.Method for testing purposes
+
+package java.lang.reflect;
+
+import java.lang.annotation.Annotation;
+import java.lang.reflect.AnnotatedType;
+import java.lang.reflect.Executable;
+import java.lang.reflect.GenericDeclaration;
+import java.lang.reflect.Type;
+import java.lang.reflect.TypeVariable;
+
+public class Method
+{
+    protected Method() {}
+    public Object invoke(Object p0, Object... p1){ return null; } // manual neutral
+    public String getName(){ return null; } // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/math/BigDecimal.java

@@ -0,0 +1,25 @@
+// Generated automatically from java.math.BigDecimal for testing purposes
+
+package java.math;
+
+import java.math.BigInteger;
+import java.math.MathContext;
+import java.math.RoundingMode;
+
+public class BigDecimal
+{
+    protected BigDecimal() {}
+    public BigDecimal add(BigDecimal p0){ return null; } // manual neutral
+    public BigDecimal multiply(BigDecimal p0){ return null; } // manual neutral
+    public BigDecimal setScale(int p0, RoundingMode p1){ return null; } // manual neutral
+    public BigDecimal subtract(BigDecimal p0){ return null; } // manual neutral
+    public BigDecimal(String p0){} // manual neutral
+    public BigDecimal(int p0){} // manual neutral
+    public BigInteger toBigInteger(){ return null; } // manual neutral
+    public String toString(){ return null; } // manual neutral
+    public double doubleValue(){ return 0; } // manual neutral
+    public int compareTo(BigDecimal p0){ return 0; } // manual neutral
+    public int intValue(){ return 0; } // manual neutral
+    public static BigDecimal valueOf(double p0){ return null; } // manual neutral
+    public static BigDecimal valueOf(long p0){ return null; } // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/math/BigInteger.java

@@ -0,0 +1,13 @@
+// Generated automatically from java.math.BigInteger for testing purposes
+
+package java.math;
+
+import java.util.Random;
+
+public class BigInteger
+{
+    protected BigInteger() {}
+    public BigInteger or(BigInteger p0){ return null; } // manual neutral
+    public BigInteger(String p0){} // manual neutral
+    public static BigInteger valueOf(long p0){ return null; } // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/net/URI.java

@@ -0,0 +1,14 @@
+// Generated automatically from java.net.URI for testing purposes
+
+package java.net;
+
+import java.io.Serializable;
+import java.net.URL;
+
+public class URI implements Serializable
+{
+    protected URI() {}
+    public String toString(){ return null; } // manual summary
+    public URI(String p0){} // manual summary
+    public static URI create(String p0){ return null; } // manual summary
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/net/URL.java

@@ -0,0 +1,18 @@
+// Generated automatically from java.net.URL for testing purposes
+
+package java.net;
+
+import java.io.InputStream;
+import java.io.Serializable;
+import java.net.Proxy;
+import java.net.URI;
+import java.net.URLConnection;
+import java.net.URLStreamHandler;
+import java.net.URLStreamHandlerFactory;
+
+public class URL implements Serializable
+{
+    protected URL() {}
+    public URI toURI(){ return null; } // manual summary
+    public URL(String p0){} // manual summary
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/nio/Buffer.java

@@ -0,0 +1,11 @@
+// Generated automatically from java.nio.Buffer for testing purposes
+
+package java.nio;
+
+
+abstract public class Buffer
+{
+    protected Buffer() {}
+    public final int position(){ return 0; } // manual neutral
+    public final int remaining(){ return 0; } // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/nio/ByteBuffer.java

@@ -0,0 +1,20 @@
+// Generated automatically from java.nio.ByteBuffer for testing purposes
+
+package java.nio;
+
+import java.nio.Buffer;
+import java.nio.ByteOrder;
+import java.nio.CharBuffer;
+import java.nio.DoubleBuffer;
+import java.nio.FloatBuffer;
+import java.nio.IntBuffer;
+import java.nio.LongBuffer;
+import java.nio.ShortBuffer;
+
+abstract public class ByteBuffer extends Buffer implements Comparable<ByteBuffer>
+{
+    protected ByteBuffer() {}
+    public final byte[] array(){ return null; } // manual summary
+    public static ByteBuffer allocate(int p0){ return null; } // manual neutral
+    public static ByteBuffer wrap(byte[] p0){ return null; } // manual summary
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/nio/charset/Charset.java

