add library inputs as a source, and get minimal test to work

python/ql/lib/semmle/python/Frameworks.qll

@@ -51,6 +51,7 @@ private import semmle.python.frameworks.Simplejson
 private import semmle.python.frameworks.SqlAlchemy
 private import semmle.python.frameworks.Starlette
 private import semmle.python.frameworks.Stdlib
+private import semmle.python.frameworks.Setuptools
 private import semmle.python.frameworks.Toml
 private import semmle.python.frameworks.Tornado
 private import semmle.python.frameworks.Twisted

python/ql/lib/semmle/python/frameworks/Setuptools.qll

@@ -0,0 +1,71 @@
+/**
+ * Provides classes modeling package setup as defined by `setuptools`.
+ */
+
+private import python
+private import semmle.python.dataflow.new.DataFlow
+
+/** Provides models for the use of `setuptools` in setup scripts, and the APIs exported by the library defined using `setuptools`. */
+module Setuptools {
+  /**
+   * Gets a file that sets up a package using `setuptools` (or the deprecated `distutils`).
+   */
+  private File setupFile() {
+    // all of these might not be extracted, but the support is ready for when they are
+    result.getBaseName() = ["setup.py", "setup.cfg", "pyproject.toml"]
+  }
+
+  /**
+   * Gets a file or folder that is exported by a library.
+   */
+  private Container getALibraryExportedContainer() {
+    result = setupFile().getParent()
+    or
+    // child of a library exported container
+    result = getALibraryExportedContainer().getAChildContainer() and
+    (
+      // either any file
+      not result instanceof Folder
+      or
+      // or a folder with an __init__.py file
+      exists(result.(Folder).getFile("__init__.py"))
+    ) and
+    // that is not a test folder
+    not result.(Folder).getBaseName() = ["test", "tests", "testing"]
+  }
+
+  /**
+   * Gets an AST node that is exported by a library.
+   */
+  private AstNode getAnExportedLibraryFeature() {
+    result.(Module).getFile() = getALibraryExportedContainer()
+    or
+    result = getAnExportedLibraryFeature().(Module).getAStmt()
+    or
+    result = getAnExportedLibraryFeature().(ClassDef).getDefinedClass().getAMethod()
+    or
+    result = getAnExportedLibraryFeature().(ClassDef).getDefinedClass().getInitMethod()
+    or
+    result = getAnExportedLibraryFeature().(FunctionDef).getDefinedFunction()
+  }
+
+  /**
+   * Gets a public function (or __init__) that is exported by a library.
+   */
+  private Function getAnExportedFunction() {
+    result = getAnExportedLibraryFeature() and
+    (
+      result.isPublic()
+      or
+      result.isInitMethod()
+    )
+  }
+
+  /**
+   * Gets a parameter to a public function that is exported by a library.
+   */
+  DataFlow::ParameterNode getALibraryInput() {
+    result.getParameter() = getAnExportedFunction().getAnArg() and
+    not result.getParameter().isSelf()
+  }
+}

python/ql/lib/semmle/python/security/dataflow/UnsafeShellCommandConstructionCustomizations.qll

@@ -17,15 +17,17 @@ module UnsafeShellCommandConstruction {
   /** A source for shell command constructed from library input vulnerabilities. */
   abstract class Source extends DataFlow::Node { }
 
+  private import semmle.python.frameworks.Setuptools
+
   /** An input parameter to a gem seen as a source. */
   private class LibraryInputAsSource extends Source instanceof DataFlow::ParameterNode {
-    LibraryInputAsSource() {
-      none() // TODO: Do something here, put it in a shared library.
-    }
+    LibraryInputAsSource() { this = Setuptools::getALibraryInput() }
   }
 
   /** A sink for shell command constructed from library input vulnerabilities. */
   abstract class Sink extends DataFlow::Node {
+    Sink() { not this.asExpr() instanceof StrConst } // filter out string constants, makes testing easier
+
     /** Gets a description of how the string in this sink was constructed. */
     abstract string describe();
 
@@ -80,7 +82,6 @@ module UnsafeShellCommandConstruction {
    * where the resulting string ends up being executed as a shell command.
    */
   class StringConcatAsSink extends Sink {
-    // TODO: Add test.
     Concepts::SystemCommandExecution s;
     BinaryExpr add;
 

python/ql/test/query-tests/Security/CWE-078-UnsafeShellCommandConstruction/DataflowQueryTest.expected

@@ -0,0 +1,2 @@
+missingAnnotationOnSink
+failures

python/ql/test/query-tests/Security/CWE-078-UnsafeShellCommandConstruction/DataflowQueryTest.ql

@@ -0,0 +1,3 @@
+import python
+import experimental.dataflow.TestUtil.DataflowQueryTest
+import semmle.python.security.dataflow.UnsafeShellCommandConstructionQuery

python/ql/test/query-tests/Security/CWE-078-UnsafeShellCommandConstruction/UnsafeShellCommandConstruction.expected

@@ -0,0 +1,8 @@
+edges
+| src/unsafe_shell_test.py:4:22:4:25 | ControlFlowNode for name | src/unsafe_shell_test.py:5:25:5:28 | ControlFlowNode for name |
+nodes
+| src/unsafe_shell_test.py:4:22:4:25 | ControlFlowNode for name | semmle.label | ControlFlowNode for name |
+| src/unsafe_shell_test.py:5:25:5:28 | ControlFlowNode for name | semmle.label | ControlFlowNode for name |
+subpaths
+#select
+| src/unsafe_shell_test.py:5:15:5:28 | ControlFlowNode for BinaryExpr | src/unsafe_shell_test.py:4:22:4:25 | ControlFlowNode for name | src/unsafe_shell_test.py:5:25:5:28 | ControlFlowNode for name | This string concatenation which depends on $@ is later used in a $@. | src/unsafe_shell_test.py:4:22:4:25 | ControlFlowNode for name | library input | src/unsafe_shell_test.py:5:5:5:29 | ControlFlowNode for Attribute() | shell command |

python/ql/test/query-tests/Security/CWE-078-UnsafeShellCommandConstruction/UnsafeShellCommandConstruction.qlref

@@ -0,0 +1 @@
+Security/CWE-078/UnsafeShellCommandConstruction.ql

python/ql/test/query-tests/Security/CWE-078-UnsafeShellCommandConstruction/options

@@ -0,0 +1 @@
+semmle-extractor-options: --lang=3 --max-import-depth=0 -r src

python/ql/test/query-tests/Security/CWE-078-UnsafeShellCommandConstruction/src/unsafe_shell_test.py

@@ -0,0 +1,5 @@
+import os
+import subprocess
+
+def unsafe_shell_one(name):
+    os.system("ping " + name) # $result=BAD