diff --git a/config/identical-files.json b/config/identical-files.json
index 5c801c387a1..144031d5a68 100644
--- a/config/identical-files.json
+++ b/config/identical-files.json
@@ -498,22 +498,6 @@
     "ruby/ql/lib/codeql/ruby/frameworks/data/internal/ApiGraphModelsExtensions.qll",
     "python/ql/lib/semmle/python/frameworks/data/internal/ApiGraphModelsExtensions.qll"
   ],
-  "TaintedFormatStringQuery Ruby/JS": [
-    "javascript/ql/lib/semmle/javascript/security/dataflow/TaintedFormatStringQuery.qll",
-    "ruby/ql/lib/codeql/ruby/security/TaintedFormatStringQuery.qll"
-  ],
-  "TaintedFormatStringCustomizations Ruby/JS": [
-    "javascript/ql/lib/semmle/javascript/security/dataflow/TaintedFormatStringCustomizations.qll",
-    "ruby/ql/lib/codeql/ruby/security/TaintedFormatStringCustomizations.qll"
-  ],
-  "HttpToFileAccessQuery JS/Ruby": [
-    "javascript/ql/lib/semmle/javascript/security/dataflow/HttpToFileAccessQuery.qll",
-    "ruby/ql/lib/codeql/ruby/security/HttpToFileAccessQuery.qll"
-  ],
-  "HttpToFileAccessCustomizations JS/Ruby": [
-    "javascript/ql/lib/semmle/javascript/security/dataflow/HttpToFileAccessCustomizations.qll",
-    "ruby/ql/lib/codeql/ruby/security/HttpToFileAccessCustomizations.qll"
-  ],
   "Typo database": [
     "javascript/ql/src/Expressions/TypoDatabase.qll",
     "ql/ql/src/codeql_ql/style/TypoDatabase.qll"