@@ -0,0 +1,17 @@
+// Generated automatically from java.nio.charset.Charset for testing purposes
+
+package java.nio.charset;
+
+import java.nio.ByteBuffer;
+import java.nio.CharBuffer;
+import java.nio.charset.CharsetDecoder;
+import java.nio.charset.CharsetEncoder;
+import java.util.Locale;
+import java.util.Set;
+import java.util.SortedMap;
+
+abstract public class Charset implements Comparable<Charset>
+{
+    protected Charset() {}
+    public final String name(){ return null; } // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/nio/file/Files.java

@@ -0,0 +1,35 @@
+// Generated automatically from java.nio.file.Files for testing purposes
+
+package java.nio.file;
+
+import java.io.BufferedReader;
+import java.io.BufferedWriter;
+import java.io.InputStream;
+import java.io.OutputStream;
+import java.nio.channels.SeekableByteChannel;
+import java.nio.charset.Charset;
+import java.nio.file.CopyOption;
+import java.nio.file.DirectoryStream;
+import java.nio.file.FileStore;
+import java.nio.file.FileVisitOption;
+import java.nio.file.FileVisitor;
+import java.nio.file.LinkOption;
+import java.nio.file.OpenOption;
+import java.nio.file.Path;
+import java.nio.file.attribute.BasicFileAttributes;
+import java.nio.file.attribute.FileAttribute;
+import java.nio.file.attribute.FileAttributeView;
+import java.nio.file.attribute.FileTime;
+import java.nio.file.attribute.PosixFilePermission;
+import java.nio.file.attribute.UserPrincipal;
+import java.util.List;
+import java.util.Map;
+import java.util.Set;
+import java.util.function.BiPredicate;
+import java.util.stream.Stream;
+
+public class Files
+{
+    protected Files() {}
+    public static boolean exists(Path p0, LinkOption... p1){ return false; } // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/nio/file/Path.java

@@ -0,0 +1,23 @@
+// Generated automatically from java.nio.file.Path for testing purposes
+
+package java.nio.file;
+
+import java.io.File;
+import java.net.URI;
+import java.nio.file.FileSystem;
+import java.nio.file.LinkOption;
+import java.nio.file.WatchEvent;
+import java.nio.file.WatchKey;
+import java.nio.file.WatchService;
+import java.nio.file.Watchable;
+import java.util.Iterator;
+
+public interface Path extends Comparable<Path>, Iterable<Path>, Watchable
+{
+    File toFile(); // manual summary
+    Path getFileName(); // manual summary
+    Path getParent(); // manual summary
+    Path resolve(String p0); // manual summary
+    Path toAbsolutePath(); // manual summary
+    String toString(); // manual summary
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/nio/file/Paths.java

@@ -0,0 +1,12 @@
+// Generated automatically from java.nio.file.Paths for testing purposes
+
+package java.nio.file;
+
+import java.net.URI;
+import java.nio.file.Path;
+
+public class Paths
+{
+    protected Paths() {}
+    public static Path get(String p0, String... p1){ return null; } // manual summary
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/sql/Connection.java

@@ -0,0 +1,25 @@
+// Generated automatically from java.sql.Connection for testing purposes
+
+package java.sql;
+
+import java.sql.Array;
+import java.sql.Blob;
+import java.sql.CallableStatement;
+import java.sql.Clob;
+import java.sql.DatabaseMetaData;
+import java.sql.NClob;
+import java.sql.PreparedStatement;
+import java.sql.SQLWarning;
+import java.sql.SQLXML;
+import java.sql.Savepoint;
+import java.sql.Statement;
+import java.sql.Struct;
+import java.sql.Wrapper;
+import java.util.Map;
+import java.util.Properties;
+import java.util.concurrent.Executor;
+
+public interface Connection extends AutoCloseable, Wrapper
+{
+    Statement createStatement(); // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/sql/PreparedStatement.java

@@ -0,0 +1,32 @@
+// Generated automatically from java.sql.PreparedStatement for testing purposes
+
+package java.sql;
+
+import java.io.InputStream;
+import java.io.Reader;
+import java.math.BigDecimal;
+import java.net.URL;
+import java.sql.Array;
+import java.sql.Blob;
+import java.sql.Clob;
+import java.sql.NClob;
+import java.sql.ParameterMetaData;
+import java.sql.Ref;
+import java.sql.ResultSet;
+import java.sql.ResultSetMetaData;
+import java.sql.RowId;
+import java.sql.SQLType;
+import java.sql.SQLXML;
+import java.sql.Statement;
+import java.sql.Time;
+import java.sql.Timestamp;
+import java.util.Calendar;
+
+public interface PreparedStatement extends Statement
+{
+    ResultSet executeQuery(); // manual neutral
+    int executeUpdate(); // manual neutral
+    void setInt(int p0, int p1); // manual neutral
+    void setLong(int p0, long p1); // manual neutral
+    void setString(int p0, String p1); // manual summary
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/sql/ResultSet.java

