Python: Remove use of deprecated methods

python/ql/src/Statements/ModificationOfLocals.ql

@@ -25,7 +25,7 @@ Object aFunctionLocalsObject() {
 
 
 predicate modification_of_locals(ControlFlowNode f) {
-    f.(SubscriptNode).getValue().refersTo(aFunctionLocalsObject()) and (f.isStore() or f.isDelete())
+    f.(SubscriptNode).getObject().refersTo(aFunctionLocalsObject()) and (f.isStore() or f.isDelete())
     or
     exists(string mname, AttrNode attr |
         attr = f.(CallNode).getFunction() and

python/ql/src/Statements/RedundantAssignment.ql

@@ -65,7 +65,7 @@ predicate same_attribute(Attribute a1, Attribute a2) {
 
 int pyflakes_commented_line(File file) {
     exists(Comment c | c.getText().toLowerCase().matches("%pyflakes%") |
-        c.getLocation().hasLocationInfo(file.getName(), result, _, _, _)
+        c.getLocation().hasLocationInfo(file.getAbsolutePath(), result, _, _, _)
     )
 }
 

python/ql/src/Variables/UndefinedExport.ql

@@ -30,7 +30,7 @@ predicate mutates_globals(ModuleValue m) {
     |
         exists(AttrNode attr | attr.getObject() = globals)
         or
-        exists(SubscriptNode sub | sub.getValue() = globals and sub.isStore())
+        exists(SubscriptNode sub | sub.getObject() = globals and sub.isStore())
     )
     or
     exists(Value enum_convert, ClassValue enum_class |

python/ql/src/analysis/Sanity.ql

@@ -206,8 +206,8 @@ predicate file_sanity(string clsname, string problem, string what) {
     exists(File file, Folder folder |
         clsname = file.getAQlClass() and
         problem = "has same name as a folder" and
-        what = file.getName() and
-        what = folder.getName()
+        what = file.getAbsolutePath() and
+        what = folder.getAbsolutePath()
     ) or
     exists(Container f |
         clsname = f.getAQlClass() and

python/ql/src/external/DuplicateBlock.ql

@@ -21,14 +21,14 @@ predicate sorted_by_location(DuplicateBlock x, DuplicateBlock y) {
     if x.sourceFile() = y.sourceFile() then
         x.sourceStartLine() < y.sourceStartLine()
     else
-        x.sourceFile().getName() < y.sourceFile().getName()
+        x.sourceFile().getAbsolutePath() < y.sourceFile().getAbsolutePath()
 }
 
 from DuplicateBlock d, DuplicateBlock other
 where d.sourceLines() > 10 and
       other.getEquivalenceClass() = d.getEquivalenceClass() and
       sorted_by_location(other, d)
-select 
-   d, 
+select
+   d,
    "Duplicate code: " + d.sourceLines() + " lines are duplicated at " +
    other.sourceFile().getShortName() + ":" + other.sourceStartLine().toString()

python/ql/src/semmle/python/Files.qll

@@ -10,16 +10,16 @@ class File extends Container {
 
     /** DEPRECATED: Use `getAbsolutePath` instead. */
     deprecated override string getName() {
-        files(this, result, _, _, _)
+        result = this.getAbsolutePath()
     }
 
     /** DEPRECATED: Use `getAbsolutePath` instead. */
     deprecated string getFullName() {
-        result = getName()
+        result = this.getAbsolutePath()
     }
 
     predicate hasLocationInfo(string filepath, int bl, int bc, int el, int ec) {
-        this.getName() = filepath and bl = 0 and bc = 0 and el = 0 and ec = 0
+        this.getAbsolutePath() = filepath and bl = 0 and bc = 0 and el = 0 and ec = 0
     }
 
     /** Whether this file is a source code file. */
@@ -98,7 +98,7 @@ class Folder extends Container {
 
     /** DEPRECATED: Use `getAbsolutePath` instead. */
     deprecated override string getName() {
-        folders(this, result, _)
+        result = this.getAbsolutePath()
     }
 
     /** DEPRECATED: Use `getBaseName` instead. */
@@ -107,7 +107,7 @@ class Folder extends Container {
     }
 
     predicate hasLocationInfo(string filepath, int bl, int bc, int el, int ec) {
-        this.getName() = filepath and bl = 0 and bc = 0 and el = 0 and ec = 0
+        this.getAbsolutePath() = filepath and bl = 0 and bc = 0 and el = 0 and ec = 0
     }
 
     override string getAbsolutePath() {
@@ -427,11 +427,11 @@ class Location extends @location {
     }
 
     string toString() {
-        result = this.getPath().getName() + ":" + this.getStartLine().toString()
+        result = this.getPath().getAbsolutePath() + ":" + this.getStartLine().toString()
     }
 
     predicate hasLocationInfo(string filepath, int bl, int bc, int el, int ec) {
-        exists(File f | f.getName() = filepath |
+        exists(File f | f.getAbsolutePath() = filepath |
             locations_default(this, f, bl, bc, el, ec)
             or
             exists(Module m | m.getFile() = f |
@@ -445,7 +445,7 @@ class Location extends @location {
 class Line extends @py_line {
 
     predicate hasLocationInfo(string filepath, int bl, int bc, int el, int ec) {
-        exists(Module m | m.getFile().getName() = filepath and
+        exists(Module m | m.getFile().getAbsolutePath() = filepath and
             el = bl and bc = 1 and
             py_line_lengths(this, m, bl, ec))
     }

python/ql/src/semmle/python/pointsto/PointsTo.qll

@@ -612,7 +612,7 @@ cached module PointsToInternal {
         exists(ControlFlowNode sys_modules_flow, ControlFlowNode n, ControlFlowNode mod |
           /* Use previous points-to here to avoid slowing down the recursion too much */
           exists(SubscriptNode sub |
-              sub.getValue() = sys_modules_flow and
+              sub.getObject() = sys_modules_flow and
               pointsTo(sys_modules_flow, _, ObjectInternal::sysModules(), _) and
               sub.getIndex() = n and
               n.getNode().(StrConst).getText() = name and