@@ -0,0 +1,35 @@
+// Generated automatically from java.sql.ResultSet for testing purposes
+
+package java.sql;
+
+import java.io.InputStream;
+import java.io.Reader;
+import java.math.BigDecimal;
+import java.net.URL;
+import java.sql.Array;
+import java.sql.Blob;
+import java.sql.Clob;
+import java.sql.NClob;
+import java.sql.Ref;
+import java.sql.ResultSetMetaData;
+import java.sql.RowId;
+import java.sql.SQLType;
+import java.sql.SQLWarning;
+import java.sql.SQLXML;
+import java.sql.Statement;
+import java.sql.Time;
+import java.sql.Timestamp;
+import java.sql.Wrapper;
+import java.util.Calendar;
+import java.util.Map;
+
+public interface ResultSet extends AutoCloseable, Wrapper
+{
+    String getString(String p0); // manual summary
+    String getString(int p0); // manual neutral
+    Timestamp getTimestamp(String p0); // manual neutral
+    boolean next(); // manual neutral
+    int getInt(String p0); // manual neutral
+    int getInt(int p0); // manual neutral
+    long getLong(String p0); // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/sql/Statement.java

@@ -0,0 +1,13 @@
+// Generated automatically from java.sql.Statement for testing purposes
+
+package java.sql;
+
+import java.sql.Connection;
+import java.sql.ResultSet;
+import java.sql.SQLWarning;
+import java.sql.Wrapper;
+
+public interface Statement extends AutoCloseable, Wrapper
+{
+    void close(); // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/sql/Timestamp.java

@@ -0,0 +1,13 @@
+// Generated automatically from java.sql.Timestamp for testing purposes
+
+package java.sql;
+
+import java.time.Instant;
+import java.time.LocalDateTime;
+
+public class Timestamp
+{
+    protected Timestamp() {}
+    public Timestamp(long p0){} // manual neutral
+    public long getTime(){ return 0; } // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/text/DateFormat.java

@@ -0,0 +1,17 @@
+// Generated automatically from java.text.DateFormat for testing purposes
+
+package java.text;
+
+import java.text.FieldPosition;
+import java.text.Format;
+import java.text.NumberFormat;
+import java.text.ParsePosition;
+import java.util.Calendar;
+import java.util.Locale;
+import java.util.TimeZone;
+
+abstract public class DateFormat extends Format
+{
+    public final String format(java.util.Date p0){ return null; } // manual neutral
+    public java.util.Date parse(String p0){ return null; } // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/text/Format.java

@@ -0,0 +1,13 @@
+// Generated automatically from java.text.Format for testing purposes
+
+package java.text;
+
+import java.io.Serializable;
+import java.text.AttributedCharacterIterator;
+import java.text.FieldPosition;
+import java.text.ParsePosition;
+
+abstract public class Format implements Cloneable, Serializable
+{
+    public final String format(Object p0){ return null; } // NOT MODELED
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/text/MessageFormat.java

@@ -0,0 +1,15 @@
+// Generated automatically from java.text.MessageFormat for testing purposes
+
+package java.text;
+
+import java.text.AttributedCharacterIterator;
+import java.text.FieldPosition;
+import java.text.Format;
+import java.text.ParsePosition;
+import java.util.Locale;
+
+public class MessageFormat extends Format
+{
+    protected MessageFormat() {}
+    public static String format(String p0, Object... p1){ return null; } // NOT MODELED
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/text/SimpleDateFormat.java

@@ -0,0 +1,15 @@
+// Generated automatically from java.text.SimpleDateFormat for testing purposes
+
+package java.text;
+
+import java.text.AttributedCharacterIterator;
+import java.text.DateFormat;
+import java.text.DateFormatSymbols;
+import java.text.FieldPosition;
+import java.text.ParsePosition;
+import java.util.Locale;
+
+public class SimpleDateFormat extends DateFormat
+{
+    public SimpleDateFormat(String p0){} // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/time/Duration.java

@@ -0,0 +1,18 @@
+// Generated automatically from java.time.Duration for testing purposes
+
+package java.time;
+
+import java.io.Serializable;
+import java.time.temporal.Temporal;
+import java.time.temporal.TemporalAmount;
+import java.time.temporal.TemporalUnit;
+import java.util.List;
+
+public class Duration implements Serializable
+{
+    protected Duration() {}
+    public long toMillis(){ return 0; } // manual neutral
+    public static Duration ofMillis(long p0){ return null; } // manual neutral
+    public static Duration ofMinutes(long p0){ return null; } // manual neutral
+    public static Duration ofSeconds(long p0){ return null; } // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/time/Instant.java

@@ -0,0 +1,27 @@
+// Generated automatically from java.time.Instant for testing purposes
+
+package java.time;
+
+import java.io.Serializable;
+import java.time.Clock;
+import java.time.OffsetDateTime;
+import java.time.ZoneId;
+import java.time.ZoneOffset;
+import java.time.ZonedDateTime;
+import java.time.temporal.Temporal;
+import java.time.temporal.TemporalAccessor;
+import java.time.temporal.TemporalAdjuster;
+import java.time.temporal.TemporalAmount;
+import java.time.temporal.TemporalField;
+import java.time.temporal.TemporalQuery;
+import java.time.temporal.TemporalUnit;
+import java.time.temporal.ValueRange;
+
+public class Instant implements Serializable
+{
+    protected Instant() {}
+    public long toEpochMilli(){ return 0; } // manual neutral
+    public static Instant now(){ return null; } // manual neutral
+    public static Instant ofEpochMilli(long p0){ return null; } // manual neutral
+    public static Instant parse(CharSequence p0){ return null; } // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/time/LocalDate.java

@@ -0,0 +1,36 @@
+// Generated automatically from java.time.LocalDate for testing purposes
+
+package java.time;
+
+import java.io.Serializable;
+import java.time.Clock;
+import java.time.DayOfWeek;
+import java.time.LocalDateTime;
+import java.time.LocalTime;
+import java.time.Month;
+import java.time.OffsetDateTime;
+import java.time.OffsetTime;
+import java.time.Period;
+import java.time.ZoneId;
+import java.time.ZonedDateTime;
+import java.time.chrono.ChronoLocalDate;
+import java.time.chrono.Era;
+import java.time.chrono.IsoChronology;
+import java.time.format.DateTimeFormatter;
+import java.time.temporal.Temporal;
+import java.time.temporal.TemporalAccessor;
+import java.time.temporal.TemporalAdjuster;
+import java.time.temporal.TemporalAmount;
+import java.time.temporal.TemporalField;
+import java.time.temporal.TemporalQuery;
+import java.time.temporal.TemporalUnit;
+import java.time.temporal.ValueRange;
+
+public class LocalDate implements Serializable
+{
+    protected LocalDate() {}
+    public LocalDate plusDays(long p0){ return null; } // manual neutral
+    public static LocalDate now(){ return null; } // manual neutral
+    public static LocalDate of(int p0, int p1, int p2){ return null; } // manual neutral
+    public static LocalDate parse(CharSequence p0){ return null; } // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/time/LocalDateTime.java

@@ -0,0 +1,33 @@
+// Generated automatically from java.time.LocalDateTime for testing purposes
+
+package java.time;
+
+import java.io.Serializable;
+import java.time.Clock;
+import java.time.DayOfWeek;
+import java.time.Instant;
+import java.time.LocalDate;
+import java.time.LocalTime;
+import java.time.Month;
+import java.time.OffsetDateTime;
+import java.time.ZoneId;
+import java.time.ZoneOffset;
+import java.time.ZonedDateTime;
+import java.time.chrono.ChronoLocalDate;
+import java.time.chrono.ChronoLocalDateTime;
+import java.time.format.DateTimeFormatter;
+import java.time.temporal.Temporal;
+import java.time.temporal.TemporalAccessor;
+import java.time.temporal.TemporalAdjuster;
+import java.time.temporal.TemporalAmount;
+import java.time.temporal.TemporalField;
+import java.time.temporal.TemporalQuery;
+import java.time.temporal.TemporalUnit;
+import java.time.temporal.ValueRange;
+
+public class LocalDateTime implements Serializable
+{
+    protected LocalDateTime() {}
+    public static LocalDateTime now(){ return null; } // manual neutral
+    public static LocalDateTime of(int p0, int p1, int p2, int p3, int p4, int p5){ return null; } // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/time/ZoneId.java

@@ -0,0 +1,18 @@
+// Generated automatically from java.time.ZoneId for testing purposes
+
+package java.time;
+
+import java.io.Serializable;
+import java.time.ZoneOffset;
+import java.time.format.TextStyle;
+import java.time.temporal.TemporalAccessor;
+import java.time.zone.ZoneRules;
+import java.util.Locale;
+import java.util.Map;
+import java.util.Set;
+
+abstract public class ZoneId implements Serializable
+{
+    public static ZoneId of(String p0){ return null; } // manual neutral
+    public static ZoneId systemDefault(){ return null; } // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/time/ZonedDateTime.java

@@ -0,0 +1,32 @@
+// Generated automatically from java.time.ZonedDateTime for testing purposes
+
+package java.time;
+
+import java.io.Serializable;
+import java.time.Clock;
+import java.time.DayOfWeek;
+import java.time.Instant;
+import java.time.LocalDate;
+import java.time.LocalDateTime;
+import java.time.LocalTime;
+import java.time.Month;
+import java.time.OffsetDateTime;
+import java.time.ZoneId;
+import java.time.ZoneOffset;
+import java.time.chrono.ChronoLocalDate;
+import java.time.chrono.ChronoZonedDateTime;
+import java.time.format.DateTimeFormatter;
+import java.time.temporal.Temporal;
+import java.time.temporal.TemporalAccessor;
+import java.time.temporal.TemporalAdjuster;
+import java.time.temporal.TemporalAmount;
+import java.time.temporal.TemporalField;
+import java.time.temporal.TemporalQuery;
+import java.time.temporal.TemporalUnit;
+import java.time.temporal.ValueRange;
+
+public class ZonedDateTime implements Serializable
+{
+    protected ZonedDateTime() {}
+    public static ZonedDateTime now(){ return null; } // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/time/chrono/ChronoZonedDateTime.java

@@ -0,0 +1,26 @@
+// Generated automatically from java.time.chrono.ChronoZonedDateTime for testing purposes
+
+package java.time.chrono;
+
+import java.time.Instant;
+import java.time.LocalTime;
+import java.time.ZoneId;
+import java.time.ZoneOffset;
+import java.time.chrono.ChronoLocalDate;
+import java.time.chrono.ChronoLocalDateTime;
+import java.time.chrono.Chronology;
+import java.time.format.DateTimeFormatter;
+import java.time.temporal.Temporal;
+import java.time.temporal.TemporalAccessor;
+import java.time.temporal.TemporalAdjuster;
+import java.time.temporal.TemporalAmount;
+import java.time.temporal.TemporalField;
+import java.time.temporal.TemporalQuery;
+import java.time.temporal.TemporalUnit;
+import java.time.temporal.ValueRange;
+import java.util.Comparator;
+
+public interface ChronoZonedDateTime<D extends ChronoLocalDate> extends Comparable<ChronoZonedDateTime<? extends Object>>, Temporal
+{
+    default Instant toInstant(){ return null; } // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/time/format/DateTimeFormatter.java

@@ -0,0 +1,24 @@
+// Generated automatically from java.time.format.DateTimeFormatter for testing purposes
+
+package java.time.format;
+
+import java.text.Format;
+import java.text.ParsePosition;
+import java.time.Period;
+import java.time.ZoneId;
+import java.time.chrono.Chronology;
+import java.time.format.DecimalStyle;
+import java.time.format.FormatStyle;
+import java.time.format.ResolverStyle;
+import java.time.temporal.TemporalAccessor;
+import java.time.temporal.TemporalField;
+import java.time.temporal.TemporalQuery;
+import java.util.Locale;
+import java.util.Set;
+
+public class DateTimeFormatter
+{
+    protected DateTimeFormatter() {}
+    public String format(TemporalAccessor p0){ return null; } // manual neutral
+    public static DateTimeFormatter ofPattern(String p0){ return null; } // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/util/ArrayList.java

@@ -0,0 +1,27 @@
+// Generated automatically from java.util.ArrayList for testing purposes
+
+package java.util;
+
+import java.io.Serializable;
+import java.util.AbstractList;
+import java.util.Collection;
+import java.util.Comparator;
+import java.util.Iterator;
+import java.util.List;
+import java.util.ListIterator;
+import java.util.RandomAccess;
+import java.util.Spliterator;
+import java.util.function.Consumer;
+import java.util.function.Predicate;
+import java.util.function.UnaryOperator;
+
+public class ArrayList<E> extends java.util.AbstractList<E> implements Cloneable, RandomAccess, Serializable, java.util.List<E>
+{
+    public ArrayList(int p0){} // manual neutral
+    public ArrayList(java.util.Collection<? extends E> p0){} // manual summary
+    public E get(int p0){ return null; } // manual summary
+    public boolean add(E p0){ return false; } // manual summary
+    public boolean addAll(java.util.Collection<? extends E> p0){ return false; } // manual summary
+    public boolean isEmpty(){ return false; } // manual neutral
+    public int size(){ return 0; } // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/util/Arrays.java

@@ -0,0 +1,27 @@
+// Generated automatically from java.util.Arrays for testing purposes
+
+package java.util;
+
+import java.util.Comparator;
+import java.util.List;
+import java.util.Spliterator;
+import java.util.function.BinaryOperator;
+import java.util.function.DoubleBinaryOperator;
+import java.util.function.IntBinaryOperator;
+import java.util.function.IntFunction;
+import java.util.function.IntToDoubleFunction;
+import java.util.function.IntToLongFunction;
+import java.util.function.IntUnaryOperator;
+import java.util.function.LongBinaryOperator;
+import java.util.stream.DoubleStream;
+import java.util.stream.IntStream;
+import java.util.stream.LongStream;
+import java.util.stream.Stream;
+
+public class Arrays
+{
+    protected Arrays() {}
+    public static <T> java.util.List<T> asList(T... p0){ return null; } // manual summary
+    public static <T> java.util.stream.Stream<T> stream(T[] p0){ return null; } // manual summary
+    public static String toString(Object[] p0){ return null; } // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/util/Calendar.java

@@ -0,0 +1,21 @@
+// Generated automatically from java.util.Calendar for testing purposes
+
+package java.util;
+
+import java.io.Serializable;
+import java.time.Instant;
+import java.util.Locale;
+import java.util.Map;
+import java.util.Set;
+import java.util.TimeZone;
+
+abstract public class Calendar implements Cloneable, Comparable<Calendar>, Serializable
+{
+    public abstract void add(int p0, int p1); // manual neutral
+    public final java.util.Date getTime(){ return null; } // manual neutral
+    public final void setTime(java.util.Date p0){} // manual neutral
+    public int get(int p0){ return 0; } // manual neutral
+    public long getTimeInMillis(){ return 0; } // manual neutral
+    public static Calendar getInstance(){ return null; } // manual neutral
+    public void set(int p0, int p1){} // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/util/Collection.java

@@ -0,0 +1,23 @@
+// Generated automatically from java.util.Collection for testing purposes
+
+package java.util;
+
+import java.util.Iterator;
+import java.util.Spliterator;
+import java.util.function.Predicate;
+import java.util.stream.Stream;
+
+public interface Collection<E> extends java.lang.Iterable<E>
+{
+    boolean add(E p0); // manual summary
+    boolean contains(Object p0); // manual neutral
+    boolean isEmpty(); // manual neutral
+    default boolean removeIf(java.util.function.Predicate<? super E> p0){ return false; } // manual neutral
+    default java.util.stream.Stream<E> stream(){ return null; } // manual summary
+    int size(); // manual neutral
+    java.util.Iterator<E> iterator(); // manual summary
+
+    boolean	addAll(Collection<? extends E> c);
+    Object[] toArray();
+    <T> T[] toArray(T[] a);
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/util/Collections.java

@@ -0,0 +1,36 @@
+// Generated automatically from java.util.Collections for testing purposes
+
+package java.util;
+
+import java.util.ArrayList;
+import java.util.Collection;
+import java.util.Comparator;
+import java.util.Deque;
+import java.util.Enumeration;
+import java.util.Iterator;
+import java.util.List;
+import java.util.ListIterator;
+import java.util.Map;
+import java.util.NavigableMap;
+import java.util.NavigableSet;
+import java.util.Queue;
+import java.util.Random;
+import java.util.Set;
+import java.util.SortedMap;
+import java.util.SortedSet;
+
+public class Collections
+{
+    protected Collections() {}
+    public static <K, V> java.util.Map<K, V> emptyMap(){ return null; } // manual neutral
+    public static <K, V> java.util.Map<K, V> singletonMap(K p0, V p1){ return null; } // manual summary
+    public static <K, V> java.util.Map<K, V> unmodifiableMap(java.util.Map<? extends K, ? extends V> p0){ return null; } // manual summary
+    public static <T extends java.lang.Comparable<? super T>> void sort(java.util.List<T> p0){} // manual neutral
+    public static <T> java.util.List<T> emptyList(){ return null; } // manual neutral
+    public static <T> java.util.List<T> singletonList(T p0){ return null; } // manual summary
+    public static <T> java.util.List<T> unmodifiableList(java.util.List<? extends T> p0){ return null; } // manual summary
+    public static <T> java.util.Set<T> emptySet(){ return null; } // manual neutral
+    public static <T> java.util.Set<T> singleton(T p0){ return null; } // manual summary
+    public static <T> java.util.Set<T> unmodifiableSet(Set<? extends T> p0){ return null; } // manual summary
+    public static <T> void sort(java.util.List<T> p0, java.util.Comparator<? super T> p1){} // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/util/Comparator.java

@@ -0,0 +1,13 @@
+// Generated automatically from java.util.Comparator for testing purposes
+
+package java.util;
+
+import java.util.function.Function;
+import java.util.function.ToDoubleFunction;
+import java.util.function.ToIntFunction;
+import java.util.function.ToLongFunction;
+
+public interface Comparator<T>
+{
+    static <T, U extends java.lang.Comparable<? super U>> java.util.Comparator<T> comparing(java.util.function.Function<? super T, ? extends U> p0){ return null; } // NOT MODELED
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/util/Date.java

@@ -0,0 +1,14 @@
+// Generated automatically from java.util.Date for testing purposes
+
+package java.util;
+
+import java.io.Serializable;
+import java.time.Instant;
+
+public class Date implements Cloneable, Serializable
+{
+    public Date(long p0){} // manual neutral
+    public Instant toInstant(){ return null; } // manual neutral
+    public long getTime(){ return 0; } // manual neutral
+    public static java.util.Date from(Instant p0){ return null; } // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/util/Enumeration.java

@@ -0,0 +1,10 @@
+// Generated automatically from java.util.Enumeration for testing purposes
+
+package java.util;
+
+
+public interface Enumeration<E>
+{
+    E nextElement(); // manual summary
+    boolean hasMoreElements(); // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/util/EventObject.java

@@ -0,0 +1,11 @@
+// Generated automatically from java.util.EventObject for testing purposes
+
+package java.util;
+
+import java.io.Serializable;
+
+public class EventObject implements Serializable
+{
+    protected EventObject() {}
+    public Object getSource(){ return null; } // manual summary
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/util/HashMap.java

@@ -0,0 +1,25 @@
+// Generated automatically from java.util.HashMap for testing purposes
+
+package java.util;
+
+import java.io.Serializable;
+import java.util.AbstractMap;
+import java.util.Collection;
+import java.util.LinkedHashMap;
+import java.util.Map;
+import java.util.Set;
+import java.util.function.BiConsumer;
+import java.util.function.BiFunction;
+import java.util.function.Function;
+
+public class HashMap<K, V> extends java.util.AbstractMap<K, V> implements Cloneable, Serializable
+{
+    public HashMap(){}
+    public HashMap(int p0){} // manual neutral
+    public HashMap(java.util.Map<? extends K, ? extends V> p0){} // manual summary
+    public V get(Object p0){ return null; } // manual summary
+    public V put(K p0, V p1){ return null; } // manual summary
+    public boolean containsKey(Object p0){ return false; } // manual neutral
+    public int size(){ return 0; } // manual neutral
+    public Set<Map.Entry<K, V>> entrySet(){ return null; } // manual summary
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/util/HashSet.java

@@ -0,0 +1,33 @@
+// Generated automatically from java.util.HashSet for testing purposes
+
+package java.util;
+
+import java.io.Serializable;
+import java.util.AbstractSet;
+import java.util.Collection;
+import java.util.Iterator;
+import java.util.Set;
+import java.util.Spliterator;
+
+public class HashSet<E> implements Cloneable, Serializable, java.util.Set<E>
+{
+    public HashSet(int p0){} // manual neutral
+    public HashSet(java.util.Collection<? extends E> p0){} // manual summary
+    public boolean add(E p0){ return false; } // manual summary
+
+    public void clear() {}
+    public Iterator<E> iterator() { return null; }
+    public int size() { return 0; }
+    public boolean isEmpty() { return false; }
+    public boolean remove(Object o) { return false; }
+    public boolean removeAll(Collection<?> c) { return false; }
+    public boolean contains(Object o) { return false; }
+    public Object[] toArray() { return null; }
+    public <T> T[] toArray(T[] a) { return null; }
+    public boolean containsAll(Collection<?> c) { return false; }
+    public boolean addAll(Collection<? extends E> c) { return false; }
+    public boolean retainAll(Collection<?> c) { return false; }
+    public boolean equals(Object o) { return false; }
+    public int hashCode() { return 0; }
+
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/util/Hashtable.java

@@ -0,0 +1,25 @@
+// Generated automatically from java.util.Hashtable for testing purposes
+
+package java.util;
+
+import java.io.Serializable;
+import java.util.Collection;
+import java.util.Dictionary;
+import java.util.Enumeration;
+import java.util.Map;
+import java.util.Set;
+import java.util.function.BiConsumer;
+import java.util.function.BiFunction;
+import java.util.function.Function;
+
+public class Hashtable<K, V> extends Dictionary<K, V> implements Cloneable, Serializable
+{
+    public V get(Object p0){ return null; } // manual summary
+    public V put(K p0, V p1){ return null; } // manual summary
+
+    public synchronized V remove(Object key) { return null; }
+    public synchronized Enumeration<V> elements() { return null; }
+    public synchronized boolean isEmpty() { return false; }
+    public synchronized int size() { return 0; }
+    public synchronized Enumeration<K> keys() { return null; }
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/util/Iterator.java

@@ -0,0 +1,12 @@
+// Generated automatically from java.util.Iterator for testing purposes
+
+package java.util;
+
+import java.util.function.Consumer;
+
+public interface Iterator<E>
+{
+    E next(); // manual summary
+    boolean hasNext(); // manual neutral
+    default void remove(){} // manual neutral
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/util/LinkedHashMap.java

@@ -0,0 +1,15 @@
+// Generated automatically from java.util.LinkedHashMap for testing purposes
+
+package java.util;
+
+import java.util.Collection;
+import java.util.HashMap;
+import java.util.Map;
+import java.util.Set;
+import java.util.function.BiConsumer;
+import java.util.function.BiFunction;
+
+public class LinkedHashMap<K, V> extends java.util.HashMap<K, V>
+{
+    public V get(Object p0){ return null; } // manual summary
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/util/LinkedHashSet.java

@@ -0,0 +1,14 @@
+// Generated automatically from java.util.LinkedHashSet for testing purposes
+
+package java.util;
+
+import java.io.Serializable;
+import java.util.Collection;
+import java.util.HashSet;
+import java.util.Set;
+import java.util.Spliterator;
+
+public class LinkedHashSet<E> implements Cloneable, Serializable
+{
+    public LinkedHashSet(java.util.Collection<? extends E> p0){} // manual summary
+}

java/ql/test/query-tests/Metrics/GeneratedVsManualCoverage/TopJdkApisTest/TopJdkApis/java/util/LinkedList.java

@@ -0,0 +1,33 @@
+// Generated automatically from java.util.LinkedList for testing purposes
+
+package java.util;
+
+import java.io.Serializable;
+import java.util.AbstractSequentialList;
+import java.util.Collection;
+import java.util.Deque;
+import java.util.Iterator;
+import java.util.List;
+import java.util.ListIterator;
+import java.util.Spliterator;
+
+public class LinkedList<E> extends AbstractSequentialList<E> implements Cloneable, Serializable
+{
+    public boolean add(E p0){ return false; } // manual summary
+
+    public ListIterator<E> listIterator(int index) { return null; }
+    public void clear() {}
+    public Iterator<E> iterator() { return null; }
+    public int size() { return 0; }
+    public boolean isEmpty() { return false; }
+    public boolean remove(Object o) { return false; }
+    public boolean removeAll(Collection<?> c) { return false; }
+    public boolean contains(Object o) { return false; }
+    public Object[] toArray() { return null; }
+    public <T> T[] toArray(T[] a) { return null; }
+    public boolean containsAll(Collection<?> c) { return false; }
+    public boolean addAll(Collection<? extends E> c) { return false; }
+    public boolean retainAll(Collection<?> c) { return false; }
+    public boolean equals(Object o) { return false; }
+    public int hashCode() { return 0; }
+}